Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SLC4A1AP Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 22950 solute carrier family 4 (anion exchanger), member 1, adaptor protein chr2 + 27881337 - 27886837 27886337 Transcription Factor Binding Sites   Download all TFBS in the SLC4A1AP promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 27890455 27890464 8.0E-06 ATCATAAAAA 10 HOXA10_homeodomain_DBD_monomeric_12_1 SELEX + 27890454 27890465 1.0E-06 AATCATAAAAAT 12 IRF7_IRF_DBD_dimeric_14_1 SELEX + 27887546 27887559 8.0E-06 ACGAAAGTGAAGGA 14 SPIC_ETS_full_monomeric_14_1 SELEX + 27890490 27890503 0.0E+00 AAAAAAAGGAAGTA 14 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 27890418 27890435 4.0E-06 AAAATTATTCCTCATTAG 18 PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 27890418 27890435 3.0E-06 CTAATGAGGAATAATTTT 18 EWSR1-FLI1_MA0149.1 JASPAR + 27886913 27886930 6.0E-06 GGAGGTACAGAAGGAAGG 18 GATA5_GATA_DBD_monomeric_8_1 SELEX - 27890481 27890488 7.0E-06 AGATAAGA 8 HOXD11_homeodomain_DBD_monomeric_10_1 SELEX + 27890455 27890464 3.0E-06 ATCATAAAAA 10 HOXC11_homeodomain_full_monomeric_11_1 SELEX + 27890454 27890464 7.0E-06 AATCATAAAAA 11 GATA4_GATA_DBD_monomeric_8_1 SELEX - 27890481 27890488 7.0E-06 AGATAAGA 8 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX + 27886106 27886114 2.0E-06 ACCACTTAA 9 Pax4_MA0068.1 JASPAR - 27890398 27890427 1.0E-06 GAATAATTTTCAAAATAAACCTAAAGCAAC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 27890490 27890503 0.0E+00 AAAAAAAGGAAGTA 14 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX + 27890455 27890464 1.0E-06 ATCATAAAAA 10 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 27890454 27890463 4.0E-06 AATCATAAAA 10 NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 27886106 27886114 2.0E-06 ACCACTTAA 9 MYBL2_MYB_DBD_monomeric_11_1 SELEX + 27886584 27886594 7.0E-06 ATAACCGTTTT 11 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 27890454 27890464 4.0E-06 AATCATAAAAA 11 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 27888037 27888050 5.0E-06 AGCAAATATTGTTG 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 27888037 27888050 8.0E-06 CAACAATATTTGCT 14 HOXC11_homeodomain_DBD_monomeric_11_1 SELEX + 27890454 27890464 2.0E-06 AATCATAAAAA 11 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 27890505 27890525 3.0E-06 TTTTTCCTGACTCATCTCATT 21 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 27890505 27890525 8.0E-06 AATGAGATGAGTCAGGAAAAA 21 Gata1_MA0035.2 JASPAR - 27890480 27890490 3.0E-06 TAAGATAAGAA 11 GATA3_GATA_full_monomeric_8_1 SELEX - 27890481 27890488 7.0E-06 AGATAAGA 8 NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 27886106 27886115 2.0E-06 ACCACTTAAC 10 Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX + 27890454 27890465 2.0E-06 AATCATAAAAAT 12 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 27888037 27888050 1.0E-05 AGCAAATATTGTTG 14 MAFG_bZIP_full_dimeric_21_1 SELEX + 27890505 27890525 8.0E-06 TTTTTCCTGACTCATCTCATT 21 MAFG_bZIP_full_dimeric_21_1 SELEX - 27890505 27890525 2.0E-06 AATGAGATGAGTCAGGAAAAA 21 ELF5_ETS_full_monomeric_11_1 SELEX + 27890493 27890503 6.0E-06 AAAAGGAAGTA 11 HOXC10_homeodomain_DBD_monomeric_10_3 SELEX + 27890455 27890464 2.0E-06 ATCATAAAAA 10 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 27890551 27890561 6.0E-06 TTTCCCCACCA 11 HMX2_homeodomain_DBD_monomeric_11_1 SELEX + 27886106 27886116 5.0E-06 ACCACTTAACT 11 ETS1_ETS_full_dimeric_18_1 SELEX + 27886488 27886505 4.0E-06 GCCGGAAGCGCTTCTTCT 18 Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX + 27890455 27890463 8.0E-06 ATCATAAAA 9 HOXD12_homeodomain_DBD_monomeric_11_1 SELEX + 27890454 27890464 4.0E-06 AATCATAAAAA 11 SPI1_ETS_full_monomeric_14_1 SELEX + 27890490 27890503 0.0E+00 AAAAAAAGGAAGTA 14 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 27886293 27886307 4.0E-06 AGGGTCCTGAGGTCG 15 ELF5_MA0136.1 JASPAR - 27890495 27890503 4.0E-06 TACTTCCTT 9 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 27890454 27890464 7.0E-06 AATCATAAAAA 11 HOXC12_homeodomain_DBD_monomeric_11_1 SELEX + 27890454 27890464 8.0E-06 AATCATAAAAA 11 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 27890454 27890464 6.0E-06 AATCATAAAAA 11 V_HOXA9_01_M01351 TRANSFAC - 27886600 27886616 4.0E-06 AAGGTCATAATATGAGA 17 V_HOXA9_01_M01351 TRANSFAC + 27890452 27890468 3.0E-06 AAAATCATAAAAATCTT 17 V_SPI1_01_M01203 TRANSFAC + 27890490 27890506 0.0E+00 AAAAAAAGGAAGTACTT 17 V_TCF3_01_M01594 TRANSFAC + 27886590 27886602 2.0E-06 GTTTTGTTTTTCT 13 V_FLI1_Q6_M01208 TRANSFAC + 27886522 27886532 1.0E-06 CAGGAAGTCAT 11 V_GATA1_Q6_M02004 TRANSFAC - 27890479 27890493 2.0E-06 TTTTAAGATAAGAAG 15 V_SMAD3_Q6_01_M01888 TRANSFAC - 27887196 27887208 3.0E-06 AGCCAGACAGCCT 13 V_CEBP_Q3_M00770 TRANSFAC + 27890410 27890421 7.0E-06 TTATTTTGAAAA 12 V_BCL6_01_M01183 TRANSFAC - 27890449 27890464 0.0E+00 TTTTTATGATTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 27890571 27890586 5.0E-06 CTTCCTGTAGTTTTTT 16 V_ETS_B_M00340 TRANSFAC + 27886520 27886533 0.0E+00 AACAGGAAGTCATT 14 V_SPIB_02_M02041 TRANSFAC + 27890494 27890503 4.0E-06 AAAGGAAGTA 10 V_HOXA13_02_M01297 TRANSFAC - 27890407 27890415 3.0E-06 AAATAAACC 9 V_MAFB_03_M02879 TRANSFAC + 27886129 27886143 9.0E-06 TAATTTCAGAAAAAA 15 V_MAFB_03_M02879 TRANSFAC - 27890409 27890423 5.0E-06 AATTTTCAAAATAAA 15 V_FOXJ2_02_M00423 TRANSFAC - 27888038 27888051 2.0E-06 CCAACAATATTTGC 14 V_ISL2_01_M01328 TRANSFAC + 27886102 27886117 1.0E-05 CTTAACCACTTAACTA 16 V_SRY_02_M00160 TRANSFAC - 27886589 27886600 9.0E-06 AAAAACAAAACG 12 V_NFAT3_Q3_M01734 TRANSFAC + 27890503 27890512 6.0E-06 ACTTTTTCCT 10 V_HNF4_Q6_M00967 TRANSFAC - 27890540 27890548 1.0E-05 AAAGTCCAG 9 V_NKX24_01_M01350 TRANSFAC + 27886103 27886118 0.0E+00 TTAACCACTTAACTAT 16 V_PU1_Q4_M01172 TRANSFAC - 27887513 27887531 3.0E-06 AGATTCTTCTTCCTCATCC 19 V_PU1_Q4_M01172 TRANSFAC - 27890491 27890509 1.0E-06 AAAAAGTACTTCCTTTTTT 19 V_TCFAP2E_04_M02926 TRANSFAC + 27886132 27886145 6.0E-06 TTTCAGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 27886133 27886146 1.0E-06 TTCAGAAAAAAAAT 14 V_CETS1P54_02_M00074 TRANSFAC - 27890568 27890580 6.0E-06 CTACAGGAAGTTG 13 V_BARBIE_01_M00238 TRANSFAC - 27887502 27887516 5.0E-06 ATCCAAAGCTTAAGA 15 V_ETS_Q4_M00771 TRANSFAC - 27886522 27886533 3.0E-06 AATGACTTCCTG 12 V_SPIC_01_M02042 TRANSFAC + 27890494 27890503 4.0E-06 AAAGGAAGTA 10 V_ELF4_04_M02850 TRANSFAC + 27886132 27886148 0.0E+00 TTTCAGAAAAAAAATAA 17 V_ELF4_04_M02850 TRANSFAC - 27890404 27890420 2.0E-06 TTTCAAAATAAACCTAA 17 V_ELF4_04_M02850 TRANSFAC - 27890405 27890421 3.0E-06 TTTTCAAAATAAACCTA 17 V_BACH1_01_M00495 TRANSFAC - 27890508 27890522 9.0E-06 GAGATGAGTCAGGAA 15 V_COMP1_01_M00057 TRANSFAC - 27886493 27886516 0.0E+00 TAGCTTGATTGAGAAGAAGCGCTT 24 V_SOX13_03_M02797 TRANSFAC - 27890416 27890431 9.0E-06 TGAGGAATAATTTTCA 16 V_HOXB13_01_M01467 TRANSFAC + 27890452 27890467 9.0E-06 AAAATCATAAAAATCT 16 V_NKX31_02_M02782 TRANSFAC + 27886102 27886118 0.0E+00 CTTAACCACTTAACTAT 17 V_NKX26_01_M01322 TRANSFAC + 27886103 27886118 0.0E+00 TTAACCACTTAACTAT 16 V_RSRFC4_Q2_M00407 TRANSFAC - 27890406 27890422 1.0E-05 ATTTTCAAAATAAACCT 17 V_HOXD12_01_M01380 TRANSFAC + 27890451 27890467 7.0E-06 AAAAATCATAAAAATCT 17 V_HOXB9_01_M01426 TRANSFAC + 27890452 27890467 0.0E+00 AAAATCATAAAAATCT 16 V_CDX2_01_M01449 TRANSFAC - 27886602 27886617 7.0E-06 GAAGGTCATAATATGA 16 V_CDX2_01_M01449 TRANSFAC + 27890451 27890466 2.0E-06 AAAAATCATAAAAATC 16 V_CDX2_Q5_M00729 TRANSFAC - 27890454 27890467 2.0E-06 AGATTTTTATGATT 14 V_HOXC11_01_M01329 TRANSFAC + 27890451 27890466 5.0E-06 AAAAATCATAAAAATC 16 V_NKX22_02_M01372 TRANSFAC + 27886103 27886119 1.0E-06 TTAACCACTTAACTATT 17 V_HOXD11_01_M01434 TRANSFAC + 27890451 27890467 1.0E-06 AAAAATCATAAAAATCT 17 V_ELF5_01_M01197 TRANSFAC + 27890493 27890503 0.0E+00 AAAAGGAAGTA 11 V_CDX1_01_M01373 TRANSFAC - 27886602 27886617 2.0E-06 GAAGGTCATAATATGA 16 V_CDX1_01_M01373 TRANSFAC + 27890451 27890466 2.0E-06 AAAAATCATAAAAATC 16 V_HOXC12_01_M01437 TRANSFAC + 27890451 27890467 7.0E-06 AAAAATCATAAAAATCT 17 V_SPIB_01_M01204 TRANSFAC + 27890490 27890506 0.0E+00 AAAAAAAGGAAGTACTT 17 V_GATA1_09_M02254 TRANSFAC - 27890480 27890490 3.0E-06 TAAGATAAGAA 11 V_AP1_C_M00199 TRANSFAC - 27890511 27890519 3.0E-06 ATGAGTCAG 9 V_MEF2_Q6_01_M00941 TRANSFAC - 27890488 27890499 7.0E-06 TCCTTTTTTTAA 12 V_CETS1P54_01_M00032 TRANSFAC + 27886521 27886530 9.0E-06 ACAGGAAGTC 10 V_HOXA11_01_M01378 TRANSFAC + 27890451 27890466 2.0E-06 AAAAATCATAAAAATC 16 V_ATF1_04_M02842 TRANSFAC - 27890421 27890434 8.0E-06 TAATGAGGAATAAT 14 V_NKX23_01_M01457 TRANSFAC + 27886101 27886116 7.0E-06 TCTTAACCACTTAACT 16 V_FOXO1_Q5_M01216 TRANSFAC - 27886592 27886600 1.0E-06 AAAAACAAA 9 V_NKX32_02_M01482 TRANSFAC + 27886102 27886118 0.0E+00 CTTAACCACTTAACTAT 17 V_CETS1P54_03_M01078 TRANSFAC + 27886518 27886533 8.0E-06 GCAACAGGAAGTCATT 16 V_CETS1P54_03_M01078 TRANSFAC - 27890566 27890581 6.0E-06 ACTACAGGAAGTTGGC 16 V_HOXD9_Q2_M01834 TRANSFAC + 27890454 27890463 2.0E-06 AATCATAAAA 10 V_ELF1_Q6_M00746 TRANSFAC + 27886518 27886529 7.0E-06 GCAACAGGAAGT 12 V_ELF1_Q6_M00746 TRANSFAC - 27890570 27890581 9.0E-06 ACTACAGGAAGT 12 V_MTF1_06_M02882 TRANSFAC + 27886131 27886144 4.0E-06 ATTTCAGAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC + 27890453 27890466 2.0E-06 AAATCATAAAAATC 14 V_NKX25_03_M01414 TRANSFAC + 27886103 27886118 1.0E-06 TTAACCACTTAACTAT 16 V_GATA1_04_M00128 TRANSFAC - 27890479 27890491 2.0E-06 TTAAGATAAGAAG 13 V_FOXL1_02_M02857 TRANSFAC - 27890406 27890421 6.0E-06 TTTTCAAAATAAACCT 16 V_SIRT6_01_M01797 TRANSFAC - 27890481 27890488 7.0E-06 AGATAAGA 8 V_ERR1_Q2_M00511 TRANSFAC - 27886608 27886621 2.0E-06 ATGAGAAGGTCATA 14 V_CPHX_01_M01478 TRANSFAC + 27887552 27887565 1.0E-05 GTGAAGGAATCAAG 14 V_NKX22_01_M00485 TRANSFAC - 27886105 27886114 1.0E-06 TTAAGTGGTT 10 V_FOX_Q2_M00809 TRANSFAC + 27890404 27890416 5.0E-06 TTAGGTTTATTTT 13 V_PBX1_02_M00124 TRANSFAC + 27886501 27886515 9.0E-06 CTTCTCAATCAAGCT 15 V_ETS1_B_M00339 TRANSFAC + 27886521 27886535 1.0E-06 ACAGGAAGTCATTAC 15 V_HSF_Q6_M00641 TRANSFAC + 27886245 27886257 7.0E-06 CTCCAGGGGTTTC 13 V_SRF_06_M02916 TRANSFAC + 27886131 27886147 7.0E-06 ATTTCAGAAAAAAAATA 17 V_SRF_06_M02916 TRANSFAC + 27886132 27886148 1.0E-06 TTTCAGAAAAAAAATAA 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 27886913 27886930 6.0E-06 GGAGGTACAGAAGGAAGG 18 V_NFE2_Q6_M02104 TRANSFAC + 27890510 27890525 5.0E-06 CCTGACTCATCTCATT 16 V_SOX2_Q6_M01272 TRANSFAC + 27886586 27886601 4.0E-06 AACCGTTTTGTTTTTC 16 V_IRF1_01_M00062 TRANSFAC - 27886589 27886601 5.0E-06 GAAAAACAAAACG 13 V_HOXC10_01_M01361 TRANSFAC + 27890451 27890466 5.0E-06 AAAAATCATAAAAATC 16 V_MEF2_01_M00006 TRANSFAC - 27890406 27890421 2.0E-06 TTTTCAAAATAAACCT 16 V_GATA5_03_M02756 TRANSFAC - 27890477 27890493 4.0E-06 TTTTAAGATAAGAAGAA 17 V_FOXO4_01_M00472 TRANSFAC - 27886590 27886600 1.0E-05 AAAAACAAAAC 11 V_HMEF2_Q6_M00406 TRANSFAC - 27890406 27890421 8.0E-06 TTTTCAAAATAAACCT 16 V_ELF5_04_M02241 TRANSFAC - 27890495 27890503 4.0E-06 TACTTCCTT 9 V_HOXA10_01_M01464 TRANSFAC + 27890452 27890467 3.0E-06 AAAATCATAAAAATCT 16 V_SOX5_07_M02909 TRANSFAC + 27888038 27888054 1.0E-05 GCAAATATTGTTGGAGA 17 V_GATA6_04_M02757 TRANSFAC - 27890477 27890493 1.0E-06 TTTTAAGATAAGAAGAA 17 V_TCF3_05_M02920 TRANSFAC + 27886133 27886147 4.0E-06 TTCAGAAAAAAAATA 15 V_CEBPG_Q6_01_M01869 TRANSFAC + 27887542 27887553 9.0E-06 GATTACGAAAGT 12 V_SMAD1_01_M01590 TRANSFAC - 27890473 27890484 1.0E-05 AAGAAGAAAGAC 12 V_SPI1_02_M02043 TRANSFAC + 27890494 27890503 3.0E-06 AAAGGAAGTA 10 V_CEBPA_Q6_M01866 TRANSFAC + 27890410 27890422 9.0E-06 TTATTTTGAAAAT 13 V_NANOG_02_M01247 TRANSFAC - 27886585 27886604 4.0E-06 TGAGAAAAACAAAACGGTTA 20 V_NANOG_02_M01247 TRANSFAC - 27886591 27886610 8.0E-06 ATAATATGAGAAAAACAAAA 20 V_NKX21_01_M01312 TRANSFAC + 27886103 27886118 1.0E-06 TTAACCACTTAACTAT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.