Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

C19orf47


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
126526 chromosome 19 open reading frame 47 chr19 -40853816 - 40859434 40854316

Transcription Factor Binding Sites

 
Download all TFBS in the C19orf47 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
NEUROD2_bHLH_full_dimeric_10_1 SELEX + 40855030 40855039 2.0E-06 GCCATATGTT 10
NEUROD2_bHLH_full_dimeric_10_1 SELEX - 40855030 40855039 1.0E-05 AACATATGGC 10
SPIC_ETS_full_monomeric_14_1 SELEX - 40850661 40850674 1.0E-06 AGAATCAGGAAGAA 14
FOXL1_forkhead_full_dimeric_13_1 SELEX + 40852770 40852782 2.0E-06 AGTTAATAAACAG 13
Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX + 40854465 40854474 2.0E-06 GTCACGTGAC 10
Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX - 40854465 40854474 2.0E-06 GTCACGTGAC 10
NFYA_MA0060.1 JASPAR + 40854523 40854538 3.0E-06 CGCGGCCAATGAGAAA 16
ISL2_homeodomain_DBD_monomeric_8_1 SELEX - 40852814 40852821 1.0E-05 GCACTTAA 8
XBP1_bZIP_DBD_dimeric_12_1 SELEX - 40855172 40855183 9.0E-06 GATGACGTAAGA 12
USF1_bHLH_DBD_dimeric_10_1 SELEX + 40854465 40854474 3.0E-06 GTCACGTGAC 10
USF1_bHLH_DBD_dimeric_10_1 SELEX - 40854465 40854474 3.0E-06 GTCACGTGAC 10
NKX3-1_homeodomain_full_monomeric_9_1 SELEX + 40854876 40854884 5.0E-06 CCCACTTAA 9
BHLHE23_bHLH_DBD_dimeric_10_1 SELEX + 40855030 40855039 7.0E-06 GCCATATGTT 10
Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 40852771 40852781 3.0E-06 GTTAATAAACA 11
BHLHE41_bHLH_full_dimeric_10_1 SELEX - 40854465 40854474 1.0E-06 GTCACGTGAC 10
ATF7_bZIP_DBD_dimeric_14_1 SELEX - 40855171 40855184 9.0E-06 TGATGACGTAAGAG 14
FOXO4_forkhead_DBD_putatively-multimeric_12_1 SELEX + 40855263 40855274 6.0E-06 TTTCCCCATAAG 12
BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 40855029 40855040 6.0E-06 TAACATATGGCG 12
SREBF2_bHLH_DBD_dimeric_10_1 SELEX + 40854465 40854474 3.0E-06 GTCACGTGAC 10
SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 40854465 40854474 3.0E-06 GTCACGTGAC 10
Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX - 40854465 40854474 3.0E-06 GTCACGTGAC 10
OLIG1_bHLH_DBD_dimeric_10_1 SELEX + 40855030 40855039 9.0E-06 GCCATATGTT 10
OLIG1_bHLH_DBD_dimeric_10_1 SELEX - 40855030 40855039 4.0E-06 AACATATGGC 10
Srebf1_bHLH_DBD_dimeric_10_1 SELEX + 40854420 40854429 1.0E-06 ATCACGTGAC 10
Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 40854420 40854429 2.0E-06 GTCACGTGAT 10
Srebf1_bHLH_DBD_dimeric_10_1 SELEX + 40854465 40854474 3.0E-06 GTCACGTGAC 10
Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 40854465 40854474 3.0E-06 GTCACGTGAC 10
CREB3_bZIP_full_dimeric_14_1 SELEX + 40855171 40855184 9.0E-06 CTCTTACGTCATCA 14
Atf4_bZIP_DBD_dimeric_14_1 SELEX - 40855172 40855185 1.0E-05 ATGATGACGTAAGA 14
TFEB_bHLH_full_dimeric_10_1 SELEX + 40854420 40854429 1.0E-06 ATCACGTGAC 10
TFEB_bHLH_full_dimeric_10_1 SELEX - 40854420 40854429 5.0E-06 GTCACGTGAT 10
TFEB_bHLH_full_dimeric_10_1 SELEX + 40854465 40854474 3.0E-06 GTCACGTGAC 10
TFEB_bHLH_full_dimeric_10_1 SELEX - 40854465 40854474 3.0E-06 GTCACGTGAC 10
MZF1_5-13_MA0057.1 JASPAR - 40855264 40855273 1.0E-05 TTATGGGGAA 10
POU1F1_POU_DBD_monomeric_17_1 SELEX - 40850485 40850501 2.0E-06 CTGATGCATAGTTAGTG 17
NKX2-3_homeodomain_full_monomeric_10_1 SELEX + 40854876 40854885 5.0E-06 CCCACTTAAA 10
Atoh1_bHLH_DBD_dimeric_10_1 SELEX + 40855030 40855039 1.0E-05 GCCATATGTT 10
Atoh1_bHLH_DBD_dimeric_10_1 SELEX - 40855030 40855039 2.0E-06 AACATATGGC 10
MLXIPL_bHLH_full_dimeric_10_1 SELEX + 40854420 40854429 5.0E-06 ATCACGTGAC 10
MLXIPL_bHLH_full_dimeric_10_1 SELEX - 40854420 40854429 1.0E-06 GTCACGTGAT 10
PPARG_MA0066.1 JASPAR + 40855174 40855193 9.0E-06 TTACGTCATCATTACCCCTT 20
TFE3_bHLH_DBD_dimeric_10_1 SELEX - 40854465 40854474 4.0E-06 GTCACGTGAC 10
TFEC_bHLH_DBD_dimeric_10_1 SELEX - 40854465 40854474 8.0E-06 GTCACGTGAC 10
NEUROG2_bHLH_full_dimeric_10_1 SELEX - 40855030 40855039 4.0E-06 AACATATGGC 10
Mafb_bZIP_DBD_dimeric_18_1 SELEX - 40855169 40855186 1.0E-05 AATGATGACGTAAGAGTT 18
MLX_bHLH_full_dimeric_10_1 SELEX + 40854420 40854429 2.0E-06 ATCACGTGAC 10
MLX_bHLH_full_dimeric_10_1 SELEX - 40854420 40854429 1.0E-06 GTCACGTGAT 10
MLX_bHLH_full_dimeric_10_1 SELEX + 40854465 40854474 5.0E-06 GTCACGTGAC 10
MLX_bHLH_full_dimeric_10_1 SELEX - 40854465 40854474 5.0E-06 GTCACGTGAC 10
BATF3_bZIP_DBD_dimeric_14_1 SELEX - 40855171 40855184 6.0E-06 TGATGACGTAAGAG 14
ARNTL_bHLH_DBD_dimeric_10_1 SELEX + 40854420 40854429 3.0E-06 ATCACGTGAC 10
ARNTL_bHLH_DBD_dimeric_10_1 SELEX - 40854420 40854429 2.0E-06 GTCACGTGAT 10
ARNTL_bHLH_DBD_dimeric_10_1 SELEX + 40854465 40854474 1.0E-06 GTCACGTGAC 10
ARNTL_bHLH_DBD_dimeric_10_1 SELEX - 40854465 40854474 1.0E-06 GTCACGTGAC 10
BHLHA15_bHLH_DBD_dimeric_10_1 SELEX - 40855030 40855039 6.0E-06 AACATATGGC 10
TBX1_TBX_DBD_dimeric_20_1 SELEX + 40852816 40852835 3.0E-06 AAGTGCGATGTTAAGTGTGC 20
OLIG2_bHLH_full_dimeric_10_1 SELEX + 40855030 40855039 7.0E-06 GCCATATGTT 10
OLIG2_bHLH_full_dimeric_10_1 SELEX - 40855030 40855039 5.0E-06 AACATATGGC 10
BHLHB3_bHLH_full_dimeric_10_1 SELEX + 40854420 40854429 3.0E-06 ATCACGTGAC 10
BHLHB3_bHLH_full_dimeric_10_1 SELEX + 40854465 40854474 2.0E-06 GTCACGTGAC 10
BHLHB3_bHLH_full_dimeric_10_1 SELEX - 40854465 40854474 2.0E-06 GTCACGTGAC 10
OLIG3_bHLH_DBD_dimeric_10_1 SELEX + 40855030 40855039 9.0E-06 GCCATATGTT 10
OLIG3_bHLH_DBD_dimeric_10_1 SELEX - 40855030 40855039 5.0E-06 AACATATGGC 10
HNF1A_MA0046.1 JASPAR + 40852770 40852783 7.0E-06 AGTTAATAAACAGA 14
V_USF_Q6_M00187 TRANSFAC - 40854420 40854429 7.0E-06 GTCACGTGAT 10
V_USF_Q6_M00187 TRANSFAC + 40854465 40854474 4.0E-06 GTCACGTGAC 10
V_USF_Q6_M00187 TRANSFAC - 40854465 40854474 4.0E-06 GTCACGTGAC 10
V_GEN_INI_B_M00315 TRANSFAC + 40855081 40855088 1.0E-05 CCTCATTT 8
V_SRY_07_M02813 TRANSFAC + 40854743 40854758 8.0E-06 ATGGAATATAATATAT 16
V_SRY_07_M02813 TRANSFAC + 40854764 40854779 8.0E-06 ATGGAATATAATATAT 16
V_SMAD3_Q6_01_M01888 TRANSFAC + 40850457 40850469 1.0E-06 AGTCAGACAGAAC 13
V_XPF1_Q6_M00684 TRANSFAC - 40855222 40855231 3.0E-06 TCAGAGGAAC 10
V_RHOX11_01_M01347 TRANSFAC + 40852817 40852833 6.0E-06 AGTGCGATGTTAAGTGT 17
V_ARNT_02_M00539 TRANSFAC + 40854415 40854434 2.0E-06 TAACCATCACGTGACCGCCC 20
V_ARNT_02_M00539 TRANSFAC - 40854415 40854434 2.0E-06 GGGCGGTCACGTGATGGTTA 20
V_ARNT_02_M00539 TRANSFAC + 40854460 40854479 2.0E-06 TAACCGTCACGTGACCGCCC 20
V_ARNT_02_M00539 TRANSFAC - 40854460 40854479 2.0E-06 GGGCGGTCACGTGACGGTTA 20
V_ATF4_Q6_M01864 TRANSFAC + 40855175 40855183 6.0E-06 TACGTCATC 9
V_CREB_Q4_01_M00917 TRANSFAC - 40855174 40855184 4.0E-06 TGATGACGTAA 11
V_CREB_01_M00039 TRANSFAC - 40855174 40855181 1.0E-05 TGACGTAA 8
V_JUNDM2_03_M02772 TRANSFAC + 40855170 40855185 2.0E-06 ACTCTTACGTCATCAT 16
V_PU1_Q4_M01172 TRANSFAC + 40858390 40858408 3.0E-06 TTGCTCCATTTCCTCTCTC 19
V_HOXD13_01_M01404 TRANSFAC + 40855068 40855083 6.0E-06 TCCTTTATAAAATCCT 16
V_SOX21_03_M02803 TRANSFAC + 40854743 40854758 4.0E-06 ATGGAATATAATATAT 16
V_SOX21_03_M02803 TRANSFAC + 40854764 40854779 4.0E-06 ATGGAATATAATATAT 16
V_CDX_Q5_M00991 TRANSFAC - 40854047 40854064 9.0E-06 TATCACCGGCTTTATAAA 18
V_RHOX11_02_M01384 TRANSFAC + 40852817 40852833 9.0E-06 AGTGCGATGTTAAGTGT 17
V_BARBIE_01_M00238 TRANSFAC - 40855045 40855059 1.0E-06 AACAAAAGCAGGATG 15
V_RPC155_01_M01798 TRANSFAC + 40858374 40858389 2.0E-06 GCTTGGGTTCAAATCC 16
V_ELF4_04_M02850 TRANSFAC + 40850647 40850663 1.0E-05 GATTCAAAAACAAGTTC 17
V_GEN_INI3_B_M00314 TRANSFAC + 40855081 40855088 1.0E-05 CCTCATTT 8
V_ZFP105_03_M02827 TRANSFAC + 40852836 40852850 1.0E-05 ATCAAATAAAACAAA 15
V_SREBP1_01_M00220 TRANSFAC + 40854419 40854429 1.0E-06 CATCACGTGAC 11
V_SREBP1_01_M00220 TRANSFAC - 40854420 40854430 4.0E-06 GGTCACGTGAT 11
V_SREBP1_01_M00220 TRANSFAC + 40854464 40854474 5.0E-06 CGTCACGTGAC 11
V_SREBP1_01_M00220 TRANSFAC - 40854465 40854475 5.0E-06 GGTCACGTGAC 11
V_IRF2_01_M00063 TRANSFAC - 40855254 40855266 6.0E-06 GAAAACTGGAAGC 13
V_ARID3A_02_M02839 TRANSFAC - 40854755 40854769 3.0E-06 TTCCATATAATATAT 15
V_MAZ_Q6_01_M02023 TRANSFAC - 40854493 40854506 5.0E-06 GGCGGAGGGGAGCG 14
V_SOX_Q6_M01014 TRANSFAC - 40852788 40852800 2.0E-06 ATCTTTGTTCTAA 13
V_E4F1_Q6_01_M02091 TRANSFAC - 40855173 40855182 3.0E-06 ATGACGTAAG 10
V_CREBATF_Q6_M00981 TRANSFAC - 40855174 40855182 9.0E-06 ATGACGTAA 9
V_SPIB_01_M01204 TRANSFAC - 40850658 40850674 1.0E-06 AGAATCAGGAAGAACTT 17
V_XFD2_01_M00268 TRANSFAC + 40852772 40852785 3.0E-06 TTAATAAACAGAGT 14
V_VMYB_01_M00003 TRANSFAC - 40855289 40855298 7.0E-06 AATAACTGTA 10
V_TBP_06_M02814 TRANSFAC + 40854748 40854763 1.0E-06 ATATAATATATATTAT 16
V_TBP_06_M02814 TRANSFAC - 40854748 40854763 1.0E-06 ATAATATATATTATAT 16
V_TBP_06_M02814 TRANSFAC + 40854750 40854765 1.0E-06 ATAATATATATTATAT 16
V_TBP_06_M02814 TRANSFAC - 40854750 40854765 1.0E-06 ATATAATATATATTAT 16
V_ATF1_04_M02842 TRANSFAC - 40855017 40855030 7.0E-06 CGATGACGAATTTA 14
V_SOX11_03_M02795 TRANSFAC + 40852787 40852803 3.0E-06 CTTAGAACAAAGATGCA 17
V_PAX8_B_M00328 TRANSFAC + 40854733 40854750 9.0E-06 GCTATAATGCATGGAATA 18
V_FOXO1_Q5_M01216 TRANSFAC + 40850652 40850660 8.0E-06 AAAAACAAG 9
V_NEUROD_02_M01288 TRANSFAC + 40858268 40858279 5.0E-06 CAGCTGCTGTCC 12
V_NKX25_03_M01414 TRANSFAC + 40854873 40854888 3.0E-06 CATCCCACTTAAATCC 16
V_STRA13_01_M00985 TRANSFAC + 40854418 40854431 3.0E-06 CCATCACGTGACCG 14
V_STRA13_01_M00985 TRANSFAC - 40854418 40854431 8.0E-06 CGGTCACGTGATGG 14
V_STRA13_01_M00985 TRANSFAC + 40854463 40854476 1.0E-06 CCGTCACGTGACCG 14
V_STRA13_01_M00985 TRANSFAC - 40854463 40854476 7.0E-06 CGGTCACGTGACGG 14
V_CNOT3_01_M01253 TRANSFAC - 40854520 40854529 4.0E-06 GGCCGCGCCG 10
V_TFEB_01_M01768 TRANSFAC + 40854420 40854429 2.0E-06 ATCACGTGAC 10
V_TFEB_01_M01768 TRANSFAC - 40854420 40854429 2.0E-06 GTCACGTGAT 10
V_TFEB_01_M01768 TRANSFAC + 40854465 40854474 3.0E-06 GTCACGTGAC 10
V_TFEB_01_M01768 TRANSFAC - 40854465 40854474 3.0E-06 GTCACGTGAC 10
V_FOXL1_02_M02857 TRANSFAC + 40852838 40852853 6.0E-06 CAAATAAAACAAATCT 16
V_ATF1_03_M02738 TRANSFAC + 40855170 40855185 3.0E-06 ACTCTTACGTCATCAT 16
V_ATF1_03_M02738 TRANSFAC - 40855170 40855185 3.0E-06 ATGATGACGTAAGAGT 16
V_GEN_INI2_B_M00313 TRANSFAC + 40855081 40855088 1.0E-05 CCTCATTT 8
V_ZBTB12_04_M02928 TRANSFAC + 40852783 40852797 7.0E-06 AGTCCTTAGAACAAA 15
V_RHOX11_05_M03099 TRANSFAC + 40852817 40852833 9.0E-06 AGTGCGATGTTAAGTGT 17
V_ZFP206_01_M01742 TRANSFAC + 40854580 40854590 8.0E-06 TGCGCCTGCGC 11
V_ZFP206_01_M01742 TRANSFAC - 40854581 40854591 4.0E-06 CGCGCAGGCGC 11
V_NFY_01_M00287 TRANSFAC + 40854523 40854538 3.0E-06 CGCGGCCAATGAGAAA 16
V_BDP1_01_M01796 TRANSFAC - 40858378 40858389 0.0E+00 GGATTTGAACCC 12
V_FPM315_01_M01587 TRANSFAC - 40854297 40854308 5.0E-06 GGGGGAGGAGTG 12
V_FOX_Q2_M00809 TRANSFAC - 40852772 40852784 5.0E-06 CTCTGTTTATTAA 13
V_PLZF_02_M01075 TRANSFAC - 40854746 40854774 1.0E-05 TTATATTCCATATAATATATATTATATTC 29
V_E4F1_Q6_M00694 TRANSFAC + 40855173 40855182 9.0E-06 CTTACGTCAT 10
V_SMAD3_Q6_M00701 TRANSFAC - 40850457 40850465 6.0E-06 TGTCTGACT 9
V_FOXO1_01_M00473 TRANSFAC + 40850651 40850660 9.0E-06 CAAAAACAAG 10
V_CREB_02_M00113 TRANSFAC - 40855174 40855185 6.0E-06 ATGATGACGTAA 12
V_FOXO4_01_M00472 TRANSFAC + 40850652 40850662 4.0E-06 AAAAACAAGTT 11
V_HOXA10_01_M01464 TRANSFAC + 40854747 40854762 9.0E-06 AATATAATATATATTA 16
V_NFYA_Q5_M02106 TRANSFAC + 40854525 40854538 1.0E-06 CGGCCAATGAGAAA 14
V_HOXD10_01_M01375 TRANSFAC + 40852835 40852851 3.0E-06 CATCAAATAAAACAAAT 17
V_HNF1A_01_M02162 TRANSFAC + 40852770 40852783 7.0E-06 AGTTAATAAACAGA 14
V_BRF1_01_M01747 TRANSFAC + 40858378 40858390 1.0E-06 GGGTTCAAATCCT 13
V_RHOX11_06_M03100 TRANSFAC + 40852817 40852833 6.0E-06 AGTGCGATGTTAAGTGT 17
V_RFX1_02_M00281 TRANSFAC - 40855055 40855072 3.0E-06 AAGGAGAAATGGCAACAA 18
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL