Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

HSPB6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 126393 heat shock protein, alpha-crystallin-related, B6 chr19 - 36247430 - 36252930 36247930 Transcription Factor Binding Sites   Download all TFBS in the HSPB6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 36252165 36252175 7.0E-06 AGTGACTCATT 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 36252165 36252175 9.0E-06 AATGAGTCACT 11 CTCF_MA0139.1 JASPAR + 36248132 36248150 6.0E-06 TTTCCAGAAGAGGAAACTA 19 SPIC_ETS_full_monomeric_14_1 SELEX - 36249570 36249583 5.0E-06 AAAAAAAGAAAGAA 14 EWSR1-FLI1_MA0149.1 JASPAR + 36246587 36246604 5.0E-06 GGAGGGGAGGGAGGCTTG 18 SOX15_HMG_full_dimeric_15_3 SELEX - 36248716 36248730 7.0E-06 CTAACTACCATTCTT 15 TCF7L1_HMG_full_monomeric_12_1 SELEX - 36249440 36249451 1.0E-06 AAAGTTCAAAGA 12 TEAD1_TEA_full_monomeric_10_1 SELEX + 36247365 36247374 7.0E-06 AACATTCCTT 10 LEF1_HMG_DBD_monomeric_15_1 SELEX - 36249437 36249451 2.0E-06 AAAGTTCAAAGACAA 15 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 36249356 36249371 1.0E-05 TTATTGCCTCTAAAGG 16 USF1_bHLH_DBD_dimeric_10_1 SELEX - 36252069 36252078 8.0E-06 ACCACGTGAC 10 RFX2_RFX_DBD_dimeric_15_1 SELEX + 36249037 36249051 0.0E+00 CGTTGCTAAGCGACG 15 RUNX2_RUNX_DBD_monomeric_9_1 SELEX + 36248813 36248821 6.0E-06 TAACCGCAA 9 NKX3-1_homeodomain_full_monomeric_9_1 SELEX - 36246100 36246108 5.0E-06 CCCACTTAA 9 SP1_MA0079.2 JASPAR + 36247503 36247512 7.0E-06 CCCCGCCCCC 10 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 36248578 36248587 9.0E-06 ACCAGCTGCT 10 RFX3_RFX_DBD_dimeric_15_1 SELEX + 36249037 36249051 0.0E+00 CGTTGCTAAGCGACG 15 SP4_C2H2_full_monomeric_17_1 SELEX - 36249015 36249031 4.0E-06 TCAGCCCCGCCCCTCTC 17 SPDEF_ETS_full_putative-multimer_15_1 SELEX + 36247410 36247424 3.0E-06 GATTTCCCGGATCAC 15 ATF4_bZIP_DBD_dimeric_13_1 SELEX + 36248568 36248580 6.0E-06 AACTGATGCAACC 13 Atf4_bZIP_DBD_dimeric_14_1 SELEX + 36248567 36248580 9.0E-06 CAACTGATGCAACC 14 TFEB_bHLH_full_dimeric_10_1 SELEX - 36252069 36252078 4.0E-06 ACCACGTGAC 10 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 36249440 36249451 1.0E-06 AAAGTTCAAAGA 12 SP1_C2H2_DBD_monomeric_11_1 SELEX + 36246863 36246873 7.0E-06 ACCCCACCCCC 11 SP1_C2H2_DBD_monomeric_11_1 SELEX + 36247502 36247512 4.0E-06 ACCCCGCCCCC 11 RFX4_RFX_DBD_dimeric_15_1 SELEX + 36249037 36249051 0.0E+00 CGTTGCTAAGCGACG 15 PITX1_homeodomain_full_monomeric_9_1 SELEX + 36248244 36248252 5.0E-06 TTTAATCCA 9 MAX_MA0058.1 JASPAR - 36252070 36252079 4.0E-06 GACCACGTGA 10 JDP2_bZIP_full_dimeric_9_1 SELEX - 36252166 36252174 1.0E-05 ATGAGTCAC 9 TFE3_bHLH_DBD_dimeric_10_1 SELEX - 36252069 36252078 3.0E-06 ACCACGTGAC 10 ETS1_ETS_full_dimeric_18_1 SELEX + 36247267 36247284 5.0E-06 GCCGGGAACCCTTCCTCA 18 TEAD4_TEA_DBD_monomeric_10_1 SELEX + 36247365 36247374 4.0E-06 AACATTCCTT 10 TP53_MA0106.1 JASPAR - 36249249 36249268 1.0E-05 TGGAGCATGTTGGGAATTGT 20 ETV6_ETS_full_dimeric_15_1 SELEX - 36248953 36248967 9.0E-06 GAGGAAACAGAAGTA 15 ELF5_MA0136.1 JASPAR - 36246080 36246088 4.0E-06 TACTTCCTT 9 Sox1_HMG_DBD_dimeric_15_2 SELEX - 36248716 36248730 4.0E-06 CTAACTACCATTCTT 15 TP63_p53l_DBD_dimeric_18_1 SELEX - 36249248 36249265 3.0E-06 AGCATGTTGGGAATTGTA 18 RREB1_MA0073.1 JASPAR + 36247498 36247517 8.0E-06 CCCCACCCCGCCCCCCACCT 20 RREB1_MA0073.1 JASPAR + 36248680 36248699 6.0E-06 CCCCCCCCCAACCCGCCCCA 20 TEAD1_MA0090.1 JASPAR - 36249517 36249528 1.0E-06 TACATTCCTGGG 12 TEAD1_MA0090.1 JASPAR + 36252146 36252157 8.0E-06 TACATTCCTGGC 12 V_FOXP1_01_M00987 TRANSFAC + 36249566 36249585 4.0E-06 TTCTTTCTTTCTTTTTTTTT 20 V_HSF2_01_M00147 TRANSFAC - 36247363 36247372 1.0E-05 GGAATGTTCT 10 V_HSF2_01_M00147 TRANSFAC - 36247623 36247632 2.0E-06 AGAATGTTCG 10 V_KLF15_Q2_M01714 TRANSFAC - 36247296 36247309 7.0E-06 GAGGAGGGGAGAGG 14 V_AP1_Q2_M00173 TRANSFAC + 36252165 36252175 4.0E-06 AGTGACTCATT 11 V_USF_Q6_M00187 TRANSFAC + 36252069 36252078 5.0E-06 GTCACGTGGT 10 V_TCF3_01_M01594 TRANSFAC + 36249571 36249583 1.0E-06 TCTTTCTTTTTTT 13 V_LEF1_04_M02774 TRANSFAC + 36249436 36249452 8.0E-06 GTTGTCTTTGAACTTTC 17 V_FLI1_Q6_M01208 TRANSFAC + 36248334 36248344 8.0E-06 CAGGATGTCAG 11 V_FXR_Q3_M00631 TRANSFAC + 36247038 36247051 9.0E-06 CAAGGTCAGGAACC 14 V_AR_02_M00953 TRANSFAC - 36247357 36247383 3.0E-06 CCTGAGGGGAAGGAATGTTCTTAGTCT 27 V_TCFE2A_04_M02927 TRANSFAC - 36246334 36246350 2.0E-06 CCAGCCAGATGTCCCGA 17 V_ZFX_01_M01593 TRANSFAC - 36246440 36246455 3.0E-06 GCCCAGGCCCCACCGC 16 V_BCL6_01_M01183 TRANSFAC + 36249569 36249584 3.0E-06 TTTCTTTCTTTTTTTT 16 V_EBOX_Q6_01_M01034 TRANSFAC - 36252068 36252077 4.0E-06 CCACGTGACT 10 V_GABP_B_M00341 TRANSFAC + 36249091 36249102 5.0E-06 GCCGGAAGCGCG 12 V_SP1_Q6_01_M00931 TRANSFAC - 36246609 36246618 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 36246649 36246658 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 36247502 36247511 7.0E-06 GGGGCGGGGT 10 V_SP1_Q6_01_M00931 TRANSFAC + 36249019 36249028 4.0E-06 GGGGCGGGGC 10 V_IRF_Q6_01_M00972 TRANSFAC - 36249572 36249582 5.0E-06 AAAAAAGAAAG 11 V_ZFP740_03_M02834 TRANSFAC + 36248677 36248692 7.0E-06 CGCCCCCCCCCCAACC 16 V_IRF2_Q6_M01882 TRANSFAC - 36249569 36249584 1.0E-06 AAAAAAAAGAAAGAAA 16 V_PITX3_Q2_M01735 TRANSFAC - 36249546 36249554 4.0E-06 TGGATTATA 9 V_RFX4_03_M02789 TRANSFAC - 36249035 36249049 7.0E-06 TCGCTTAGCAACGCC 15 V_SP1_03_M02281 TRANSFAC + 36247503 36247512 7.0E-06 CCCCGCCCCC 10 V_STAT6_01_M00494 TRANSFAC - 36248516 36248523 7.0E-06 TATTTCCA 8 V_PITX2_Q6_M02114 TRANSFAC + 36252178 36252187 1.0E-06 TGTAATCCCA 10 V_SP1_02_M01303 TRANSFAC - 36247496 36247506 5.0E-06 GGGGTGGGGGG 11 V_SP1_02_M01303 TRANSFAC - 36247501 36247511 3.0E-06 GGGGCGGGGTG 11 V_HEN1_01_M00068 TRANSFAC - 36249117 36249138 2.0E-06 ATCGGCCTCACCTGCGGTCCAT 22 V_PU1_Q4_M01172 TRANSFAC - 36248137 36248155 3.0E-06 AGCCTTAGTTTCCTCTTCT 19 V_PU1_Q4_M01172 TRANSFAC + 36248953 36248971 0.0E+00 TACTTCTGTTTCCTCTCTT 19 V_PU1_Q4_M01172 TRANSFAC + 36249390 36249408 9.0E-06 GATCTGAATTTCTTCATTT 19 V_AP4_Q6_01_M00927 TRANSFAC + 36248578 36248586 6.0E-06 ACCAGCTGC 9 V_TCFAP2E_04_M02926 TRANSFAC - 36249577 36249590 1.0E-06 GTCTTAAAAAAAAA 14 V_AR_03_M00956 TRANSFAC - 36248347 36248373 3.0E-06 AGGGTAGGGAGGGCCTGTTCTATGTCC 27 V_PPARGRXRA_01_M02262 TRANSFAC - 36247000 36247014 8.0E-06 GCGGGGGAGAGGGCA 15 V_AP1_Q6_M00174 TRANSFAC + 36252165 36252175 2.0E-06 AGTGACTCATT 11 V_ELF4_04_M02850 TRANSFAC - 36249573 36249589 1.0E-06 TCTTAAAAAAAAAGAAA 17 V_ELF4_04_M02850 TRANSFAC - 36249574 36249590 7.0E-06 GTCTTAAAAAAAAAGAA 17 V_ELF4_04_M02850 TRANSFAC - 36249575 36249591 2.0E-06 TGTCTTAAAAAAAAAGA 17 V_BACH1_01_M00495 TRANSFAC - 36252163 36252177 9.0E-06 GGAATGAGTCACTGT 15 V_ZNF219_01_M01122 TRANSFAC + 36248677 36248688 1.0E-06 CGCCCCCCCCCC 12 V_GC_01_M00255 TRANSFAC - 36246607 36246620 4.0E-06 GAGGGGCGGGGCCG 14 V_GC_01_M00255 TRANSFAC - 36246647 36246660 9.0E-06 GTGGGGCGGGGCTG 14 V_GC_01_M00255 TRANSFAC + 36249017 36249030 1.0E-06 GAGGGGCGGGGCTG 14 V_TCF3_04_M02816 TRANSFAC - 36249436 36249452 7.0E-06 GAAAGTTCAAAGACAAC 17 V_POU3F2_01_M00463 TRANSFAC + 36249393 36249406 1.0E-06 CTGAATTTCTTCAT 14 V_PR_01_M00954 TRANSFAC - 36247357 36247383 0.0E+00 CCTGAGGGGAAGGAATGTTCTTAGTCT 27 V_PR_01_M00954 TRANSFAC - 36248347 36248373 4.0E-06 AGGGTAGGGAGGGCCTGTTCTATGTCC 27 V_ZFP105_03_M02827 TRANSFAC - 36249574 36249588 1.0E-06 CTTAAAAAAAAAGAA 15 V_STAF_01_M00262 TRANSFAC + 36249251 36249272 3.0E-06 AATTCCCAACATGCTCCACAGC 22 V_KROX_Q6_M00982 TRANSFAC + 36248675 36248688 8.0E-06 CGCGCCCCCCCCCC 14 V_CEBPD_Q6_M00621 TRANSFAC + 36249396 36249407 1.0E-06 AATTTCTTCATT 12 V_HSF1_01_M00146 TRANSFAC - 36247623 36247632 1.0E-06 AGAATGTTCG 10 V_RSRFC4_Q2_M00407 TRANSFAC + 36252098 36252114 5.0E-06 CTGGTAAATATAGTCCA 17 V_OLF1_01_M00261 TRANSFAC + 36249508 36249529 5.0E-06 TTCGTGTCCCCCAGGAATGTAT 22 V_AMEF2_Q6_M00403 TRANSFAC - 36248031 36248048 3.0E-06 GTTTCTAAATAAGGCTCT 18 V_AP1_Q4_M00188 TRANSFAC + 36252165 36252175 3.0E-06 AGTGACTCATT 11 V_SP1_Q6_M00196 TRANSFAC - 36246608 36246620 1.0E-06 GAGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC - 36247501 36247513 2.0E-06 GGGGGGCGGGGTG 13 V_SP1_Q6_M00196 TRANSFAC + 36249017 36249029 2.0E-06 GAGGGGCGGGGCT 13 V_IRF_Q6_M00772 TRANSFAC + 36249568 36249582 2.0E-06 CTTTCTTTCTTTTTT 15 V_NKX52_01_M01315 TRANSFAC - 36248067 36248083 5.0E-06 GCAGGCGCTTAATAAAT 17 V_RFXDC2_03_M02790 TRANSFAC - 36249035 36249049 2.0E-06 TCGCTTAGCAACGCC 15 V_USF_02_M00122 TRANSFAC + 36252067 36252080 3.0E-06 TAGTCACGTGGTCA 14 V_USF_02_M00122 TRANSFAC - 36252067 36252080 3.0E-06 TGACCACGTGACTA 14 V_ELF5_01_M01197 TRANSFAC + 36246078 36246088 7.0E-06 AGAAGGAAGTA 11 V_JUNDM2_04_M02876 TRANSFAC - 36252163 36252178 5.0E-06 AGGAATGAGTCACTGT 16 V_AHR_01_M00139 TRANSFAC - 36246522 36246539 5.0E-06 CTGCCGCCTGGCGTGGAT 18 V_ZBRK1_01_M01105 TRANSFAC - 36248247 36248261 8.0E-06 GGGAGGCAGTGGATT 15 V_ERBETA_Q5_M01875 TRANSFAC + 36247454 36247468 6.0E-06 CTTAGAGTGACCCAG 15 V_TEF_01_M01305 TRANSFAC - 36249517 36249528 1.0E-06 TACATTCCTGGG 12 V_TEF_01_M01305 TRANSFAC + 36252146 36252157 8.0E-06 TACATTCCTGGC 12 V_TCF7_03_M02817 TRANSFAC - 36249436 36249452 3.0E-06 GAAAGTTCAAAGACAAC 17 V_KLF7_03_M02773 TRANSFAC - 36249016 36249031 1.0E-06 TCAGCCCCGCCCCTCT 16 V_SRF_Q5_02_M01007 TRANSFAC + 36248030 36248048 4.0E-06 GAGAGCCTTATTTAGAAAC 19 V_STAF_02_M00264 TRANSFAC + 36249251 36249271 4.0E-06 AATTCCCAACATGCTCCACAG 21 V_SP1_01_M00008 TRANSFAC - 36247502 36247511 3.0E-06 GGGGCGGGGT 10 V_NR1B1_Q6_M02110 TRANSFAC - 36249442 36249451 2.0E-06 AAAGTTCAAA 10 V_SRF_03_M01304 TRANSFAC - 36248034 36248046 7.0E-06 TTCTAAATAAGGC 13 V_SRF_03_M01304 TRANSFAC + 36249373 36249385 5.0E-06 GTCCAAGAAAGGC 13 V_MAF_Q6_01_M00983 TRANSFAC - 36248432 36248442 6.0E-06 GGCTGAGTCAG 11 V_SP4_Q5_M01273 TRANSFAC + 36246609 36246619 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC - 36249018 36249028 8.0E-06 GCCCCGCCCCT 11 V_ELF1_Q6_M00746 TRANSFAC + 36248137 36248148 5.0E-06 AGAAGAGGAAAC 12 V_USF_Q6_01_M00796 TRANSFAC - 36252068 36252079 0.0E+00 GACCACGTGACT 12 V_LRH1_Q5_M01142 TRANSFAC - 36247035 36247046 1.0E-05 CTGACCTTGCAG 12 V_MINI19_B_M00323 TRANSFAC + 36246843 36246863 4.0E-06 TCCAGGACCCACCCAGGGAGA 21 V_ZIC2_05_M02940 TRANSFAC - 36246924 36246938 9.0E-06 ACTCCCAGTAGGAGA 15 V_MTF1_06_M02882 TRANSFAC - 36249569 36249582 3.0E-06 AAAAAAGAAAGAAA 14 V_NFYC_Q5_M02107 TRANSFAC - 36248624 36248637 7.0E-06 GGGCCAATCAGTCC 14 V_SMAD4_04_M02898 TRANSFAC - 36249015 36249031 3.0E-06 TCAGCCCCGCCCCTCTC 17 V_CNOT3_01_M01253 TRANSFAC - 36246403 36246412 8.0E-06 GGCCGCGCCC 10 V_AP1FJ_Q2_M00172 TRANSFAC + 36252165 36252175 3.0E-06 AGTGACTCATT 11 V_MAX_01_M00119 TRANSFAC + 36252067 36252080 9.0E-06 TAGTCACGTGGTCA 14 V_MAX_01_M00119 TRANSFAC - 36252067 36252080 9.0E-06 TGACCACGTGACTA 14 V_HEN1_02_M00058 TRANSFAC - 36249117 36249138 6.0E-06 ATCGGCCTCACCTGCGGTCCAT 22 V_FOXJ3_06_M02855 TRANSFAC + 36248044 36248060 5.0E-06 GAAACCCAAACAATGAC 17 V_PLAG1_01_M01778 TRANSFAC - 36247118 36247133 8.0E-06 GGGGCTCTGAGGAGGG 16 V_MYOGNF1_01_M00056 TRANSFAC + 36248895 36248923 9.0E-06 AACACGCCCTGTCGGGCAGGCAGTCGTCC 29 V_NCX_01_M00484 TRANSFAC - 36248860 36248869 1.0E-05 CAGTAATTGG 10 V_TEF1_Q6_03_M01817 TRANSFAC + 36249519 36249527 9.0E-06 CAGGAATGT 9 V_TEF1_Q6_03_M01817 TRANSFAC - 36252147 36252155 9.0E-06 CAGGAATGT 9 V_TCF7_04_M02921 TRANSFAC - 36249578 36249592 3.0E-06 CTGTCTTAAAAAAAA 15 V_MSX1_01_M00394 TRANSFAC - 36248861 36248869 7.0E-06 CAGTAATTG 9 V_P53_05_M01655 TRANSFAC + 36247624 36247643 7.0E-06 GAACATTCTCTCACATGTTC 20 V_PITX2_Q2_M00482 TRANSFAC + 36252178 36252188 1.0E-06 TGTAATCCCAG 11 V_RSRFC4_01_M00026 TRANSFAC - 36252098 36252113 7.0E-06 GGACTATATTTACCAG 16 V_IRF1_Q6_01_M01881 TRANSFAC + 36249570 36249583 6.0E-06 TTCTTTCTTTTTTT 14 V_ZFP281_04_M02831 TRANSFAC + 36248677 36248691 6.0E-06 CGCCCCCCCCCCAAC 15 V_SRF_06_M02916 TRANSFAC - 36249572 36249588 3.0E-06 CTTAAAAAAAAAGAAAG 17 V_SRF_06_M02916 TRANSFAC - 36249573 36249589 0.0E+00 TCTTAAAAAAAAAGAAA 17 V_SRF_06_M02916 TRANSFAC - 36249574 36249590 1.0E-06 GTCTTAAAAAAAAAGAA 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 36246587 36246604 5.0E-06 GGAGGGGAGGGAGGCTTG 18 V_ZIC1_04_M02835 TRANSFAC - 36248490 36248503 8.0E-06 GGCCCCCGGGGGGC 14 V_PR_02_M00957 TRANSFAC - 36247357 36247383 1.0E-05 CCTGAGGGGAAGGAATGTTCTTAGTCT 27 V_RFX3_04_M02788 TRANSFAC - 36249031 36249053 3.0E-06 TCCGTCGCTTAGCAACGCCCTAT 23 V_SP1_Q2_01_M00933 TRANSFAC + 36246610 36246619 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC + 36247503 36247512 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC - 36249018 36249027 7.0E-06 CCCCGCCCCT 10 V_UF1H3BETA_Q6_M01068 TRANSFAC - 36248678 36248691 3.0E-06 GTTGGGGGGGGGGC 14 V_ELF5_04_M02241 TRANSFAC - 36246080 36246088 4.0E-06 TACTTCCTT 9 V_HMX3_02_M01413 TRANSFAC - 36248067 36248083 6.0E-06 GCAGGCGCTTAATAAAT 17 V_SP1_Q4_01_M00932 TRANSFAC - 36246608 36246620 2.0E-06 GAGGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC - 36247501 36247513 5.0E-06 GGGGGGCGGGGTG 13 V_SP1_Q4_01_M00932 TRANSFAC + 36249017 36249029 3.0E-06 GAGGGGCGGGGCT 13 V_TCF3_05_M02920 TRANSFAC - 36249577 36249591 8.0E-06 TGTCTTAAAAAAAAA 15 V_BRCA_01_M01082 TRANSFAC - 36248709 36248716 1.0E-05 TTCTGTTG 8 V_CEBPG_Q6_01_M01869 TRANSFAC - 36249404 36249415 8.0E-06 CATTTCAAAATG 12 V_MIF1_01_M00279 TRANSFAC - 36249035 36249052 1.0E-05 CCGTCGCTTAGCAACGCC 18 V_SMAD1_01_M01590 TRANSFAC - 36249570 36249581 2.0E-06 AAAAAGAAAGAA 12 PPARG_RXRA_MA0065.2 JASPAR - 36247000 36247014 8.0E-06 GCGGGGGAGAGGGCA 15 V_AP2_Q3_M00800 TRANSFAC + 36246532 36246547 8.0E-06 GGCGGCAGGCGGTAGC 16 V_NANOG_02_M01247 TRANSFAC - 36249562 36249581 1.0E-06 AAAAAGAAAGAAAGAAAGAA 20 V_NANOG_02_M01247 TRANSFAC - 36249566 36249585 0.0E+00 AAAAAAAAAGAAAGAAAGAA 20 V_NANOG_02_M01247 TRANSFAC - 36249570 36249589 8.0E-06 TCTTAAAAAAAAAGAAAGAA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.