Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

MCM9


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
254394 minichromosome maintenance complex component 9 chr6 -119252403 - 119261327 119252903

Transcription Factor Binding Sites

 
Download all TFBS in the MCM9 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
TBX20_TBX_full_monomeric_11_1 SELEX - 119255483 119255493 7.0E-06 AAGTTGTGAAA 11
HSFY2_HSF_DBD_dimer-of-dimers_15_1 SELEX + 119255842 119255856 6.0E-06 TTCCAAACTTTCTAA 15
SRY_HMG_DBD_dimeric_15_1 SELEX + 119252811 119252825 2.0E-06 AAGAATATCATTCTT 15
KLF16_C2H2_DBD_monomeric_11_1 SELEX + 119255679 119255689 1.0E-05 GCCCCGCCCCC 11
SOX21_HMG_DBD_dimeric_13_2 SELEX - 119252812 119252824 9.0E-06 AGAATGATATTCT 13
SOX2_HMG_full_dimeric_17_1 SELEX + 119252810 119252826 5.0E-06 GAAGAATATCATTCTTA 17
SRY_HMG_DBD_dimeric_13_2 SELEX + 119252812 119252824 1.0E-06 AGAATATCATTCT 13
EWSR1-FLI1_MA0149.1 JASPAR + 119255583 119255600 7.0E-06 GAAAAGAAGACAGGAGAG 18
SOX7_HMG_full_dimeric_17_2 SELEX + 119252810 119252826 1.0E-06 GAAGAATATCATTCTTA 17
SOX7_HMG_full_dimeric_17_2 SELEX - 119252810 119252826 2.0E-06 TAAGAATGATATTCTTC 17
Sox17_HMG_DBD_dimeric_15_1 SELEX + 119252811 119252825 8.0E-06 AAGAATATCATTCTT 15
SOX15_HMG_full_dimeric_15_3 SELEX + 119252811 119252825 1.0E-06 AAGAATATCATTCTT 15
ISX_homeodomain_DBD_dimeric_13_1 SELEX + 119256584 119256596 6.0E-06 GTGATCCAATTAG 13
Pax4_MA0068.1 JASPAR + 119255534 119255563 1.0E-05 AAATAAAATCATTTGCTTTACTTTGTCCTC 30
RUNX2_RUNX_DBD_monomeric_9_1 SELEX + 119252762 119252770 1.0E-05 TAACCACAA 9
SOX8_HMG_full_dimeric_13_1 SELEX - 119252813 119252825 4.0E-06 AAGAATGATATTC 13
Sox17_HMG_DBD_dimeric_15_2 SELEX + 119252811 119252825 1.0E-06 AAGAATATCATTCTT 15
Sox17_HMG_DBD_dimeric_15_2 SELEX - 119252811 119252825 1.0E-05 AAGAATGATATTCTT 15
SOX2_HMG_full_dimeric_15_1 SELEX + 119252811 119252825 1.0E-06 AAGAATATCATTCTT 15
SP1_MA0079.2 JASPAR + 119255680 119255689 7.0E-06 CCCCGCCCCC 10
SP4_C2H2_full_monomeric_17_1 SELEX + 119255676 119255692 5.0E-06 GGAGCCCCGCCCCCTCC 17
SOX18_HMG_full_dimeric_15_1 SELEX + 119252811 119252825 7.0E-06 AAGAATATCATTCTT 15
SOX15_HMG_full_dimeric_15_1 SELEX + 119252811 119252825 1.0E-06 AAGAATATCATTCTT 15
SOX14_HMG_DBD_dimeric_15_1 SELEX + 119252811 119252825 1.0E-06 AAGAATATCATTCTT 15
SOX14_HMG_DBD_dimeric_15_1 SELEX - 119252874 119252888 6.0E-06 ATGAATAGCGATCAA 15
SOX7_HMG_full_dimeric_17_1 SELEX - 119252810 119252826 8.0E-06 TAAGAATGATATTCTTC 17
Mycn_MA0104.2 JASPAR + 119256175 119256184 9.0E-06 TGCACGTGGC 10
CART1_homeodomain_DBD_dimeric_13_1 SELEX + 119256584 119256596 1.0E-05 GTGATCCAATTAG 13
Uncx_homeodomain_DBD_dimeric_13_1 SELEX + 119256584 119256596 5.0E-06 GTGATCCAATTAG 13
Pou5f1_MA0142.1 JASPAR + 119252819 119252833 6.0E-06 CATTCTTATGGTATT 15
SOX18_HMG_full_dimeric_15_3 SELEX + 119252811 119252825 1.0E-06 AAGAATATCATTCTT 15
SOX18_HMG_full_dimeric_15_3 SELEX - 119252811 119252825 9.0E-06 AAGAATGATATTCTT 15
Sox3_HMG_DBD_dimeric_17_3 SELEX - 119252810 119252826 3.0E-06 TAAGAATGATATTCTTC 17
IRF3_IRF_full_trimeric_21_1 SELEX - 119255495 119255515 5.0E-06 AAGAAAAGGAAAGAGAACTTG 21
Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 119255557 119255571 1.0E-06 GTGGTCAAGAGGACA 15
Sox3_HMG_DBD_dimeric_17_1 SELEX + 119252810 119252826 6.0E-06 GAAGAATATCATTCTTA 17
Sox1_HMG_DBD_dimeric_15_2 SELEX + 119252811 119252825 1.0E-06 AAGAATATCATTCTT 15
E2F3_E2F_DBD_dimeric_18_3 SELEX + 119255521 119255538 9.0E-06 ATATTTGGGGTCAAAATA 18
RREB1_MA0073.1 JASPAR - 119256470 119256489 9.0E-06 ACAAAAAACAAACCCTAAGA 20
V_CEBPG_Q6_M00622 TRANSFAC - 119255971 119255983 1.0E-06 ATTACTTCAAAAA 13
V_DBX1_01_M01483 TRANSFAC - 119255511 119255527 9.0E-06 CAAATATTCAATAAGAA 17
V_AML_Q6_M00769 TRANSFAC - 119252760 119252774 8.0E-06 CCAGTTGTGGTTAAT 15
V_ZFP410_04_M02936 TRANSFAC + 119255733 119255749 7.0E-06 TCCCTCCGCCCCTCTCA 17
V_MAX_Q6_M01830 TRANSFAC - 119256176 119256187 3.0E-06 GCGGCCACGTGC 12
V_PAX4_03_M00378 TRANSFAC + 119257370 119257381 2.0E-06 AATAACCACCCC 12
V_SIX6_02_M01398 TRANSFAC - 119252932 119252948 9.0E-06 TCTTGAGTATCAAATAT 17
V_AML3_Q6_M01856 TRANSFAC + 119252763 119252770 1.0E-05 AACCACAA 8
V_POU5F1_02_M02245 TRANSFAC + 119252819 119252833 6.0E-06 CATTCTTATGGTATT 15
V_HOXA13_02_M01297 TRANSFAC + 119255534 119255542 4.0E-06 AAATAAAAT 9
V_SATB1_Q3_M01723 TRANSFAC + 119252900 119252915 4.0E-06 GTAACTAAAGAAAAAA 16
V_SP1_Q6_01_M00931 TRANSFAC - 119255648 119255657 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC - 119255679 119255688 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC - 119255721 119255730 4.0E-06 GGGGCGGGGC 10
V_SP1_Q6_01_M00931 TRANSFAC + 119256339 119256348 7.0E-06 GGGGCGGGGT 10
V_IRF2_Q6_M01882 TRANSFAC - 119255500 119255515 2.0E-06 AAGAAAAGGAAAGAGA 16
V_EAR2_Q2_M01728 TRANSFAC + 119255550 119255563 6.0E-06 TTTACTTTGTCCTC 14
V_SP1_03_M02281 TRANSFAC + 119255680 119255689 7.0E-06 CCCCGCCCCC 10
V_STAT6_01_M00494 TRANSFAC - 119252336 119252343 7.0E-06 TATTTCCA 8
V_HFH4_01_M00742 TRANSFAC + 119256473 119256485 3.0E-06 TAGGGTTTGTTTT 13
V_SP1_02_M01303 TRANSFAC + 119256339 119256349 3.0E-06 GGGGCGGGGTG 11
V_HTF_01_M00538 TRANSFAC - 119252323 119252346 0.0E+00 ATATATTTCCACGTCTGTGTTTAA 24
V_E2A_Q2_M00804 TRANSFAC + 119255623 119255636 8.0E-06 CCAGCTGTCTCCGG 14
V_AIRE_02_M01000 TRANSFAC - 119256014 119256038 5.0E-06 CCTCCTTTCGCGGTTATGTTTTTCT 25
V_HNF4A_04_M02764 TRANSFAC + 119255522 119255538 2.0E-06 TATTTGGGGTCAAAATA 17
V_TCFAP2E_04_M02926 TRANSFAC + 119252904 119252917 4.0E-06 CTAAAGAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 119252905 119252918 0.0E+00 TAAAGAAAAAAAAA 14
V_TCFAP2E_04_M02926 TRANSFAC + 119252906 119252919 1.0E-06 AAAGAAAAAAAAAA 14
V_CEBPB_01_M00109 TRANSFAC + 119252708 119252721 4.0E-06 ACATGTTGAAATAT 14
V_CEBPB_01_M00109 TRANSFAC - 119255480 119255493 2.0E-06 AAGTTGTGAAATGA 14
V_LXRB_RXRA_Q5_M02021 TRANSFAC - 119256412 119256426 1.0E-06 TGAGGTCACTGCTCG 15
V_HMGA2_01_M01300 TRANSFAC - 119252717 119252731 1.0E-06 AAATCGGGGAATATT 15
V_HMGA2_01_M01300 TRANSFAC + 119252718 119252732 5.0E-06 ATATTCCCCGATTTC 15
V_ELF4_04_M02850 TRANSFAC + 119252903 119252919 9.0E-06 ACTAAAGAAAAAAAAAA 17
V_ELF4_04_M02850 TRANSFAC - 119252925 119252941 7.0E-06 TATCAAATATATAATAT 17
V_ELF4_04_M02850 TRANSFAC + 119255529 119255545 1.0E-06 GGTCAAAATAAAATCAT 17
V_GC_01_M00255 TRANSFAC - 119255677 119255690 4.0E-06 AGGGGGCGGGGCTC 14
V_FOXA2_02_M02853 TRANSFAC - 119256475 119256489 6.0E-06 ACAAAAAACAAACCC 15
V_ZFP105_03_M02827 TRANSFAC + 119252908 119252922 4.0E-06 AGAAAAAAAAAAGGA 15
V_RXRA_03_M02791 TRANSFAC - 119255522 119255538 2.0E-06 TATTTTGACCCCAAATA 17
V_POLY_C_M00212 TRANSFAC + 119255534 119255551 0.0E+00 AAATAAAATCATTTGCTT 18
V_E2F1_Q6_01_M00940 TRANSFAC + 119255765 119255774 4.0E-06 ATTTCGCGCC 10
V_SOX1_04_M02906 TRANSFAC + 119252815 119252829 7.0E-06 ATATCATTCTTATGG 15
V_MRF2_01_M00454 TRANSFAC - 119256569 119256582 5.0E-06 GACCTCAATATAAA 14
V_SP4_03_M02810 TRANSFAC + 119255678 119255694 6.0E-06 AGCCCCGCCCCCTCCGC 17
V_AML2_01_M01759 TRANSFAC + 119252763 119252770 1.0E-05 AACCACAA 8
V_KROX_Q6_M00982 TRANSFAC + 119255681 119255694 2.0E-06 CCCGCCCCCTCCGC 14
V_CEBPD_Q6_M00621 TRANSFAC + 119255481 119255492 9.0E-06 CATTTCACAACT 12
V_AP1_Q6_01_M00925 TRANSFAC + 119252843 119252851 2.0E-06 ATGACTCAA 9
V_SP1_Q6_M00196 TRANSFAC - 119255647 119255659 5.0E-06 GCGGGGCGGGGCT 13
V_SP1_Q6_M00196 TRANSFAC - 119255678 119255690 0.0E+00 AGGGGGCGGGGCT 13
V_ARID3A_02_M02839 TRANSFAC - 119252932 119252946 1.0E-06 TTGAGTATCAAATAT 15
V_IRC900814_04_M02870 TRANSFAC - 119255483 119255498 7.0E-06 CTTGAAAGTTGTGAAA 16
V_IRF_Q6_M00772 TRANSFAC + 119255499 119255513 2.0E-06 TTCTCTTTCCTTTTC 15
V_GLIS2_03_M02759 TRANSFAC - 119255521 119255536 7.0E-06 TTTTGACCCCAAATAT 16
V_PAX6_Q2_M00979 TRANSFAC + 119252330 119252343 9.0E-06 CAGACGTGGAAATA 14
V_RAX_01_M01389 TRANSFAC - 119256584 119256600 9.0E-06 AGCTCTAATTGGATCAC 17
V_SP1SP3_Q4_M01219 TRANSFAC + 119255682 119255692 1.0E-06 CCGCCCCCTCC 11
V_SP1SP3_Q4_M01219 TRANSFAC - 119256034 119256044 5.0E-06 CCGCCTCCTCC 11
V_MEF2_04_M00233 TRANSFAC + 119255523 119255544 6.0E-06 ATTTGGGGTCAAAATAAAATCA 22
V_PEBP_Q6_M00984 TRANSFAC + 119252760 119252774 7.0E-06 ATTAACCACAACTGG 15
V_KLF7_03_M02773 TRANSFAC + 119255718 119255733 5.0E-06 TCGGCCCCGCCCCACT 16
V_MYCN_01_M02259 TRANSFAC + 119256175 119256184 9.0E-06 TGCACGTGGC 10
V_SP1_01_M00008 TRANSFAC + 119256339 119256348 3.0E-06 GGGGCGGGGT 10
V_TBP_06_M02814 TRANSFAC + 119252923 119252938 1.0E-06 TCATATTATATATTTG 16
V_TBP_06_M02814 TRANSFAC - 119252923 119252938 7.0E-06 CAAATATATAATATGA 16
V_TBP_06_M02814 TRANSFAC + 119252925 119252940 7.0E-06 ATATTATATATTTGAT 16
V_TBP_06_M02814 TRANSFAC - 119252925 119252940 2.0E-06 ATCAAATATATAATAT 16
V_LMO2COM_01_M00277 TRANSFAC - 119255664 119255675 1.0E-06 CGGCAGGTGCAG 12
V_ISGF4G_04_M02875 TRANSFAC + 119256015 119256028 2.0E-06 GAAAAACATAACCG 14
V_FOXO1_Q5_M01216 TRANSFAC - 119256478 119256486 1.0E-06 AAAAACAAA 9
V_IRF7_01_M00453 TRANSFAC - 119255499 119255516 7.0E-06 TAAGAAAAGGAAAGAGAA 18
V_SP4_Q5_M01273 TRANSFAC + 119255648 119255658 2.0E-06 GCCCCGCCCCG 11
V_SP4_Q5_M01273 TRANSFAC + 119255679 119255689 1.0E-06 GCCCCGCCCCC 11
V_AP1_Q4_01_M00926 TRANSFAC - 119252843 119252850 1.0E-05 TGAGTCAT 8
V_MYOD_Q6_02_M02100 TRANSFAC + 119255624 119255632 8.0E-06 CAGCTGTCT 9
V_MTF1_06_M02882 TRANSFAC + 119252903 119252916 6.0E-06 ACTAAAGAAAAAAA 14
V_MTF1_06_M02882 TRANSFAC + 119252906 119252919 1.0E-06 AAAGAAAAAAAAAA 14
V_MTF1_06_M02882 TRANSFAC - 119255513 119255526 9.0E-06 AAATATTCAATAAG 14
V_T3R_01_M00239 TRANSFAC - 119256414 119256429 5.0E-06 GCCTGAGGTCACTGCT 16
V_FAC1_01_M00456 TRANSFAC - 119256478 119256491 3.0E-06 AGACAAAAAACAAA 14
V_CAAT_C_M00200 TRANSFAC - 119256346 119256370 4.0E-06 CCCAATCCGCCCGCTCCGCTCCACC 25
V_NKX3A_02_M01383 TRANSFAC + 119252687 119252703 7.0E-06 TTGTAAGCACTTCACTG 17
V_E2F3_03_M02743 TRANSFAC - 119255755 119255769 8.0E-06 GAAATGGCGCGCCCC 15
V_NKX22_01_M00485 TRANSFAC - 119252850 119252859 7.0E-06 TCAAGTGTTT 10
V_FRA1_Q5_M01267 TRANSFAC - 119252843 119252850 1.0E-05 TGAGTCAT 8
V_FOX_Q2_M00809 TRANSFAC + 119252926 119252938 8.0E-06 TATTATATATTTG 13
V_TCFAP2B_04_M02924 TRANSFAC - 119256236 119256250 7.0E-06 AGAGCCGCAGGCGCT 15
V_LXRA_RXRA_Q3_M00647 TRANSFAC - 119256414 119256428 0.0E+00 CCTGAGGTCACTGCT 15
V_DMRT2_01_M01147 TRANSFAC - 119252915 119252930 2.0E-06 TAATATGATCCTTTTT 16
V_SRF_06_M02916 TRANSFAC + 119252903 119252919 2.0E-06 ACTAAAGAAAAAAAAAA 17
V_SRF_06_M02916 TRANSFAC + 119252904 119252920 1.0E-06 CTAAAGAAAAAAAAAAG 17
V_SRF_06_M02916 TRANSFAC + 119252906 119252922 2.0E-06 AAAGAAAAAAAAAAGGA 17
V_SRF_06_M02916 TRANSFAC + 119252907 119252923 2.0E-06 AAGAAAAAAAAAAGGAT 17
V_EWSR1FLI1_01_M02252 TRANSFAC + 119255583 119255600 7.0E-06 GAAAAGAAGACAGGAGAG 18
V_YY1_01_M00059 TRANSFAC + 119252312 119252328 9.0E-06 GAATTACATTTTTAAAC 17
V_SOX1_03_M02802 TRANSFAC + 119255511 119255526 3.0E-06 TTCTTATTGAATATTT 16
V_SOX1_03_M02802 TRANSFAC - 119255512 119255527 6.0E-06 CAAATATTCAATAAGA 16
V_HOMEZ_01_M01429 TRANSFAC - 119252912 119252928 8.0E-06 ATATGATCCTTTTTTTT 17
V_FOXO1_01_M00473 TRANSFAC - 119256478 119256487 2.0E-06 AAAAAACAAA 10
V_SP1_Q2_01_M00933 TRANSFAC + 119255680 119255689 4.0E-06 CCCCGCCCCC 10
V_FOXO4_01_M00472 TRANSFAC - 119256476 119256486 3.0E-06 AAAAACAAACC 11
V_UF1H3BETA_Q6_M01068 TRANSFAC - 119255878 119255891 4.0E-06 TGTGGGGCAGGGGC 14
V_CEBP_Q2_01_M00912 TRANSFAC + 119255482 119255493 4.0E-06 ATTTCACAACTT 12
V_AP2ALPHA_03_M01047 TRANSFAC + 119256236 119256250 8.0E-06 AGCGCCTGCGGCTCT 15
V_AP2ALPHA_03_M01047 TRANSFAC - 119256236 119256250 8.0E-06 AGAGCCGCAGGCGCT 15
V_SP1_Q4_01_M00932 TRANSFAC - 119255647 119255659 9.0E-06 GCGGGGCGGGGCT 13
V_SP1_Q4_01_M00932 TRANSFAC - 119255678 119255690 0.0E+00 AGGGGGCGGGGCT 13
V_TAACC_B_M00331 TRANSFAC + 119256011 119256033 1.0E-06 TGGAGAAAAACATAACCGCGAAA 23
V_TCF3_05_M02920 TRANSFAC + 119252906 119252920 1.0E-05 AAAGAAAAAAAAAAG 15
V_ARID5A_04_M02840 TRANSFAC - 119255507 119255523 7.0E-06 TATTCAATAAGAAAAGG 17
V_SMAD1_01_M01590 TRANSFAC - 119255507 119255518 8.0E-06 AATAAGAAAAGG 12
V_NANOG_02_M01247 TRANSFAC + 119252900 119252919 1.0E-06 GTAACTAAAGAAAAAAAAAA 20
V_NANOG_02_M01247 TRANSFAC - 119255503 119255522 3.0E-06 ATTCAATAAGAAAAGGAAAG 20
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL