Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

EGFL6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 25975 EGF-like-domain, multiple 6 chrX + 13582693 - 13588193 13587693 Transcription Factor Binding Sites   Download all TFBS in the EGFL6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HSF2_HSF_DBD_trimeric_13_1 SELEX + 13589397 13589409 2.0E-06 TTCTCGAAGGTTT 13 RARB_nuclearreceptor_full_dimeric_16_1 SELEX - 13589328 13589343 1.0E-05 AAATTTCTATAGTTCA 16 RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 13589894 13589909 1.0E-06 AAATGTCAAGTGGTCA 16 NFIA_NFI_full_dimeric_15_1 SELEX + 13583851 13583865 1.0E-05 TTGGCACAGGGCCCA 15 IRF7_IRF_DBD_dimeric_14_1 SELEX - 13589529 13589542 5.0E-06 AGGAAATTGAAACT 14 SRY_HMG_DBD_dimeric_16_1 SELEX + 13589330 13589345 2.0E-06 AACTATAGAAATTTTT 16 SRY_HMG_DBD_dimeric_16_1 SELEX - 13589330 13589345 2.0E-06 AAAAATTTCTATAGTT 16 HNF1B_MA0153.1 JASPAR + 13589931 13589942 9.0E-06 CCCATGTTTAAT 12 HOXD13_homeodomain_DBD_monomeric_11_1 SELEX - 13589851 13589861 1.0E-05 GCTCATAAACT 11 STAT1_MA0137.2 JASPAR - 13589424 13589438 4.0E-06 TTTTTCCTGTAAGTC 15 IRF1_MA0050.1 JASPAR - 13589529 13589540 2.0E-06 GAAATTGAAACT 12 NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 13589627 13589635 5.0E-06 CCCACTTAA 9 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 13589867 13589880 0.0E+00 GCAAATAATAAACA 14 POU2F3_POU_DBD_dimeric_12_1 SELEX + 13589550 13589561 7.0E-06 ATAAAAATGTAA 12 SOX7_HMG_full_dimeric_16_1 SELEX - 13589330 13589345 1.0E-06 AAAAATTTCTATAGTT 16 NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 13589627 13589636 5.0E-06 CCCACTTAAA 10 NKX2-3_homeodomain_full_monomeric_10_1 SELEX - 13589898 13589907 4.0E-06 ACCACTTGAC 10 Foxd3_MA0041.1 JASPAR - 13589433 13589444 4.0E-06 AAATATTTTTTC 12 IRF9_IRF_full_trimeric_15_1 SELEX - 13589529 13589543 1.0E-06 AAGGAAATTGAAACT 15 NFIB_NFI_full_dimeric_15_1 SELEX + 13583851 13583865 8.0E-06 TTGGCACAGGGCCCA 15 NFIB_NFI_full_dimeric_15_1 SELEX - 13583851 13583865 9.0E-06 TGGGCCCTGTGCCAA 15 SOX21_HMG_DBD_dimeric_16_1 SELEX - 13589330 13589345 7.0E-06 AAAAATTTCTATAGTT 16 IRF4_IRF_full_dimeric_15_1 SELEX - 13589528 13589542 9.0E-06 AGGAAATTGAAACTT 15 IRF3_IRF_full_trimeric_21_1 SELEX - 13589528 13589548 0.0E+00 ATGAAAAGGAAATTGAAACTT 21 ELF5_MA0136.1 JASPAR + 13589535 13589543 5.0E-06 AATTTCCTT 9 NFIA_NFI_full_monomeric_10_1 SELEX - 13583849 13583858 5.0E-06 TGTGCCAAGT 10 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX - 13589867 13589880 0.0E+00 GCAAATAATAAACA 14 V_CEBPG_Q6_M00622 TRANSFAC + 13589627 13589639 4.0E-06 CCCACTTAAAAAA 13 V_HNF3B_01_M00131 TRANSFAC + 13589869 13589883 1.0E-06 TTTATTATTTGCTCA 15 V_BCL6B_03_M02740 TRANSFAC - 13589504 13589519 7.0E-06 ACATTCTAAGAACCTG 16 V_NF1A_Q6_M02103 TRANSFAC - 13583850 13583865 1.0E-06 TGGGCCCTGTGCCAAG 16 V_FOXD3_01_M00130 TRANSFAC - 13589433 13589444 2.0E-06 AAATATTTTTTC 12 V_BCL6_01_M01183 TRANSFAC - 13589436 13589451 4.0E-06 TCTGATGAAATATTTT 16 V_AR_Q6_01_M01996 TRANSFAC + 13588535 13588549 9.0E-06 GCATTTACTGTTCTT 15 V_MAFB_03_M02879 TRANSFAC + 13589997 13590011 3.0E-06 CCATTGCAGAAAACT 15 V_IRF_Q6_01_M00972 TRANSFAC - 13589530 13589540 3.0E-06 GAAATTGAAAC 11 V_IRF2_Q6_M01882 TRANSFAC - 13589527 13589542 4.0E-06 AGGAAATTGAAACTTG 16 V_IRF2_Q6_M01882 TRANSFAC - 13589533 13589548 2.0E-06 ATGAAAAGGAAATTGA 16 V_NFAT3_Q3_M01734 TRANSFAC - 13589431 13589440 6.0E-06 ATTTTTTCCT 10 V_NFAT3_Q3_M01734 TRANSFAC + 13589585 13589594 3.0E-06 ACATTTTCCT 10 V_HNF3_Q6_01_M01012 TRANSFAC + 13589869 13589886 0.0E+00 TTTATTATTTGCTCAATG 18 V_FOXJ1_03_M02750 TRANSFAC - 13589861 13589876 2.0E-06 ATAATAAACACACCAG 16 V_NKX24_01_M01350 TRANSFAC + 13589624 13589639 5.0E-06 AAGCCCACTTAAAAAA 16 V_NKX24_01_M01350 TRANSFAC - 13589895 13589910 1.0E-06 CTGACCACTTGACATT 16 V_TCFAP2E_04_M02926 TRANSFAC + 13589428 13589441 0.0E+00 TACAGGAAAAAATA 14 V_HOXA13_03_M01430 TRANSFAC - 13589849 13589864 9.0E-06 CCAGCTCATAAACTTG 16 V_LDSPOLYA_B_M00317 TRANSFAC + 13589863 13589878 3.0E-06 GGTGTGTTTATTATTT 16 V_HOXC13_01_M01317 TRANSFAC - 13589849 13589864 3.0E-06 CCAGCTCATAAACTTG 16 V_AR_03_M00956 TRANSFAC + 13588528 13588554 4.0E-06 CGATAAAGCATTTACTGTTCTTGAGCT 27 V_HELIOSA_02_M01004 TRANSFAC - 13589587 13589597 3.0E-06 TCAAGGAAAAT 11 V_FOXA2_02_M02853 TRANSFAC - 13589866 13589880 3.0E-06 GCAAATAATAAACAC 15 V_CEBPE_Q6_M01868 TRANSFAC + 13589437 13589450 5.0E-06 AAATATTTCATCAG 14 V_ZFP105_03_M02827 TRANSFAC - 13589867 13589881 6.0E-06 AGCAAATAATAAACA 15 V_OCT1_03_M00137 TRANSFAC + 13589576 13589588 6.0E-06 CTCATAATCACAT 13 V_NFAT_Q6_M00302 TRANSFAC + 13589428 13589439 4.0E-06 TACAGGAAAAAA 12 V_NKX31_02_M02782 TRANSFAC + 13589623 13589639 1.0E-06 AAAGCCCACTTAAAAAA 17 V_NKX26_01_M01322 TRANSFAC + 13589624 13589639 9.0E-06 AAGCCCACTTAAAAAA 16 V_NKX26_01_M01322 TRANSFAC - 13589895 13589910 2.0E-06 CTGACCACTTGACATT 16 V_XFD3_01_M00269 TRANSFAC - 13589870 13589883 9.0E-06 TGAGCAAATAATAA 14 V_HNF1B_04_M02266 TRANSFAC + 13589931 13589942 9.0E-06 CCCATGTTTAAT 12 V_HNF3_Q6_M00791 TRANSFAC - 13589872 13589884 7.0E-06 TTGAGCAAATAAT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 13589867 13589877 8.0E-06 TGTTTATTATT 11 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 13589874 13589884 8.0E-06 TATTTGCTCAA 11 V_IRF_Q6_M00772 TRANSFAC + 13589526 13589540 2.0E-06 GCAAGTTTCAATTTC 15 V_IRF_Q6_M00772 TRANSFAC + 13589532 13589546 4.0E-06 TTCAATTTCCTTTTC 15 V_HNF1_Q6_01_M01011 TRANSFAC - 13589864 13589884 3.0E-06 TTGAGCAAATAATAAACACAC 21 V_NKX22_02_M01372 TRANSFAC - 13589894 13589910 0.0E+00 CTGACCACTTGACATTT 17 V_ISRE_01_M00258 TRANSFAC + 13589528 13589542 1.0E-06 AAGTTTCAATTTCCT 15 V_ELF5_01_M01197 TRANSFAC - 13589535 13589545 1.0E-06 AAAAGGAAATT 11 V_TCF7_03_M02817 TRANSFAC - 13589537 13589553 9.0E-06 TTATCATGAAAAGGAAA 17 V_STAT4_Q5_M02117 TRANSFAC + 13589427 13589436 4.0E-06 TTACAGGAAA 10 V_STAT4_Q5_M02117 TRANSFAC - 13589589 13589598 5.0E-06 TTCAAGGAAA 10 V_ISGF3G_03_M02771 TRANSFAC - 13589527 13589541 9.0E-06 GGAAATTGAAACTTG 15 V_ISGF4G_04_M02875 TRANSFAC + 13589481 13589494 8.0E-06 TTAAAACAGAACAA 14 V_NKX32_02_M01482 TRANSFAC + 13589623 13589639 1.0E-06 AAAGCCCACTTAAAAAA 17 V_IRF7_01_M00453 TRANSFAC - 13589526 13589543 0.0E+00 AAGGAAATTGAAACTTGC 18 V_CIZ_01_M00734 TRANSFAC + 13589433 13589441 3.0E-06 GAAAAAATA 9 V_MTF1_06_M02882 TRANSFAC - 13589865 13589878 1.0E-06 AAATAATAAACACA 14 V_NKX25_03_M01414 TRANSFAC + 13589624 13589639 5.0E-06 AAGCCCACTTAAAAAA 16 V_NKX25_03_M01414 TRANSFAC - 13589895 13589910 2.0E-06 CTGACCACTTGACATT 16 V_FOXL1_02_M02857 TRANSFAC + 13589478 13589493 2.0E-06 AAGTTAAAACAGAACA 16 V_FOXL1_04_M02753 TRANSFAC - 13589862 13589878 6.0E-06 AAATAATAAACACACCA 17 V_TEF1_Q6_03_M01817 TRANSFAC + 13589916 13589924 9.0E-06 CAGGAATGT 9 V_STAT1STAT1_Q3_M01212 TRANSFAC - 13589885 13589897 8.0E-06 ATTTCCAAGCACA 13 V_FOX_Q2_M00809 TRANSFAC + 13589864 13589876 6.0E-06 GTGTGTTTATTAT 13 V_PLZF_02_M01075 TRANSFAC + 13589470 13589498 5.0E-06 GGATTTCGAAGTTAAAACAGAACAAACCT 29 V_IRF1_Q6_01_M01881 TRANSFAC + 13589528 13589541 1.0E-06 AAGTTTCAATTTCC 14 V_IRF1_Q6_01_M01881 TRANSFAC + 13589534 13589547 9.0E-06 CAATTTCCTTTTCA 14 V_FOXJ2_01_M00422 TRANSFAC - 13589869 13589886 8.0E-06 CATTGAGCAAATAATAAA 18 V_FOXO1_01_M00473 TRANSFAC - 13589865 13589874 7.0E-06 AATAAACACA 10 V_PR_02_M00957 TRANSFAC + 13588528 13588554 2.0E-06 CGATAAAGCATTTACTGTTCTTGAGCT 27 V_HNF3B_Q6_M02014 TRANSFAC + 13589873 13589881 1.0E-05 TTATTTGCT 9 V_FOXO4_01_M00472 TRANSFAC - 13589863 13589873 8.0E-06 ATAAACACACC 11 V_ELF5_04_M02241 TRANSFAC + 13589535 13589543 5.0E-06 AATTTCCTT 9 V_TCF3_05_M02920 TRANSFAC + 13589429 13589443 5.0E-06 ACAGGAAAAAATATT 15 V_STAT1_Q6_M01823 TRANSFAC + 13589427 13589436 4.0E-06 TTACAGGAAA 10 V_STAT1_05_M01260 TRANSFAC + 13589424 13589445 2.0E-06 GACTTACAGGAAAAAATATTTC 22 V_DMRT5_01_M01150 TRANSFAC - 13589970 13589984 8.0E-06 CTCTGTAACAGTGTC 15 V_ZIC1_05_M02939 TRANSFAC - 13590834 13590848 6.0E-06 CCTCTCAGCAGGAAC 15 V_NKX21_01_M01312 TRANSFAC - 13589895 13589910 1.0E-06 CTGACCACTTGACATT 16 V_OCT4_01_M01125 TRANSFAC - 13589541 13589555 6.0E-06 TTTTATCATGAAAAG 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.