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PTCD1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 26024 pentatricopeptide repeat domain 1 chr7 - 99035962 - 99041462 99036462 Transcription Factor Binding Sites   Download all TFBS in the PTCD1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX - 99039975 99039983 9.0E-06 TTAATAAAA 9 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX - 99039974 99039983 5.0E-06 TTAATAAAAA 10 ESR2_MA0258.1 JASPAR + 99039836 99039853 4.0E-06 CAAGGTCAGTTTAGTCTG 18 FOXL1_forkhead_full_dimeric_13_1 SELEX - 99039973 99039985 4.0E-06 TGTTAATAAAAAA 13 Esrrb_MA0141.1 JASPAR + 99039832 99039843 2.0E-06 ATGCCAAGGTCA 12 Tp73_p53l_DBD_dimeric_18_1 SELEX + 99038114 99038131 4.0E-06 GGCATGCACCAACACGCC 18 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX - 99038214 99038231 8.0E-06 GAGGTAAAAGGATCACTT 18 Pax4_MA0068.1 JASPAR - 99039933 99039962 1.0E-06 GAAAAAAAAAGCACAGCCTTTCATTCCCAC 30 Pax4_MA0068.1 JASPAR - 99039949 99039978 4.0E-06 AAAAAAGAAAAGAAAAGAAAAAAAAAGCAC 30 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 99039975 99039984 8.0E-06 GTTAATAAAA 10 NKX3-1_homeodomain_full_monomeric_9_1 SELEX - 99039755 99039763 5.0E-06 CCCACTTAA 9 TCF4_bHLH_full_dimeric_10_1 SELEX + 99040015 99040024 3.0E-06 CACACCTGTA 10 Tcf21_bHLH_DBD_dimeric_14_1 SELEX + 99039886 99039899 4.0E-06 AGAACAGCTGGTCC 14 Tcf21_bHLH_DBD_dimeric_14_1 SELEX - 99039886 99039899 5.0E-06 GGACCAGCTGTTCT 14 ATF4_bZIP_DBD_dimeric_13_1 SELEX - 99038170 99038182 5.0E-06 ACATGATGAAATA 13 FEV_MA0156.1 JASPAR + 99036709 99036716 1.0E-05 CAGGAAAT 8 TFAP4_bHLH_full_dimeric_10_1 SELEX + 99039888 99039897 7.0E-06 AACAGCTGGT 10 TFAP4_bHLH_full_dimeric_10_1 SELEX - 99039888 99039897 4.0E-06 ACCAGCTGTT 10 Pou5f1_MA0142.1 JASPAR + 99039626 99039640 0.0E+00 TTTTGAGATGCAAAT 15 CPEB1_RRM_full_monomeric_8_1 SELEX - 99039974 99039981 4.0E-06 AATAAAAA 8 ZNF524_C2H2_full_monomeric_14_1 SELEX + 99036844 99036857 0.0E+00 CTCGAACCCGGGAC 14 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX - 99039974 99039984 3.0E-06 GTTAATAAAAA 11 Sox2_MA0143.1 JASPAR + 99039625 99039639 2.0E-06 TTTTTGAGATGCAAA 15 MSC_bHLH_full_dimeric_10_1 SELEX + 99039888 99039897 9.0E-06 AACAGCTGGT 10 MSC_bHLH_full_dimeric_10_1 SELEX - 99039888 99039897 3.0E-06 ACCAGCTGTT 10 NFE2L2_MA0150.1 JASPAR + 99039732 99039742 9.0E-06 GTGATTTAGCA 11 TBX1_TBX_DBD_dimeric_20_1 SELEX - 99040014 99040033 9.0E-06 TGCTGGGATTACAGGTGTGA 20 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX - 99039974 99039984 4.0E-06 GTTAATAAAAA 11 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 99039979 99039992 9.0E-06 ATTAACAAGCAACA 14 V_FOXP1_01_M00987 TRANSFAC + 99039954 99039973 1.0E-06 TTTTTTTTCTTTTCTTTTCT 20 V_FOXP1_01_M00987 TRANSFAC + 99039959 99039978 2.0E-06 TTTCTTTTCTTTTCTTTTTT 20 V_DBX1_01_M01483 TRANSFAC - 99039970 99039986 2.0E-06 TTGTTAATAAAAAAGAA 17 V_TCF3_01_M01594 TRANSFAC + 99039727 99039739 9.0E-06 CTTTTGTGATTTA 13 V_TCF3_01_M01594 TRANSFAC + 99039962 99039974 9.0E-06 CTTTTCTTTTCTT 13 V_TCF3_01_M01594 TRANSFAC + 99039967 99039979 2.0E-06 CTTTTCTTTTTTA 13 V_BCL6_Q3_01_M02085 TRANSFAC + 99039707 99039716 7.0E-06 CTTCCAAGAA 10 V_CDX2_Q5_01_M01659 TRANSFAC - 99039973 99039983 5.0E-06 TTAATAAAAAA 11 V_BACH2_01_M00490 TRANSFAC + 99039594 99039604 2.0E-06 CGTGAGTCACC 11 V_BTEB3_Q5_M01865 TRANSFAC + 99036606 99036618 7.0E-06 GCGAAGGAGGAGT 13 V_BTEB3_Q5_M01865 TRANSFAC - 99036952 99036964 0.0E+00 TAGAGGGAGGAGT 13 V_BTEB3_Q5_M01865 TRANSFAC - 99037047 99037059 3.0E-06 GAGTGGGAAGAGT 13 TAL1_TCF3_MA0091.1 JASPAR + 99039886 99039897 3.0E-06 AGAACAGCTGGT 12 TAL1_TCF3_MA0091.1 JASPAR - 99039888 99039899 6.0E-06 GGACCAGCTGTT 12 V_HMGIY_Q3_M01010 TRANSFAC + 99038131 99038145 6.0E-06 CTGGCAAATTTTTTT 15 V_EVI1_04_M00081 TRANSFAC - 99039954 99039968 1.0E-06 AGAAAAGAAAAAAAA 15 V_EVI1_04_M00081 TRANSFAC - 99039959 99039973 0.0E+00 AGAAAAGAAAAGAAA 15 V_EVI1_04_M00081 TRANSFAC - 99039964 99039978 1.0E-06 AAAAAAGAAAAGAAA 15 V_EVI1_04_M00081 TRANSFAC - 99039968 99039982 5.0E-06 TAATAAAAAAGAAAA 15 V_BCL6_01_M01183 TRANSFAC + 99039955 99039970 1.0E-06 TTTTTTTCTTTTCTTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 99038131 99038142 8.0E-06 AAAATTTGCCAG 12 V_ETS_B_M00340 TRANSFAC + 99036707 99036720 7.0E-06 TGCAGGAAATCATC 14 V_POU5F1_02_M02245 TRANSFAC + 99039626 99039640 0.0E+00 TTTTGAGATGCAAAT 15 V_IRF_Q6_01_M00972 TRANSFAC - 99039968 99039978 6.0E-06 AAAAAAGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC - 99039965 99039980 5.0E-06 ATAAAAAAGAAAAGAA 16 V_NKX25_Q6_M02108 TRANSFAC + 99036310 99036320 0.0E+00 CTCACTTGAAG 11 V_AP4_Q6_M00176 TRANSFAC + 99039888 99039897 8.0E-06 AACAGCTGGT 10 V_PITX2_Q6_M02114 TRANSFAC + 99040021 99040030 1.0E-06 TGTAATCCCA 10 V_HEN1_01_M00068 TRANSFAC - 99039672 99039693 6.0E-06 CTAGGACACAGCTGAGGTTATA 22 V_HOXD13_01_M01404 TRANSFAC - 99039971 99039986 3.0E-06 TTGTTAATAAAAAAGA 16 V_GM497_04_M02864 TRANSFAC - 99036613 99036628 1.0E-06 CGCCGCACACACTCCT 16 V_TCFAP2E_04_M02926 TRANSFAC - 99038137 99038150 3.0E-06 CACACAAAAAAATT 14 V_TCFAP2E_04_M02926 TRANSFAC - 99039952 99039965 6.0E-06 AAAGAAAAAAAAAG 14 V_TCFAP2E_04_M02926 TRANSFAC - 99039953 99039966 1.0E-06 AAAAGAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 99039954 99039967 2.0E-06 GAAAAGAAAAAAAA 14 V_PAX_Q6_M00808 TRANSFAC + 99036304 99036314 1.0E-06 CAGGAACTCAC 11 V_AR_03_M00956 TRANSFAC - 99039880 99039906 5.0E-06 GCTCCAGGGACCAGCTGTTCTGATGAG 27 V_STAT4_Q4_M01666 TRANSFAC + 99039708 99039721 0.0E+00 TTCCAAGAAGCCAA 14 V_PAX5_02_M00144 TRANSFAC - 99038118 99038145 2.0E-06 AAAAAAATTTGCCAGGCGTGTTGGTGCA 28 V_RPC155_01_M01798 TRANSFAC - 99036841 99036856 4.0E-06 TCCCGGGTTCGAGTCG 16 V_RPC155_01_M01798 TRANSFAC - 99038194 99038209 0.0E+00 CCAGGAGTTCAAGACC 16 V_ELF4_04_M02850 TRANSFAC - 99039968 99039984 2.0E-06 GTTAATAAAAAAGAAAA 17 V_LMX1_01_M01409 TRANSFAC - 99039971 99039987 7.0E-06 CTTGTTAATAAAAAAGA 17 V_ZFP105_03_M02827 TRANSFAC - 99039950 99039964 9.0E-06 AAGAAAAAAAAAGCA 15 V_ZFP105_03_M02827 TRANSFAC - 99039967 99039981 2.0E-06 AATAAAAAAGAAAAG 15 V_ZFP105_03_M02827 TRANSFAC - 99039970 99039984 3.0E-06 GTTAATAAAAAAGAA 15 V_RFX1_01_M00280 TRANSFAC + 99039977 99039993 7.0E-06 TTATTAACAAGCAACAT 17 V_IRF2_01_M00063 TRANSFAC - 99036443 99036455 5.0E-06 GAAACCTGAAACC 13 V_CEBPD_Q6_M00621 TRANSFAC - 99038027 99038038 3.0E-06 GATTGCGTCACT 12 V_IRF_Q6_M00772 TRANSFAC + 99039954 99039968 5.0E-06 TTTTTTTTCTTTTCT 15 V_IRF_Q6_M00772 TRANSFAC + 99039959 99039973 6.0E-06 TTTCTTTTCTTTTCT 15 V_IRF_Q6_M00772 TRANSFAC + 99039964 99039978 3.0E-06 TTTCTTTTCTTTTTT 15 V_NFE4_Q5_M02105 TRANSFAC + 99036880 99036891 5.0E-06 CTCCCTCGCCTC 12 V_OCT1_04_M00138 TRANSFAC - 99039966 99039988 4.0E-06 GCTTGTTAATAAAAAAGAAAAGA 23 V_GR_01_M00955 TRANSFAC - 99039880 99039906 4.0E-06 GCTCCAGGGACCAGCTGTTCTGATGAG 27 V_AP4_Q5_M00175 TRANSFAC + 99039888 99039897 8.0E-06 AACAGCTGGT 10 V_SOX12_04_M02900 TRANSFAC - 99038138 99038153 3.0E-06 ATACACACAAAAAAAT 16 V_GRE_C_M00205 TRANSFAC - 99039885 99039900 1.0E-06 GGGACCAGCTGTTCTG 16 V_DAX1_01_M01248 TRANSFAC + 99039830 99039849 9.0E-06 TGATGCCAAGGTCAGTTTAG 20 V_ARID3A_04_M02735 TRANSFAC - 99039971 99039987 7.0E-06 CTTGTTAATAAAAAAGA 17 V_TBP_06_M02814 TRANSFAC + 99039970 99039985 1.0E-05 TTCTTTTTTATTAACA 16 V_STAT3_03_M01595 TRANSFAC - 99039703 99039718 9.0E-06 GCTTCTTGGAAGCAAG 16 V_OCT4_02_M01124 TRANSFAC + 99036742 99036756 1.0E-05 TTTGACTTGGAGATC 15 V_OCT4_02_M01124 TRANSFAC + 99039627 99039641 0.0E+00 TTTGAGATGCAAATG 15 V_ICSBP_Q6_M00699 TRANSFAC - 99036442 99036453 6.0E-06 AACCTGAAACCA 12 V_SF1_Q6_01_M01132 TRANSFAC - 99039835 99039843 7.0E-06 TGACCTTGG 9 V_TFIII_Q6_M00706 TRANSFAC - 99036955 99036963 6.0E-06 AGAGGGAGG 9 V_MTF1_06_M02882 TRANSFAC - 99039952 99039965 2.0E-06 AAAGAAAAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC - 99039955 99039968 1.0E-06 AGAAAAGAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 99039965 99039978 7.0E-06 AAAAAAGAAAAGAA 14 V_MTF1_06_M02882 TRANSFAC - 99039969 99039982 3.0E-06 TAATAAAAAAGAAA 14 V_MTF1_06_M02882 TRANSFAC - 99039972 99039985 9.0E-06 TGTTAATAAAAAAG 14 V_T3R_01_M00239 TRANSFAC - 99039640 99039655 8.0E-06 CAGGGAGGTCACTCCA 16 V_NKX25_03_M01414 TRANSFAC - 99039751 99039766 7.0E-06 AAGCCCACTTAACATG 16 V_TAL1_01_M01591 TRANSFAC + 99039958 99039970 5.0E-06 TTTTCTTTTCTTT 13 V_TAL1_01_M01591 TRANSFAC + 99039963 99039975 5.0E-06 TTTTCTTTTCTTT 13 V_AREB6_02_M00413 TRANSFAC + 99040014 99040025 6.0E-06 TCACACCTGTAA 12 V_LUN1_01_M00480 TRANSFAC - 99038092 99038108 3.0E-06 TCCCAGCTACTTGGGAG 17 V_EBNA1_01_M01745 TRANSFAC + 99039941 99039956 8.0E-06 GAAAGGCTGTGCTTTT 16 V_GFI1B_01_M01058 TRANSFAC - 99039728 99039739 1.0E-05 TAAATCACAAAA 12 V_TCF7_04_M02921 TRANSFAC + 99039972 99039986 2.0E-06 CTTTTTTATTAACAA 15 V_ZFP206_01_M01742 TRANSFAC + 99036406 99036416 4.0E-06 CGCGCAGGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 99036407 99036417 8.0E-06 TGCGCCTGCGC 11 V_BDP1_01_M01796 TRANSFAC + 99038194 99038205 2.0E-06 GGTCTTGAACTC 12 V_RBPJK_01_M01112 TRANSFAC + 99039930 99039940 1.0E-05 ACTGTGGGAAT 11 V_PITX2_Q2_M00482 TRANSFAC + 99040021 99040031 1.0E-06 TGTAATCCCAG 11 V_STAT6_02_M00500 TRANSFAC - 99036710 99036717 1.0E-05 GATTTCCT 8 V_TBX5_Q5_M01044 TRANSFAC + 99040013 99040022 3.0E-06 CTCACACCTG 10 V_P63_01_M01656 TRANSFAC + 99038113 99038132 6.0E-06 AGGCATGCACCAACACGCCT 20 V_P63_01_M01656 TRANSFAC - 99038113 99038132 3.0E-06 AGGCGTGTTGGTGCATGCCT 20 V_SOX2_01_M02246 TRANSFAC + 99039625 99039639 2.0E-06 TTTTTGAGATGCAAA 15 V_SRF_06_M02916 TRANSFAC - 99039949 99039965 4.0E-06 AAAGAAAAAAAAAGCAC 17 V_SRF_06_M02916 TRANSFAC - 99039950 99039966 2.0E-06 AAAAGAAAAAAAAAGCA 17 V_SRF_06_M02916 TRANSFAC - 99039951 99039967 3.0E-06 GAAAAGAAAAAAAAAGC 17 V_SRF_06_M02916 TRANSFAC - 99039953 99039969 7.0E-06 AAGAAAAGAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 99039964 99039980 6.0E-06 ATAAAAAAGAAAAGAAA 17 V_SRF_06_M02916 TRANSFAC - 99039965 99039981 1.0E-05 AATAAAAAAGAAAAGAA 17 V_SRF_06_M02916 TRANSFAC - 99039968 99039984 6.0E-06 GTTAATAAAAAAGAAAA 17 V_SATB1_01_M01232 TRANSFAC + 99039975 99039986 6.0E-06 TTTTATTAACAA 12 V_YY1_01_M00059 TRANSFAC - 99039795 99039811 3.0E-06 AGTAACCATTTTAGAAT 17 V_PR_02_M00957 TRANSFAC - 99039880 99039906 4.0E-06 GCTCCAGGGACCAGCTGTTCTGATGAG 27 V_IRF1_01_M00062 TRANSFAC - 99036443 99036455 1.0E-05 GAAACCTGAAACC 13 V_PIT1_Q6_M00802 TRANSFAC + 99039968 99039985 1.0E-06 TTTTCTTTTTTATTAACA 18 V_MEF2_01_M00006 TRANSFAC - 99039803 99039818 7.0E-06 CTCTACAAGTAACCAT 16 V_ARP1_01_M00155 TRANSFAC + 99038199 99038214 4.0E-06 TGAACTCCTGGGCTCA 16 V_ARP1_01_M00155 TRANSFAC + 99039868 99039883 5.0E-06 TGAATTCCTGGACTCA 16 V_NFE2L2_01_M02263 TRANSFAC + 99039732 99039742 9.0E-06 GTGATTTAGCA 11 V_HMEF2_Q6_M00406 TRANSFAC - 99039803 99039818 9.0E-06 CTCTACAAGTAACCAT 16 V_MAFK_04_M02880 TRANSFAC - 99038130 99038144 4.0E-06 AAAAAATTTGCCAGG 15 V_SP1_Q4_01_M00932 TRANSFAC - 99036929 99036941 8.0E-06 AAGGGGAGGGGTC 13 V_HOXD10_01_M01375 TRANSFAC - 99039970 99039986 6.0E-06 TTGTTAATAAAAAAGAA 17 V_FEV_01_M02269 TRANSFAC + 99036709 99036716 1.0E-05 CAGGAAAT 8 V_GLIS2_04_M02863 TRANSFAC - 99039971 99039984 8.0E-06 GTTAATAAAAAAGA 14 V_GLIS2_04_M02863 TRANSFAC - 99039974 99039987 1.0E-06 CTTGTTAATAAAAA 14 V_STAT1_05_M01260 TRANSFAC - 99039698 99039719 3.0E-06 GGCTTCTTGGAAGCAAGCAGAT 22 V_SEF1_C_M00214 TRANSFAC + 99037023 99037041 5.0E-06 AACTCCCTCATCTGTGGTC 19 V_PAX4_04_M00380 TRANSFAC - 99039930 99039959 5.0E-06 AAAAAAAGCACAGCCTTTCATTCCCACAGT 30 V_SMAD1_01_M01590 TRANSFAC - 99039726 99039737 4.0E-06 AATCACAAAAGA 12 V_SMAD1_01_M01590 TRANSFAC - 99039961 99039972 8.0E-06 GAAAAGAAAAGA 12 V_SMAD1_01_M01590 TRANSFAC - 99039966 99039977 1.0E-06 AAAAAGAAAAGA 12 V_ESR2_01_M02377 TRANSFAC + 99039836 99039853 4.0E-06 CAAGGTCAGTTTAGTCTG 18 V_NANOG_02_M01247 TRANSFAC - 99039952 99039971 1.0E-06 AAAAGAAAAGAAAAAAAAAG 20 V_NANOG_02_M01247 TRANSFAC - 99039957 99039976 0.0E+00 AAAAGAAAAGAAAAGAAAAA 20 V_NANOG_02_M01247 TRANSFAC - 99039962 99039981 0.0E+00 AATAAAAAAGAAAAGAAAAG 20 V_OCT4_01_M01125 TRANSFAC + 99039626 99039640 0.0E+00 TTTTGAGATGCAAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.