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SPG20 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 23111 spastic paraplegia 20 (Troyer syndrome) chr13 - 36943817 - 36949317 36944317 Transcription Factor Binding Sites   Download all TFBS in the SPG20 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MYBL2_MYB_DBD_dimeric_16_1 SELEX + 36948250 36948265 2.0E-06 ACAGTTAAAGCTGTTG 16 POU3F4_POU_DBD_monomeric_11_1 SELEX + 36944169 36944179 7.0E-06 AGCATAAATAA 11 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 36944191 36944204 2.0E-06 ATTATCATTATTAA 14 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX + 36944194 36944207 9.0E-06 ATAATGATAATAAA 14 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 36944194 36944207 1.0E-06 TTTATTATCATTAT 14 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 36943520 36943535 4.0E-06 AAAATTGTGTTAAATG 16 POU4F3_POU_DBD_monomeric_16_1 SELEX - 36944187 36944202 7.0E-06 TATCATTATTAATCAC 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 36943520 36943535 5.0E-06 AAAATTGTGTTAAATG 16 NFATC1_NFAT_full_dimeric_14_1 SELEX + 36940441 36940454 4.0E-06 CATTCCATGGAATC 14 NFATC1_NFAT_full_dimeric_14_1 SELEX - 36940441 36940454 2.0E-06 GATTCCATGGAATG 14 MYBL1_MYB_DBD_dimeric_17_1 SELEX + 36948249 36948265 5.0E-06 AACAGTTAAAGCTGTTG 17 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 36940431 36940447 7.0E-06 AAATGTCAGACATTCCA 17 TEAD3_TEA_DBD_monomeric_8_1 SELEX + 36940440 36940447 1.0E-05 ACATTCCA 8 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 36944189 36944202 9.0E-06 GATTAATAATGATA 14 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX + 36944191 36944207 4.0E-06 TTAATAATGATAATAAA 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 36944191 36944207 8.0E-06 TTTATTATCATTATTAA 17 TEAD4_TEA_DBD_monomeric_10_1 SELEX + 36940439 36940448 8.0E-06 GACATTCCAT 10 RUNX1_MA0002.2 JASPAR + 36943548 36943558 2.0E-06 TGCTGTGGTTT 11 POU3F3_POU_DBD_dimeric_12_1 SELEX + 36944190 36944201 7.0E-06 ATTAATAATGAT 12 TBX1_TBX_DBD_dimeric_20_1 SELEX - 36944466 36944485 8.0E-06 TGGTGCTAAGACACGCGTGG 20 E2F3_E2F_DBD_dimeric_18_3 SELEX - 36943530 36943547 9.0E-06 GAATTTGGAGACAAAATT 18 V_DBX1_01_M01483 TRANSFAC - 36944188 36944204 6.0E-06 ATTATCATTATTAATCA 17 V_FREAC7_01_M00293 TRANSFAC + 36944167 36944182 6.0E-06 AGAGCATAAATAAAAC 16 V_SOX40_04_M02908 TRANSFAC + 36943587 36943602 7.0E-06 TTAAATTTTAATCTGG 16 V_XFD1_01_M00267 TRANSFAC + 36944169 36944182 5.0E-06 AGCATAAATAAAAC 14 V_SRY_07_M02813 TRANSFAC + 36944193 36944208 8.0E-06 AATAATGATAATAAAG 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 36948243 36948254 1.0E-05 ACTGTTTAAAAG 12 V_ETS_B_M00340 TRANSFAC + 36944337 36944350 9.0E-06 GAGAGGAAACAAGA 14 V_HOXA13_02_M01297 TRANSFAC + 36944174 36944182 1.0E-06 AAATAAAAC 9 V_SATB1_Q3_M01723 TRANSFAC + 36944190 36944205 0.0E+00 ATTAATAATGATAATA 16 V_AP4_Q6_M00176 TRANSFAC - 36940354 36940363 5.0E-06 CACAGCTGGA 10 V_SOX11_04_M02899 TRANSFAC - 36943522 36943535 2.0E-06 AAAATTGTGTTAAA 14 V_STAT6_01_M00494 TRANSFAC - 36943718 36943725 7.0E-06 TATTTCCA 8 V_PU1_Q4_M01172 TRANSFAC - 36944335 36944353 2.0E-06 CACTCTTGTTTCCTCTCTC 19 V_SOX21_03_M02803 TRANSFAC - 36944190 36944205 6.0E-06 TATTATCATTATTAAT 16 V_SOX21_03_M02803 TRANSFAC + 36944193 36944208 2.0E-06 AATAATGATAATAAAG 16 V_SOX21_03_M02803 TRANSFAC - 36944193 36944208 4.0E-06 CTTTATTATCATTATT 16 V_CEBPB_01_M00109 TRANSFAC - 36940398 36940411 0.0E+00 GAGTTGTGAAATAT 14 V_CDP_04_M01344 TRANSFAC + 36944192 36944206 2.0E-06 TAATAATGATAATAA 15 V_CDP_04_M01344 TRANSFAC + 36944195 36944209 2.0E-06 TAATGATAATAAAGT 15 V_NRSE_B_M00325 TRANSFAC - 36944399 36944419 3.0E-06 ATCAGCACCACAGACCCTGGC 21 V_TAL1_Q6_M00993 TRANSFAC + 36944419 36944428 1.0E-06 TCCATCTGCT 10 V_OCT1_03_M00137 TRANSFAC + 36944191 36944203 0.0E+00 TTAATAATGATAA 13 V_CART1_01_M00416 TRANSFAC - 36944192 36944209 0.0E+00 ACTTTATTATCATTATTA 18 V_RUNX1_01_M02257 TRANSFAC + 36943548 36943558 2.0E-06 TGCTGTGGTTT 11 V_HNF1_Q6_M00790 TRANSFAC + 36944188 36944205 6.0E-06 TGATTAATAATGATAATA 18 V_CEBPB_02_M00117 TRANSFAC + 36940398 36940411 7.0E-06 ATATTTCACAACTC 14 V_OLF1_01_M00261 TRANSFAC + 36948271 36948292 2.0E-06 TACAACTCCTCTGGGAAGCTAC 22 V_HOXA3_07_M02869 TRANSFAC - 36943466 36943479 1.0E-05 ATATACGATTATGA 14 V_CDX2_01_M01449 TRANSFAC + 36944196 36944211 4.0E-06 AATGATAATAAAGTTT 16 V_HNF1_Q6_01_M01011 TRANSFAC - 36943582 36943602 7.0E-06 CCAGATTAAAATTTAAACTCA 21 V_HNF1_Q6_01_M01011 TRANSFAC + 36944192 36944212 5.0E-06 TAATAATGATAATAAAGTTTA 21 V_PAX5_01_M00143 TRANSFAC - 36943547 36943574 9.0E-06 CAAAAAGGCATTGATGAAACCACAGCAG 28 V_CUX1_04_M02959 TRANSFAC + 36944192 36944206 2.0E-06 TAATAATGATAATAA 15 V_CUX1_04_M02959 TRANSFAC + 36944195 36944209 2.0E-06 TAATGATAATAAAGT 15 V_HOX13_01_M00023 TRANSFAC + 36940463 36940492 1.0E-05 TCTCTCTATCAAAATTATCACACTACTATT 30 V_CDX1_01_M01373 TRANSFAC + 36944196 36944211 5.0E-06 AATGATAATAAAGTTT 16 V_OCT1_04_M00138 TRANSFAC - 36943455 36943477 1.0E-05 ATACGATTATGAAGAGTGTAAGA 23 V_OCT1_04_M00138 TRANSFAC + 36944189 36944211 3.0E-06 GATTAATAATGATAATAAAGTTT 23 V_HBP1_03_M02762 TRANSFAC - 36948300 36948315 9.0E-06 GCTTTGAATGGATCCA 16 V_HBP1_03_M02762 TRANSFAC + 36948323 36948338 2.0E-06 GCTTTGAATGGATAAC 16 V_SPIB_01_M01204 TRANSFAC + 36943689 36943705 4.0E-06 AAATACAGGAAGATCTC 17 V_PNR_01_M01650 TRANSFAC - 36943588 36943601 9.0E-06 CAGATTAAAATTTA 14 V_MEF2_Q6_01_M00941 TRANSFAC - 36944172 36944183 9.0E-06 TGTTTTATTTAT 12 V_CDC5_01_M00478 TRANSFAC + 36943520 36943531 8.0E-06 CATTTAACACAA 12 V_NCX_02_M01420 TRANSFAC + 36944184 36944200 5.0E-06 GTAGTGATTAATAATGA 17 V_NEUROD_02_M01288 TRANSFAC + 36940353 36940364 4.0E-06 CTCCAGCTGTGC 12 V_ELF1_Q6_M00746 TRANSFAC + 36943690 36943701 7.0E-06 AATACAGGAAGA 12 V_LRH1_Q5_M01142 TRANSFAC - 36940280 36940291 4.0E-06 AGGGCCTTGAAC 12 V_HOXB8_01_M01451 TRANSFAC + 36944183 36944198 4.0E-06 AGTAGTGATTAATAAT 16 V_HNF1_01_M00132 TRANSFAC - 36943585 36943599 7.0E-06 GATTAAAATTTAAAC 15 V_GFI1B_01_M01058 TRANSFAC - 36943607 36943618 7.0E-06 TAAATCAGTTAT 12 V_GFI1B_01_M01058 TRANSFAC + 36944247 36944258 9.0E-06 CAAATCACTTAT 12 V_PARP_Q3_M01211 TRANSFAC + 36943717 36943726 8.0E-06 TTGGAAATAC 10 V_GATA6_01_M00462 TRANSFAC + 36944196 36944205 6.0E-06 AATGATAATA 10 V_NRSF_01_M00256 TRANSFAC - 36944399 36944419 9.0E-06 ATCAGCACCACAGACCCTGGC 21 V_STAT6_02_M00500 TRANSFAC + 36944259 36944266 1.0E-05 GATTTCCT 8 V_NFAT2_02_M01749 TRANSFAC - 36940442 36940452 0.0E+00 TTCCATGGAAT 11 V_NFAT2_02_M01749 TRANSFAC + 36940443 36940453 0.0E+00 TTCCATGGAAT 11 V_DMRT2_01_M01147 TRANSFAC + 36948296 36948311 2.0E-06 GAATTGGATCCATTCA 16 V_SRF_06_M02916 TRANSFAC + 36944170 36944186 8.0E-06 GCATAAATAAAACAGTA 17 V_SRF_06_M02916 TRANSFAC + 36948262 36948278 6.0E-06 GTTGAAAAATACAACTC 17 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC + 36943551 36943558 1.0E-05 TGTGGTTT 8 V_PIT1_Q6_M00802 TRANSFAC + 36943463 36943480 0.0E+00 TCTTCATAATCGTATATA 18 V_PIT1_Q6_M00802 TRANSFAC - 36944186 36944203 1.0E-05 TTATCATTATTAATCACT 18 V_BRN3C_01_M01408 TRANSFAC - 36944184 36944199 9.0E-06 CATTATTAATCACTAC 16 V_HOXA10_01_M01464 TRANSFAC + 36944197 36944212 4.0E-06 ATGATAATAAAGTTTA 16 V_SOX5_07_M02909 TRANSFAC - 36943522 36943538 4.0E-06 GACAAAATTGTGTTAAA 17 V_GATA6_04_M02757 TRANSFAC - 36944204 36944220 5.0E-06 TAAAGAGATAAACTTTA 17 V_HOXD10_01_M01375 TRANSFAC + 36944197 36944213 1.0E-06 ATGATAATAAAGTTTAT 17 V_GLIS2_04_M02863 TRANSFAC + 36944196 36944209 6.0E-06 AATGATAATAAAGT 14 V_ARID5A_04_M02840 TRANSFAC + 36940259 36940275 7.0E-06 ATCTAAATACGTTAGAA 17 V_SOX14_03_M02798 TRANSFAC + 36944190 36944205 9.0E-06 ATTAATAATGATAATA 16 V_SOX14_03_M02798 TRANSFAC + 36944193 36944208 6.0E-06 AATAATGATAATAAAG 16

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