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PTRH1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 138428 peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae) chr9 - 130477436 - 130482936 130477936 Transcription Factor Binding Sites   Download all TFBS in the PTRH1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXD12_homeodomain_DBD_monomeric_9_1 SELEX + 130478260 130478268 2.0E-06 CTAATAAAA 9 SP3_C2H2_DBD_monomeric_11_1 SELEX - 130478307 130478317 3.0E-06 GCCACGCCCCC 11 YY2_C2H2_full_dimeric_12_1 SELEX + 130478564 130478575 9.0E-06 CCTGGCCGCCAT 12 ETV5_ETS_DBD_monomeric_10_1 SELEX + 130473573 130473582 6.0E-06 ACCGGATGTG 10 KLF16_C2H2_DBD_monomeric_11_1 SELEX - 130478307 130478317 1.0E-06 GCCACGCCCCC 11 FOXA1_MA0148.1 JASPAR - 130473704 130473714 4.0E-06 TGTTTGCACAG 11 ETV3_ETS_DBD_monomeric_10_1 SELEX + 130473573 130473582 6.0E-06 ACCGGATGTG 10 YY1_C2H2_full_monomeric_11_1 SELEX - 130477762 130477772 6.0E-06 TCGGCCATTAT 11 ETV1_ETS_DBD_monomeric_10_1 SELEX + 130473573 130473582 9.0E-06 ACCGGATGTG 10 XBP1_bZIP_DBD_dimeric_12_1 SELEX + 130477947 130477958 4.0E-06 CCTGACGTCATC 12 XBP1_bZIP_DBD_dimeric_12_1 SELEX - 130477947 130477958 1.0E-06 GATGACGTCAGG 12 Creb5_bZIP_DBD_dimeric_12_1 SELEX + 130477947 130477958 7.0E-06 CCTGACGTCATC 12 KLF13_C2H2_full_monomeric_18_1 SELEX - 130473439 130473456 6.0E-06 TGGGCACACCCCTTTGTG 18 JDP2_bZIP_full_dimeric_12_1 SELEX + 130477947 130477958 4.0E-06 CCTGACGTCATC 12 JDP2_bZIP_full_dimeric_12_1 SELEX - 130477947 130477958 5.0E-06 GATGACGTCAGG 12 RFX2_RFX_DBD_dimeric_15_1 SELEX - 130478350 130478364 1.0E-06 CGTTGCTAGGCACCA 15 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX + 130478259 130478268 5.0E-06 GCTAATAAAA 10 HOXC12_homeodomain_DBD_monomeric_9_1 SELEX + 130478260 130478268 7.0E-06 CTAATAAAA 9 HOXD13_homeodomain_DBD_monomeric_10_1 SELEX + 130478260 130478269 7.0E-06 CTAATAAAAG 10 ATF7_bZIP_DBD_dimeric_14_1 SELEX + 130477946 130477959 7.0E-06 CCCTGACGTCATCA 14 ATF7_bZIP_DBD_dimeric_14_1 SELEX - 130477946 130477959 8.0E-06 TGATGACGTCAGGG 14 RFX3_RFX_DBD_dimeric_15_1 SELEX - 130478350 130478364 1.0E-06 CGTTGCTAGGCACCA 15 SP4_C2H2_full_monomeric_17_1 SELEX - 130478304 130478320 5.0E-06 CTGGCCACGCCCCCGGG 17 CREB3_bZIP_full_dimeric_14_1 SELEX + 130477946 130477959 1.0E-06 CCCTGACGTCATCA 14 SP1_C2H2_DBD_monomeric_11_1 SELEX - 130478307 130478317 5.0E-06 GCCACGCCCCC 11 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 130478260 130478269 9.0E-06 CTAATAAAAG 10 RFX4_RFX_DBD_dimeric_15_1 SELEX - 130478350 130478364 3.0E-06 CGTTGCTAGGCACCA 15 Hltf_MA0109.1 JASPAR - 130478263 130478272 2.0E-06 AAACTTTTAT 10 Myf_MA0055.1 JASPAR + 130473710 130473721 6.0E-06 AAACAGCTGGAG 12 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 130478260 130478269 5.0E-06 CTAATAAAAG 10 SPDEF_ETS_full_monomeric_11_1 SELEX + 130473572 130473582 1.0E-06 AACCGGATGTG 11 BATF3_bZIP_DBD_dimeric_14_1 SELEX + 130477946 130477959 2.0E-06 CCCTGACGTCATCA 14 BATF3_bZIP_DBD_dimeric_14_1 SELEX - 130477946 130477959 1.0E-06 TGATGACGTCAGGG 14 CDX2_homeodomain_DBD_monomeric_9_1 SELEX + 130478260 130478268 9.0E-06 CTAATAAAA 9 V_RUSH1A_02_M01107 TRANSFAC - 130478263 130478272 2.0E-06 AAACTTTTAT 10 V_MEQ_01_M02049 TRANSFAC + 130477854 130477862 4.0E-06 AAAACACAT 9 V_CEBPG_Q6_M00622 TRANSFAC + 130478422 130478434 1.0E-05 CTCATGACAGATT 13 V_SAP1A_01_M01167 TRANSFAC + 130473572 130473582 6.0E-06 AACCGGATGTG 11 V_E2A_Q6_01_M02088 TRANSFAC - 130473625 130473637 6.0E-06 GGCCATCTGCAGG 13 V_MEQCJUN_02_M02048 TRANSFAC - 130477948 130477958 5.0E-06 GATGACGTCAG 11 V_AR_02_M00953 TRANSFAC - 130473690 130473716 1.0E-06 GCTGTTTGCACAGATTGTTCTGTCTTC 27 V_BACH2_01_M00490 TRANSFAC - 130474452 130474462 8.0E-06 GATGAGTCAAC 11 V_SMAD3_Q6_01_M01888 TRANSFAC - 130473469 130473481 4.0E-06 GGTCAGACAGAGC 13 V_CREB_Q4_M00178 TRANSFAC + 130477947 130477958 4.0E-06 CCTGACGTCATC 12 V_TCF4_Q5_01_M02033 TRANSFAC + 130473602 130473611 7.0E-06 ATCAAAGAGA 10 V_IK_Q5_M01169 TRANSFAC + 130478167 130478176 8.0E-06 GTTGGGAGGC 10 V_SATB1_Q3_M01723 TRANSFAC + 130477758 130477773 5.0E-06 GGACATAATGGCCGAA 16 V_AR_Q6_01_M01996 TRANSFAC - 130473695 130473709 8.0E-06 GCACAGATTGTTCTG 15 V_CREB_Q4_01_M00917 TRANSFAC - 130477949 130477959 5.0E-06 TGATGACGTCA 11 V_PLAG1_02_M01973 TRANSFAC + 130478187 130478202 7.0E-06 CCCCCGCTATGGCCCT 16 V_ATF3_Q6_01_M01863 TRANSFAC - 130477947 130477957 4.0E-06 ATGACGTCAGG 11 V_JUNDM2_03_M02772 TRANSFAC + 130477945 130477960 2.0E-06 CCCCTGACGTCATCAC 16 V_HOXD13_01_M01404 TRANSFAC + 130478257 130478272 3.0E-06 CAGCTAATAAAAGTTT 16 V_ATF4_Q2_M00514 TRANSFAC + 130477947 130477958 7.0E-06 CCTGACGTCATC 12 V_CETS2_02_M02064 TRANSFAC + 130473573 130473582 1.0E-05 ACCGGATGTG 10 V_AR_03_M00956 TRANSFAC - 130473690 130473716 2.0E-06 GCTGTTTGCACAGATTGTTCTGTCTTC 27 V_PDEF_02_M02075 TRANSFAC + 130473573 130473582 8.0E-06 ACCGGATGTG 10 V_TAL1_Q6_M00993 TRANSFAC - 130473711 130473720 7.0E-06 TCCAGCTGTT 10 V_MYF_01_M01302 TRANSFAC + 130473710 130473721 6.0E-06 AAACAGCTGGAG 12 V_ELK1_05_M01981 TRANSFAC + 130473573 130473582 9.0E-06 ACCGGATGTG 10 V_PR_01_M00954 TRANSFAC - 130473690 130473716 8.0E-06 GCTGTTTGCACAGATTGTTCTGTCTTC 27 V_HOXB13_01_M01467 TRANSFAC + 130478257 130478272 2.0E-06 CAGCTAATAAAAGTTT 16 V_SAP1A_02_M01983 TRANSFAC + 130473573 130473582 9.0E-06 ACCGGATGTG 10 V_RFX1_01_M00280 TRANSFAC + 130478349 130478365 3.0E-06 ATGGTGCCTAGCAACGT 17 V_RFXDC2_03_M02790 TRANSFAC + 130478352 130478366 8.0E-06 GTGCCTAGCAACGTC 15 V_REX1_03_M01744 TRANSFAC - 130478032 130478043 9.0E-06 AGCATGGCGGCC 12 V_GR_01_M00955 TRANSFAC - 130473690 130473716 7.0E-06 GCTGTTTGCACAGATTGTTCTGTCTTC 27 V_CREB_Q2_01_M00916 TRANSFAC - 130477945 130477958 4.0E-06 GATGACGTCAGGGG 14 V_CREB_Q2_01_M00916 TRANSFAC + 130477947 130477960 5.0E-06 CCTGACGTCATCAC 14 V_KAISO_01_M01119 TRANSFAC - 130478505 130478514 6.0E-06 TTCCTGCGAA 10 V_CETS1P54_03_M01078 TRANSFAC + 130473570 130473585 4.0E-06 CGAACCGGATGTGGGA 16 V_NEUROD_02_M01288 TRANSFAC - 130473710 130473721 9.0E-06 CTCCAGCTGTTT 12 V_GR_Q6_02_M01836 TRANSFAC - 130473694 130473706 6.0E-06 CAGATTGTTCTGT 13 V_ZFP105_04_M02931 TRANSFAC + 130477673 130477689 9.0E-06 GAGCTTCAAGAAGTTTG 17 V_CREM_Q6_M01820 TRANSFAC + 130477949 130477959 4.0E-06 TGACGTCATCA 11 V_YY1_03_M02044 TRANSFAC - 130477761 130477772 4.0E-06 TCGGCCATTATG 12 V_CAAT_01_M00254 TRANSFAC + 130473541 130473552 9.0E-06 CGTGGCCAATGA 12 V_ATF1_Q6_M00691 TRANSFAC + 130477946 130477956 1.0E-06 CCCTGACGTCA 11 V_ERM_02_M02069 TRANSFAC + 130473573 130473582 9.0E-06 ACCGGATGTG 10 V_MTF1_06_M02882 TRANSFAC + 130477715 130477728 9.0E-06 AGTTAAGAAAACAG 14 V_PDEF_01_M02040 TRANSFAC + 130473573 130473582 5.0E-06 ACCGGATGTG 10 V_ATF1_03_M02738 TRANSFAC - 130477945 130477960 4.0E-06 GTGATGACGTCAGGGG 16 V_ATF2_Q5_M01862 TRANSFAC + 130477946 130477957 2.0E-06 CCCTGACGTCAT 12 V_MEF3_B_M00319 TRANSFAC - 130477611 130477623 9.0E-06 GGGTCGGGTTTCT 13 V_NUR77_Q5_M01217 TRANSFAC + 130478157 130478166 7.0E-06 TTGACCTTCG 10 V_CETS1_02_M02063 TRANSFAC + 130473573 130473582 9.0E-06 ACCGGATGTG 10 V_ERR1_Q2_01_M02093 TRANSFAC - 130478155 130478165 7.0E-06 GAAGGTCAAGC 11 V_EFC_Q6_M00626 TRANSFAC - 130478351 130478364 4.0E-06 CGTTGCTAGGCACC 14 V_PR_02_M00957 TRANSFAC - 130473690 130473716 5.0E-06 GCTGTTTGCACAGATTGTTCTGTCTTC 27 V_CREB_02_M00113 TRANSFAC - 130477949 130477960 1.0E-06 GTGATGACGTCA 12 V_FREAC4_01_M00292 TRANSFAC - 130474447 130474462 9.0E-06 GATGAGTCAACAGCCT 16 V_FREAC4_01_M00292 TRANSFAC + 130477716 130477731 7.0E-06 GTTAAGAAAACAGAGC 16 V_HOXD10_01_M01375 TRANSFAC + 130478257 130478273 2.0E-06 CAGCTAATAAAAGTTTT 17 V_MIF1_01_M00279 TRANSFAC - 130478348 130478365 5.0E-06 ACGTTGCTAGGCACCATC 18 V_TCF4_01_M01705 TRANSFAC - 130473601 130473609 5.0E-06 TCTTTGATG 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.