Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

INTS6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 26512 integrator complex subunit 6 chr13 - 52026775 - 52032275 52027275 Transcription Factor Binding Sites   Download all TFBS in the INTS6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 52027297 52027312 8.0E-06 TAGCATATTTAAACAG 16 CUX1_CUT_DBD_monomeric_10_1 SELEX - 52028046 52028055 8.0E-06 TTATCGATAT 10 FOXJ2_forkhead_DBD_monomeric_8_1 SELEX - 52027811 52027818 5.0E-06 ATAAACAA 8 POU2F1_POU_DBD_dimeric_14_1 SELEX + 52027296 52027309 6.0E-06 TTAGCATATTTAAA 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 52027296 52027309 4.0E-06 TTTAAATATGCTAA 14 SPIC_ETS_full_monomeric_14_1 SELEX + 52028203 52028216 7.0E-06 AGAAAGCGGAAAAA 14 POU3F3_POU_DBD_monomeric_12_1 SELEX + 52025782 52025793 2.0E-06 TTGAATAAATAT 12 POU3F3_POU_DBD_monomeric_12_1 SELEX + 52027297 52027308 8.0E-06 TAGCATATTTAA 12 POU3F2_POU_DBD_monomeric_13_1 SELEX + 52025781 52025793 3.0E-06 CTTGAATAAATAT 13 POU3F2_POU_DBD_monomeric_13_1 SELEX + 52027296 52027308 4.0E-06 TTAGCATATTTAA 13 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 52027293 52027307 1.0E-06 TAAATATGCTAATGA 15 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 52027295 52027303 4.0E-06 TATGCTAAT 9 POU3F4_POU_DBD_monomeric_11_1 SELEX + 52025783 52025793 5.0E-06 TGAATAAATAT 11 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 52025783 52025793 5.0E-06 TGAATAAATAT 11 POU2F3_POU_DBD_monomeric_9_1 SELEX - 52027295 52027303 3.0E-06 TATGCTAAT 9 EWSR1-FLI1_MA0149.1 JASPAR + 52026075 52026092 0.0E+00 GAAGGGAAGGGAGGAAAG 18 EWSR1-FLI1_MA0149.1 JASPAR + 52026079 52026096 5.0E-06 GGAAGGGAGGAAAGGGGG 18 POU1F1_POU_DBD_monomeric_14_1 SELEX - 52027292 52027305 0.0E+00 AATATGCTAATGAA 14 POU2F2_POU_DBD_monomeric_11_1 SELEX - 52027294 52027304 1.0E-06 ATATGCTAATG 11 POU3F4_POU_DBD_monomeric_9_1 SELEX - 52027295 52027303 3.0E-06 TATGCTAAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 52027295 52027303 3.0E-06 TATGCTAAT 9 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX - 52026036 52026051 3.0E-06 CCCCGCCCCCCCATTC 16 CUX1_CUT_DBD_dimeric_18_1 SELEX - 52028048 52028065 6.0E-06 AACAAACCATTTATCGAT 18 POU3F3_POU_DBD_monomeric_13_1 SELEX - 52027293 52027305 0.0E+00 AATATGCTAATGA 13 CUX2_CUT_DBD_monomeric_10_1 SELEX - 52028046 52028055 6.0E-06 TTATCGATAT 10 FIGLA_bHLH_DBD_dimeric_10_1 SELEX + 52027654 52027663 4.0E-06 AACACCTGGT 10 PAX3_PAX_DBD_dimeric_10_1 SELEX - 52028186 52028195 9.0E-06 TAATGGATTA 10 RELA_MA0107.1 JASPAR - 52026838 52026847 5.0E-06 GGGAGTTTCC 10 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 52027296 52027309 4.0E-06 TTAGCATATTTAAA 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 52027296 52027309 3.0E-06 TTTAAATATGCTAA 14 SP1_MA0079.2 JASPAR - 52025953 52025962 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 52026011 52026020 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 52026042 52026051 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 52026418 52026427 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 52027467 52027476 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 52027791 52027800 3.0E-06 CCCCTCCCCC 10 POU2F3_POU_DBD_dimeric_12_1 SELEX + 52027297 52027308 9.0E-06 TAGCATATTTAA 12 POU2F3_POU_DBD_dimeric_12_1 SELEX - 52027297 52027308 6.0E-06 TTAAATATGCTA 12 ZIC3_C2H2_full_monomeric_15_1 SELEX - 52026000 52026014 7.0E-06 CCCCACCCGCTGCGC 15 znf143_MA0088.1 JASPAR + 52025791 52025810 1.0E-06 TATCCCCCACAGTTCATTGC 20 SP4_C2H2_full_monomeric_17_1 SELEX - 52027429 52027445 6.0E-06 CCGGCCCCGCCCCTTCC 17 SP1_C2H2_DBD_monomeric_11_1 SELEX + 52027017 52027027 7.0E-06 ACCCCACCCCC 11 MZF1_5-13_MA0057.1 JASPAR + 52028029 52028038 8.0E-06 CTAGGGGGAA 10 POU3F1_POU_DBD_monomeric_12_1 SELEX - 52027293 52027304 0.0E+00 ATATGCTAATGA 12 CUX2_CUT_DBD_dimeric_18_1 SELEX - 52028048 52028065 4.0E-06 AACAAACCATTTATCGAT 18 POU3F1_POU_DBD_monomeric_12_2 SELEX + 52025782 52025793 4.0E-06 TTGAATAAATAT 12 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX + 52027292 52027308 5.0E-06 TTCATTAGCATATTTAA 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 52027292 52027308 2.0E-06 TTAAATATGCTAATGAA 17 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 52027297 52027308 9.0E-06 TAGCATATTTAA 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 52027297 52027308 6.0E-06 TTAAATATGCTA 12 Pou5f1_MA0142.1 JASPAR - 52027295 52027309 6.0E-06 TTTAAATATGCTAAT 15 POU2F1_POU_DBD_monomeric_12_1 SELEX - 52027294 52027305 0.0E+00 AATATGCTAATG 12 FOXO6_forkhead_DBD_putatively-multimeric_14_1 SELEX + 52026341 52026354 6.0E-06 GCTCCCCACACACC 14 Foxj3_forkhead_DBD_monomeric_8_1 SELEX - 52027811 52027818 5.0E-06 ATAAACAA 8 POU3F3_POU_DBD_dimeric_12_1 SELEX + 52025782 52025793 7.0E-06 TTGAATAAATAT 12 POU3F2_POU_DBD_monomeric_12_1 SELEX - 52027293 52027304 0.0E+00 ATATGCTAATGA 12 FOXB1_forkhead_DBD_monomeric_11_1 SELEX + 52025783 52025793 8.0E-06 TGAATAAATAT 11 DPRX_homeodomain_DBD_monomeric_10_1 SELEX - 52028184 52028193 6.0E-06 ATGGATTATC 10 PAX7_PAX_full_dimeric_10_1 SELEX + 52028186 52028195 5.0E-06 TAATCCATTA 10 PAX7_PAX_full_dimeric_10_1 SELEX - 52028186 52028195 6.0E-06 TAATGGATTA 10 ZNF784_C2H2_full_monomeric_10_1 SELEX - 52028464 52028473 6.0E-06 ATACCTACCT 10 V_NFKAPPAB65_01_M00052 TRANSFAC - 52026838 52026847 7.0E-06 GGGAGTTTCC 10 V_AREB6_01_M00412 TRANSFAC + 52026150 52026162 3.0E-06 CATATACCTGTCT 13 V_HNF3B_01_M00131 TRANSFAC - 52025783 52025797 5.0E-06 GGGGATATTTATTCA 15 V_KLF15_Q2_M01714 TRANSFAC + 52027057 52027070 1.0E-06 GAAGAGGGGAGTGG 14 V_E2A_Q6_01_M02088 TRANSFAC - 52025632 52025644 1.0E-06 GGACAGCTGCAGG 13 V_NFKB_Q6_01_M00774 TRANSFAC + 52026833 52026848 7.0E-06 TGAGAGGAAACTCCCC 16 V_FXR_Q3_M00631 TRANSFAC + 52025778 52025791 3.0E-06 TAACTTGAATAAAT 14 V_BTEB3_Q5_M01865 TRANSFAC + 52027072 52027084 7.0E-06 CTGAGGGAAGATT 13 V_YY1_02_M00069 TRANSFAC + 52025836 52025855 3.0E-06 TGTCGGCCATGTTGATAGCA 20 V_SREBP2_Q6_M01177 TRANSFAC - 52027604 52027615 5.0E-06 CGGCCACCTCAC 12 V_STAT3STAT3_Q3_M01220 TRANSFAC - 52028250 52028263 2.0E-06 GTTACGGGAAACCC 14 V_FOXO4_02_M00476 TRANSFAC + 52027808 52027821 6.0E-06 AGGTTGTTTATGAC 14 V_MMEF2_Q6_M00405 TRANSFAC - 52027297 52027312 2.0E-06 CTGTTTAAATATGCTA 16 V_POU5F1_02_M02245 TRANSFAC - 52027295 52027309 6.0E-06 TTTAAATATGCTAAT 15 V_MAFB_03_M02879 TRANSFAC + 52025779 52025793 4.0E-06 AACTTGAATAAATAT 15 V_SP1_Q6_01_M00931 TRANSFAC + 52027433 52027442 4.0E-06 GGGGCGGGGC 10 V_EGR_Q6_M00807 TRANSFAC - 52026278 52026288 3.0E-06 GTGGGGGCGGC 11 V_EGR_Q6_M00807 TRANSFAC + 52027465 52027475 6.0E-06 GTGGGGGCGGG 11 V_OCT1_01_M00135 TRANSFAC - 52027290 52027308 0.0E+00 TTAAATATGCTAATGAAAG 19 V_EVI1_02_M00079 TRANSFAC + 52025668 52025678 8.0E-06 TGACAAGACCA 11 V_CEBP_01_M00159 TRANSFAC - 52028096 52028108 1.0E-06 TCTTTGGTAAGAT 13 V_POU2F3_01_M01476 TRANSFAC - 52027291 52027306 0.0E+00 AAATATGCTAATGAAA 16 V_POU1F1_Q6_M00744 TRANSFAC + 52025782 52025791 5.0E-06 TTGAATAAAT 10 V_POU3F2_02_M00464 TRANSFAC - 52027295 52027304 1.0E-06 ATATGCTAAT 10 V_MAF_Q6_M00648 TRANSFAC + 52027058 52027073 4.0E-06 AAGAGGGGAGTGGGCT 16 V_GABPA_04_M02858 TRANSFAC - 52027568 52027583 5.0E-06 CCTTTTTCCCTCCCCT 16 V_SP1_03_M02281 TRANSFAC - 52025953 52025962 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 52026011 52026020 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 52026042 52026051 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 52026418 52026427 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 52027467 52027476 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 52027791 52027800 3.0E-06 CCCCTCCCCC 10 V_OCT_C_M00210 TRANSFAC + 52027292 52027304 0.0E+00 TTCATTAGCATAT 13 V_SP1_02_M01303 TRANSFAC + 52026043 52026053 3.0E-06 GGGGCGGGGAG 11 V_SP1_02_M01303 TRANSFAC - 52027011 52027021 5.0E-06 GGGGTGGGGAG 11 V_SP1_02_M01303 TRANSFAC - 52027016 52027026 5.0E-06 GGGGTGGGGTG 11 V_SP1_02_M01303 TRANSFAC + 52027468 52027478 8.0E-06 GGGGCGGGGGC 11 V_PU1_Q4_M01172 TRANSFAC - 52027793 52027811 3.0E-06 ACCTCTCACTTCCCCTCCC 19 V_FOXP3_01_M01599 TRANSFAC - 52027811 52027818 5.0E-06 ATAAACAA 8 V_ZFP691_03_M02833 TRANSFAC + 52026850 52026866 6.0E-06 GACCCAGTGCTCCCCGT 17 V_TCFAP2E_04_M02926 TRANSFAC + 52025779 52025792 4.0E-06 AACTTGAATAAATA 14 V_CDX_Q5_M00991 TRANSFAC + 52028097 52028114 5.0E-06 TCTTACCAAAGAAATAAC 18 V_NRSE_B_M00325 TRANSFAC - 52028313 52028333 3.0E-06 AGCAGCTTGACAGAGAGTGCC 21 V_GC_01_M00255 TRANSFAC - 52027219 52027232 8.0E-06 CAGGGGCGGAGCCT 14 V_GC_01_M00255 TRANSFAC + 52027431 52027444 0.0E+00 AAGGGGCGGGGCCG 14 V_SPI1_03_M02078 TRANSFAC + 52027796 52027805 1.0E-05 AGGGGAAGTG 10 V_FKLF_Q5_M01837 TRANSFAC + 52025960 52025969 2.0E-06 GGGGTGGGAG 10 V_MYCMAX_02_M00123 TRANSFAC - 52027244 52027255 9.0E-06 TATCACGTGGCT 12 V_KROX_Q6_M00982 TRANSFAC - 52025954 52025967 8.0E-06 CCCACCCCCTCCCC 14 V_KROX_Q6_M00982 TRANSFAC + 52026873 52026886 1.0E-05 CCCGCCTCCGCCTC 14 V_KROX_Q6_M00982 TRANSFAC - 52027462 52027475 1.0E-06 CCCGCCCCCACCTC 14 V_ZBP89_Q4_M01816 TRANSFAC - 52026010 52026019 4.0E-06 CCCTCCCCCA 10 V_ZBP89_Q4_M01816 TRANSFAC - 52026417 52026426 4.0E-06 CCCTCCCCCA 10 V_AMEF2_Q6_M00403 TRANSFAC - 52027295 52027312 2.0E-06 CTGTTTAAATATGCTAAT 18 V_SP1_Q6_M00196 TRANSFAC + 52027431 52027443 1.0E-06 AAGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC + 52027466 52027478 6.0E-06 TGGGGGCGGGGGC 13 V_MAZ_Q6_01_M02023 TRANSFAC + 52026011 52026024 2.0E-06 GGGGGAGGGGAGCA 14 V_MAZ_Q6_01_M02023 TRANSFAC + 52026042 52026055 2.0E-06 GGGGGCGGGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 52026081 52026094 6.0E-06 AAGGGAGGAAAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 52027014 52027027 4.0E-06 GGGGGTGGGGTGGG 14 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 52025782 52025792 8.0E-06 TATTTATTCAA 11 V_HOX13_01_M00023 TRANSFAC + 52028385 52028414 4.0E-06 TTTTCTCAAACACATTAGTTGAAAAACTGA 30 V_XBP1_02_M01770 TRANSFAC - 52026630 52026640 6.0E-06 ATAGACACGTC 11 V_OCT1_04_M00138 TRANSFAC - 52027288 52027310 0.0E+00 GTTTAAATATGCTAATGAAAGGA 23 V_SP1SP3_Q4_M01219 TRANSFAC + 52026880 52026890 5.0E-06 CCGCCTCCTCC 11 V_USF_01_M00121 TRANSFAC + 52027243 52027256 6.0E-06 GAGCCACGTGATAC 14 V_USF_01_M00121 TRANSFAC - 52027243 52027256 6.0E-06 GTATCACGTGGCTC 14 V_RREB1_01_M00257 TRANSFAC + 52027013 52027026 1.0E-06 CCCCACCCCACCCC 14 V_KLF7_03_M02773 TRANSFAC - 52027430 52027445 9.0E-06 CCGGCCCCGCCCCTTC 16 V_STAF_02_M00264 TRANSFAC + 52025792 52025812 5.0E-06 ATCCCCCACAGTTCATTGCTG 21 V_PPARA_02_M00518 TRANSFAC + 52027551 52027569 1.0E-06 GGAGGTGATAGGGGTCGAG 19 V_OCT_Q6_M00795 TRANSFAC + 52027293 52027303 8.0E-06 TCATTAGCATA 11 V_NEUROD_02_M01288 TRANSFAC + 52025633 52025644 1.0E-06 CTGCAGCTGTCC 12 V_SP4_Q5_M01273 TRANSFAC - 52026042 52026052 9.0E-06 TCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC + 52026468 52026478 7.0E-06 CCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 52026751 52026761 7.0E-06 CCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 52027432 52027442 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC - 52027467 52027477 5.0E-06 CCCCCGCCCCC 11 V_YY1_03_M02044 TRANSFAC + 52025838 52025849 7.0E-06 TCGGCCATGTTG 12 V_OCT2_01_M01368 TRANSFAC - 52027291 52027306 0.0E+00 AAATATGCTAATGAAA 16 V_MYOGNF1_01_M00056 TRANSFAC + 52026899 52026927 7.0E-06 TGCCCGCTGGGGCGGGCGCCCAGCCGTCT 29 V_MEIS1_01_M00419 TRANSFAC - 52027955 52027966 4.0E-06 CAATGACAGGGC 12 V_DMRT7_01_M01151 TRANSFAC - 52027977 52027990 7.0E-06 TTGCTTCCTTTTTG 14 V_VDR_Q6_M00961 TRANSFAC - 52026615 52026626 3.0E-06 CTCTATGAACCA 12 V_STAT_01_M00223 TRANSFAC + 52028254 52028262 7.0E-06 TTCCCGTAA 9 V_ZFP281_01_M01597 TRANSFAC + 52025952 52025962 7.0E-06 CGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 52026010 52026020 1.0E-06 TGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 52026417 52026427 1.0E-06 TGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 52027466 52027476 6.0E-06 TGGGGGCGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 52027790 52027800 7.0E-06 CGGGGGAGGGG 11 V_EGR1_06_M02744 TRANSFAC - 52026037 52026050 2.0E-06 CCCGCCCCCCCATT 14 V_ZFP281_04_M02831 TRANSFAC - 52026008 52026022 2.0E-06 CTCCCCTCCCCCACC 15 V_ZFP281_04_M02831 TRANSFAC - 52026415 52026429 0.0E+00 ACCCCCTCCCCCACC 15 V_HFH3_01_M00289 TRANSFAC - 52025783 52025795 9.0E-06 GGATATTTATTCA 13 V_EWSR1FLI1_01_M02252 TRANSFAC + 52026075 52026092 0.0E+00 GAAGGGAAGGGAGGAAAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 52026079 52026096 5.0E-06 GGAAGGGAGGAAAGGGGG 18 V_YY1_01_M00059 TRANSFAC - 52028048 52028064 7.0E-06 ACAAACCATTTATCGAT 17 V_FOXO1_01_M00473 TRANSFAC - 52027810 52027819 7.0E-06 CATAAACAAC 10 V_PIT1_Q6_M00802 TRANSFAC - 52026544 52026561 1.0E-05 CCTTCATGAAGGTACCGA 18 V_SP1_Q2_01_M00933 TRANSFAC - 52027432 52027441 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC - 52027467 52027476 4.0E-06 CCCCGCCCCC 10 V_ARP1_01_M00155 TRANSFAC + 52027223 52027238 8.0E-06 TCCGCCCCTGACACGT 16 V_FOXO4_01_M00472 TRANSFAC - 52027808 52027818 2.0E-06 ATAAACAACCT 11 V_UF1H3BETA_Q6_M01068 TRANSFAC + 52026008 52026021 0.0E+00 GGTGGGGGAGGGGA 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 52026415 52026428 1.0E-06 GGTGGGGGAGGGGG 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 52027788 52027801 0.0E+00 GGCGGGGGAGGGGA 14 V_SP1_Q4_01_M00932 TRANSFAC + 52027431 52027443 0.0E+00 AAGGGGCGGGGCC 13 V_RNF96_01_M01199 TRANSFAC + 52027680 52027689 7.0E-06 GCCCGCAGCC 10 V_STAT1_Q6_M01823 TRANSFAC - 52028253 52028262 3.0E-06 TTACGGGAAA 10 V_OCT4_01_M01125 TRANSFAC - 52027295 52027309 3.0E-06 TTTAAATATGCTAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.