Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SLC27A4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 10999 solute carrier family 27 (fatty acid transporter), member 4 chr9 + 131097838 - 131103338 131102838 Transcription Factor Binding Sites   Download all TFBS in the SLC27A4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints ZNF232_C2H2_full_monomeric_19_1 SELEX + 131102062 131102080 4.0E-06 ATGACAAATATAGGTTAAC 19 IRF7_IRF_DBD_trimeric_17_1 SELEX - 131102261 131102277 9.0E-06 AGAACGAAAATCATAAG 17 Klf4_MA0039.2 JASPAR + 131102704 131102713 5.0E-06 TGGGTGGGGC 10 TCF4_bHLH_full_dimeric_10_1 SELEX - 131102155 131102164 5.0E-06 CACACCTGTT 10 znf143_MA0088.1 JASPAR + 131102730 131102749 1.0E-06 CAACTCCCAGCGTGCCGCGC 20 ZNF524_C2H2_full_monomeric_14_1 SELEX + 131102369 131102382 9.0E-06 CTCGAACCCACAAC 14 HMBOX1_homeodomain_DBD_monomeric_10_1 SELEX - 131102118 131102127 1.0E-06 CTTAGTTAAC 10 SNAI2_C2H2_DBD_monomeric_9_1 SELEX + 131102155 131102163 3.0E-06 AACAGGTGT 9 V_HNF1_02_M01379 TRANSFAC - 131102069 131102085 4.0E-06 AATCAGTTAACCTATAT 17 V_HNF1_02_M01379 TRANSFAC + 131102070 131102086 2.0E-06 TATAGGTTAACTGATTT 17 V_HNF1_02_M01379 TRANSFAC - 131102112 131102128 2.0E-06 CCTTAGTTAACTTCACC 17 V_HNF1_02_M01379 TRANSFAC + 131102113 131102129 6.0E-06 GTGAAGTTAACTAAGGG 17 V_GATA3_03_M00351 TRANSFAC + 131102099 131102108 8.0E-06 AGAGATCATA 10 V_FOXJ2_02_M00423 TRANSFAC + 131101911 131101924 8.0E-06 CTATTAATGTTTAA 14 V_GKLF_02_M01588 TRANSFAC - 131102702 131102713 2.0E-06 GCCCCACCCAGC 12 V_BARBIE_01_M00238 TRANSFAC - 131102376 131102390 3.0E-06 ATTCAAAGGTTGTGG 15 V_RPC155_01_M01798 TRANSFAC - 131102366 131102381 1.0E-06 TTGTGGGTTCGAGTCC 16 V_PDEF_02_M02075 TRANSFAC - 131102597 131102606 4.0E-06 CCCGGATGTA 10 V_HIC1_06_M02867 TRANSFAC + 131101940 131101955 8.0E-06 GTGGATGCCCAACATG 16 V_DOBOX4_01_M01359 TRANSFAC - 131101901 131101917 1.0E-05 TTAATAGATCCCTGGGA 17 V_HIC1_05_M02763 TRANSFAC - 131102051 131102066 5.0E-06 GTCATGCCACCCTTAT 16 V_ZIC3_05_M02941 TRANSFAC + 131102886 131102900 4.0E-06 TGGCACAGCAGGTTT 15 V_PNR_01_M01650 TRANSFAC - 131102258 131102271 1.0E-06 AAAATCATAAGTCA 14 V_STAF_02_M00264 TRANSFAC + 131102731 131102751 2.0E-06 AACTCCCAGCGTGCCGCGCGG 21 V_ATF1_04_M02842 TRANSFAC + 131102042 131102055 6.0E-06 GCATGACAAATAAG 14 V_ATF1_04_M02842 TRANSFAC + 131102060 131102073 6.0E-06 GCATGACAAATATA 14 V_AML2_Q3_01_M01854 TRANSFAC - 131102570 131102580 2.0E-06 CCACACCACAG 11 V_MYF6_04_M02885 TRANSFAC + 131103881 131103895 0.0E+00 ACCAACAGACGCACT 15 V_IPF1_05_M01255 TRANSFAC - 131101911 131101922 2.0E-06 AAACATTAATAG 12 V_PDEF_01_M02040 TRANSFAC - 131102597 131102606 3.0E-06 CCCGGATGTA 10 V_TCF1_06_M02815 TRANSFAC - 131102069 131102085 1.0E-06 AATCAGTTAACCTATAT 17 V_TCF1_06_M02815 TRANSFAC + 131102070 131102086 2.0E-06 TATAGGTTAACTGATTT 17 V_TCF1_06_M02815 TRANSFAC - 131102112 131102128 6.0E-06 CCTTAGTTAACTTCACC 17 V_TCF1_06_M02815 TRANSFAC + 131102113 131102129 1.0E-06 GTGAAGTTAACTAAGGG 17 V_BDP1_01_M01796 TRANSFAC + 131102366 131102377 1.0E-06 GGACTCGAACCC 12 V_HNF1B_01_M01425 TRANSFAC + 131102114 131102130 9.0E-06 TGAAGTTAACTAAGGGC 17 V_TCF4_Q5_M00671 TRANSFAC + 131102382 131102389 1.0E-05 CCTTTGAA 8 V_HOXD8_01_M01432 TRANSFAC + 131101907 131101923 7.0E-06 GGATCTATTAATGTTTA 17 V_HOXD8_01_M01432 TRANSFAC - 131101908 131101924 3.0E-06 TTAAACATTAATAGATC 17 V_IPF1_04_M01236 TRANSFAC - 131101910 131101919 2.0E-06 CATTAATAGA 10 V_BRF1_01_M01747 TRANSFAC - 131102365 131102377 0.0E+00 GGGTTCGAGTCCC 13 V_SMAD_Q6_M00792 TRANSFAC + 131102179 131102187 3.0E-06 AGACACCAT 9

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.