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XYLB Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9942 xylulokinase homolog (H. influenzae) chr3 + 38383250 - 38388750 38388250 Transcription Factor Binding Sites   Download all TFBS in the XYLB promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 38391387 38391397 8.0E-06 CATGAGTCATA 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 38391387 38391397 4.0E-06 TATGACTCATG 11 NF-kappaB_MA0061.1 JASPAR - 38390550 38390559 6.0E-06 GGGACTTCCC 10 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 38391424 38391441 4.0E-06 GCAATTAAGTTAAAATGA 18 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX + 38391372 38391389 4.0E-06 ATCTTCTTATAAGGACAT 18 THRA_nuclearreceptor_FL_dimeric_18_1 SELEX - 38391372 38391389 7.0E-06 ATGTCCTTATAAGAAGAT 18 BARX1_homeodomain_DBD_dimeric_17_1 SELEX - 38391370 38391386 3.0E-06 TCCTTATAAGAAGATTA 17 POU3F3_POU_DBD_monomeric_12_1 SELEX + 38385802 38385813 7.0E-06 AAGAATAATTTG 12 POU3F2_POU_DBD_monomeric_13_1 SELEX + 38385801 38385813 5.0E-06 TAAGAATAATTTG 13 ISX_homeodomain_DBD_dimeric_13_1 SELEX + 38391429 38391441 1.0E-05 TTAACTTAATTGC 13 OTX2_homeodomain_DBD_dimeric_15_1 SELEX + 38391368 38391382 8.0E-06 CCTAATCTTCTTATA 15 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 38385533 38385548 4.0E-06 TTAAAGATCCTAAATG 16 NFKB2_NFAT_DBD_dimeric_13_1 SELEX - 38390548 38390560 9.0E-06 TGGGACTTCCCCT 13 TEAD1_TEA_full_monomeric_10_1 SELEX - 38390525 38390534 2.0E-06 CACATTCCTT 10 THRB_nuclearreceptor_DBD_dimeric_18_1 SELEX - 38391372 38391389 6.0E-06 ATGTCCTTATAAGAAGAT 18 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 38385533 38385548 3.0E-06 TTAAAGATCCTAAATG 16 POU6F2_POU_DBD_dimeric_16_1 SELEX + 38391415 38391430 3.0E-06 CTAATGACTTCATTTT 16 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 38389206 38389221 9.0E-06 CAGGGTAAAGTCCACT 16 RARA_nuclearreceptor_full_dimeric_17_1 SELEX + 38387520 38387536 9.0E-06 AGTGCATGAAAAGGGCA 17 Msx3_homeodomain_DBD_dimeric_18_1 SELEX - 38391424 38391441 5.0E-06 GCAATTAAGTTAAAATGA 18 PRRX1_homeodomain_full_dimeric_11_1 SELEX + 38391430 38391440 8.0E-06 TAACTTAATTG 11 CART1_homeodomain_DBD_dimeric_13_1 SELEX + 38391429 38391441 6.0E-06 TTAACTTAATTGC 13 Uncx_homeodomain_DBD_dimeric_13_1 SELEX + 38391429 38391441 9.0E-06 TTAACTTAATTGC 13 EN1_homeodomain_full_dimeric_14_1 SELEX + 38391416 38391429 8.0E-06 TAATGACTTCATTT 14 EN1_homeodomain_full_dimeric_14_1 SELEX + 38391435 38391448 6.0E-06 TAATTGCCTTTTTA 14 JDP2_bZIP_full_dimeric_9_1 SELEX + 38391388 38391396 4.0E-06 ATGAGTCAT 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 38391388 38391396 2.0E-06 ATGACTCAT 9 HNF4A_MA0114.1 JASPAR - 38389208 38389220 3.0E-06 AGGGTAAAGTCCA 13 PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX + 38391430 38391440 8.0E-06 TAACTTAATTG 11 GBX2_homeodomain_DBD_dimeric_14_1 SELEX + 38391435 38391448 7.0E-06 TAATTGCCTTTTTA 14 GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 38391435 38391448 8.0E-06 TAAAAAGGCAATTA 14 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 38390525 38390534 2.0E-06 CACATTCCTT 10 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 38391424 38391441 3.0E-06 GCAATTAAGTTAAAATGA 18 MSX1_homeodomain_DBD_dimeric_18_1 SELEX - 38391435 38391452 1.0E-05 CCTTTAAAAAGGCAATTA 18 RREB1_MA0073.1 JASPAR - 38385809 38385828 9.0E-06 CCTCCACCCACCCACCAAAT 20 V_HOXA9_01_M01351 TRANSFAC - 38391428 38391444 2.0E-06 AAGGCAATTAAGTTAAA 17 V_FOXP1_01_M00987 TRANSFAC - 38385512 38385531 9.0E-06 TTTGTTGTAATTTTGTCTTT 20 V_OSR1_03_M02784 TRANSFAC - 38388776 38388791 6.0E-06 CCTTACAGTAGCTGAC 16 RXR_RAR_DR5_MA0159.1 JASPAR + 38387520 38387536 7.0E-06 AGTGCATGAAAAGGGCA 17 V_NFKB_C_M00208 TRANSFAC - 38390549 38390560 6.0E-06 TGGGACTTCCCC 12 V_MSX3_01_M01341 TRANSFAC - 38391431 38391446 0.0E+00 AAAAGGCAATTAAGTT 16 V_DBX1_01_M01483 TRANSFAC - 38391424 38391440 1.0E-05 CAATTAAGTTAAAATGA 17 V_NFKB_Q6_01_M00774 TRANSFAC + 38390545 38390560 4.0E-06 GGGAGGGGAAGTCCCA 16 V_EBF_Q6_M00977 TRANSFAC - 38390566 38390576 1.0E-06 TTCCCTAGAGA 11 V_BACH2_01_M00490 TRANSFAC + 38391387 38391397 2.0E-06 CATGAGTCATA 11 V_SOX40_04_M02908 TRANSFAC - 38390515 38390530 5.0E-06 TTCCTTTATAATAAGC 16 V_BCL6_01_M01183 TRANSFAC + 38385797 38385812 0.0E+00 TTTTTAAGAATAATTT 16 V_COE1_Q6_M01871 TRANSFAC + 38390566 38390579 3.0E-06 TCTCTAGGGAAGTG 14 V_SATB1_Q3_M01723 TRANSFAC + 38385529 38385544 1.0E-06 AAATTTAAAGATCCTA 16 V_ISL2_01_M01328 TRANSFAC - 38391431 38391446 6.0E-06 AAAAGGCAATTAAGTT 16 V_HOXD1_01_M01448 TRANSFAC - 38391429 38391445 8.0E-06 AAAGGCAATTAAGTTAA 17 V_HOXD1_01_M01448 TRANSFAC + 38391430 38391446 2.0E-06 TAACTTAATTGCCTTTT 17 V_P50RELAP65_Q5_01_M01224 TRANSFAC - 38390547 38390558 9.0E-06 GGACTTCCCCTC 12 V_HNF4A_03_M02220 TRANSFAC - 38389208 38389220 3.0E-06 AGGGTAAAGTCCA 13 V_TGIF2_01_M01407 TRANSFAC + 38385500 38385515 5.0E-06 CATCTGCTGTCAAAAG 16 V_BACH1_01_M00495 TRANSFAC + 38391385 38391399 0.0E+00 GACATGAGTCATACT 15 V_SOX13_03_M02797 TRANSFAC + 38385800 38385815 3.0E-06 TTAAGAATAATTTGGT 16 V_HOXA6_01_M01392 TRANSFAC - 38391429 38391444 8.0E-06 AAGGCAATTAAGTTAA 16 V_HOXA6_01_M01392 TRANSFAC + 38391431 38391446 5.0E-06 AACTTAATTGCCTTTT 16 V_GATA3_05_M02859 TRANSFAC + 38385542 38385563 6.0E-06 CTAAATGGATTTTATCTGTGAT 22 V_SP4_03_M02810 TRANSFAC - 38388468 38388484 9.0E-06 CAGCCCGCCCCCTACCC 17 V_KROX_Q6_M00982 TRANSFAC - 38388468 38388481 3.0E-06 CCCGCCCCCTACCC 14 V_AP1_Q6_01_M00925 TRANSFAC - 38391388 38391396 4.0E-06 ATGACTCAT 9 V_HOXA3_07_M02869 TRANSFAC - 38385541 38385554 1.0E-06 AAAATCCATTTAGG 14 V_FOXK1_04_M02856 TRANSFAC + 38385518 38385532 3.0E-06 AAAATTACAACAAAT 15 V_CDX2_01_M01449 TRANSFAC - 38391430 38391445 8.0E-06 AAAGGCAATTAAGTTA 16 V_NKX25_02_M00241 TRANSFAC + 38391433 38391440 7.0E-06 CTTAATTG 8 V_SOX18_03_M02801 TRANSFAC - 38385520 38385535 9.0E-06 TAAATTTGTTGTAATT 16 V_TATA_C_M00216 TRANSFAC - 38391443 38391452 6.0E-06 CCTTTAAAAA 10 V_SFPI1_04_M02896 TRANSFAC + 38385529 38385542 7.0E-06 AAATTTAAAGATCC 14 V_HOX13_01_M00023 TRANSFAC - 38385794 38385823 3.0E-06 ACCCACCCACCAAATTATTCTTAAAAACTC 30 V_CDX1_01_M01373 TRANSFAC - 38391430 38391445 3.0E-06 AAAGGCAATTAAGTTA 16 V_IK2_01_M00087 TRANSFAC + 38385782 38385793 3.0E-06 ATTTGGGAATCA 12 V_SP1SP3_Q4_M01219 TRANSFAC + 38388447 38388457 5.0E-06 CCGCCTCCTCC 11 V_AP1_C_M00199 TRANSFAC + 38391388 38391396 8.0E-06 ATGAGTCAT 9 V_HNF4A_Q6_01_M02016 TRANSFAC - 38389205 38389219 8.0E-06 GGGTAAAGTCCACTT 15 V_SRF_Q5_02_M01007 TRANSFAC + 38391371 38391389 4.0E-06 AATCTTCTTATAAGGACAT 19 V_SRF_Q5_02_M01007 TRANSFAC - 38391372 38391390 7.0E-06 CATGTCCTTATAAGAAGAT 19 V_SP3_Q3_M00665 TRANSFAC + 38390539 38390552 1.0E-06 AGACTTGGGAGGGG 14 V_CTCF_02_M01259 TRANSFAC - 38385496 38385515 6.0E-06 CTTTTGACAGCAGATGTCAG 20 V_AP1_Q2_01_M00924 TRANSFAC + 38390533 38390544 8.0E-06 TGACTCAGACTT 12 V_NKX23_01_M01457 TRANSFAC + 38390507 38390522 8.0E-06 CTCCAAGTGCTTATTA 16 V_HNF4A_02_M02868 TRANSFAC - 38389204 38389219 2.0E-06 GGGTAAAGTCCACTTG 16 V_TFIII_Q6_M00706 TRANSFAC - 38388526 38388534 1.0E-05 AGAGGTAGG 9 V_AP1_Q4_01_M00926 TRANSFAC + 38391389 38391396 1.0E-05 TGAGTCAT 8 V_VJUN_01_M00036 TRANSFAC + 38391415 38391430 4.0E-06 CTAATGACTTCATTTT 16 V_BARHL1_01_M01332 TRANSFAC - 38391431 38391446 0.0E+00 AAAAGGCAATTAAGTT 16 V_FOXL1_02_M02857 TRANSFAC + 38385519 38385534 2.0E-06 AAATTACAACAAATTT 16 V_LUN1_01_M00480 TRANSFAC + 38385773 38385789 1.0E-06 TCCCAGAGCATTTGGGA 17 V_LUN1_01_M00480 TRANSFAC - 38385773 38385789 7.0E-06 TCCCAAATGCTCTGGGA 17 V_T3R_Q6_M00963 TRANSFAC - 38387981 38387989 7.0E-06 CCTGTCCTT 9 V_HNF4_Q6_01_M01031 TRANSFAC - 38389207 38389220 4.0E-06 AGGGTAAAGTCCAC 14 V_DMRT7_01_M01151 TRANSFAC - 38385517 38385530 1.0E-06 TTGTTGTAATTTTG 14 V_FRA1_Q5_M01267 TRANSFAC + 38391389 38391396 1.0E-05 TGAGTCAT 8 V_SRF_01_M00152 TRANSFAC - 38391372 38391389 1.0E-06 ATGTCCTTATAAGAAGAT 18 V_ZFP281_01_M01597 TRANSFAC + 38388465 38388475 9.0E-06 TGGGGGTAGGG 11 V_SRF_Q5_01_M00922 TRANSFAC - 38391371 38391385 1.0E-05 CCTTATAAGAAGATT 15 V_RXR_RAR_01_M02272 TRANSFAC + 38387520 38387536 7.0E-06 AGTGCATGAAAAGGGCA 17 V_NFKAPPAB_01_M00054 TRANSFAC - 38390550 38390559 7.0E-06 GGGACTTCCC 10 V_GATA2_03_M00349 TRANSFAC + 38390591 38390600 9.0E-06 AGAGATCAGA 10 V_VMAF_01_M00035 TRANSFAC - 38391303 38391321 1.0E-05 ATGTGAAGACACAGCAAGA 19 V_SATB1_01_M01232 TRANSFAC - 38385797 38385808 1.0E-05 TATTCTTAAAAA 12 V_YY1_01_M00059 TRANSFAC - 38385538 38385554 3.0E-06 AAAATCCATTTAGGATC 17 V_BSX_01_M01442 TRANSFAC - 38391429 38391444 9.0E-06 AAGGCAATTAAGTTAA 16 V_BARHL2_01_M01446 TRANSFAC - 38391431 38391446 0.0E+00 AAAAGGCAATTAAGTT 16 V_SOX12_03_M02796 TRANSFAC - 38385799 38385812 1.0E-05 AAATTATTCTTAAA 14 V_MEF2A_05_M01301 TRANSFAC + 38390515 38390526 8.0E-06 GCTTATTATAAA 12 V_LHX4_01_M01421 TRANSFAC + 38391430 38391446 6.0E-06 TAACTTAATTGCCTTTT 17 V_UF1H3BETA_Q6_M01068 TRANSFAC + 38388463 38388476 5.0E-06 GGTGGGGGTAGGGG 14 V_HOXA10_01_M01464 TRANSFAC - 38391429 38391444 3.0E-06 AAGGCAATTAAGTTAA 16 V_MAFK_04_M02880 TRANSFAC + 38385515 38385529 4.0E-06 GACAAAATTACAACA 15 V_HOXD10_01_M01375 TRANSFAC - 38391428 38391444 3.0E-06 AAGGCAATTAAGTTAAA 17 V_RNF96_01_M01199 TRANSFAC - 38388513 38388522 7.0E-06 GCCCGCGGCC 10 V_GLIS2_04_M02863 TRANSFAC - 38385797 38385810 1.0E-06 ATTATTCTTAAAAA 14 V_HOX13_02_M01452 TRANSFAC - 38391429 38391444 7.0E-06 AAGGCAATTAAGTTAA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.