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ZBED4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9889 zinc finger, BED-type containing 4 chr22 + 50242496 - 50247996 50247496 Transcription Factor Binding Sites   Download all TFBS in the ZBED4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints PITX3_homeodomain_DBD_monomeric_9_1 SELEX + 50246953 50246961 8.0E-06 GTTAATCCC 9 Foxa2_MA0047.2 JASPAR + 50248463 50248474 1.0E-05 TATTTATTTTGA 12 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 50247424 50247434 1.0E-05 GCCCCGCCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 50247440 50247450 1.0E-05 GCCCCGCCCCC 11 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 50248461 50248472 4.0E-06 AAAATAAATAAC 12 FOXL1_forkhead_full_dimeric_13_1 SELEX - 50248462 50248474 4.0E-06 TCAAAATAAATAA 13 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 50248462 50248472 3.0E-06 AAAATAAATAA 11 HOMEZ_HOMEZ_DBD_monomer-or-dimer_12_1 SELEX + 50246516 50246527 9.0E-06 AAAACGAGAAAA 12 Pax4_MA0068.1 JASPAR - 50248443 50248472 7.0E-06 AAAATAAATAACTTCCCTTTCGACCAACAC 30 PITX1_homeodomain_full_monomeric_8_1 SELEX + 50246954 50246961 1.0E-05 TTAATCCC 8 OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 50248804 50248818 0.0E+00 TATAATCCGTTTAAG 15 POU3F3_POU_DBD_monomeric_13_1 SELEX + 50246475 50246487 7.0E-06 TATATGCTAAAAT 13 SP1_MA0079.2 JASPAR + 50247425 50247434 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR + 50247441 50247450 7.0E-06 CCCCGCCCCC 10 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX - 50248037 50248050 4.0E-06 GAATGACACGTCCA 14 FOXI1_MA0042.1 JASPAR + 50248460 50248471 1.0E-06 AGTTATTTATTT 12 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 50246573 50246588 1.0E-06 TGTTCCAAAGTCCACG 16 RFX3_RFX_DBD_dimeric_15_1 SELEX + 50248307 50248321 9.0E-06 CGTTGCTAAGAGAAT 15 Otx1_homeodomain_DBD_dimeric_15_1 SELEX - 50248804 50248818 0.0E+00 TATAATCCGTTTAAG 15 SP4_C2H2_full_monomeric_17_1 SELEX + 50247421 50247437 2.0E-06 TAGGCCCCGCCCCCGAT 17 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 50248463 50248473 7.0E-06 CAAAATAAATA 11 RHOXF1_homeodomain_full_monomeric_8_1 SELEX + 50246954 50246961 1.0E-05 TTAATCCC 8 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 50248120 50248131 8.0E-06 CGCCCCGAGGCA 12 NRF1_NRF_full_dimeric_12_1 SELEX - 50247254 50247265 1.0E-05 TACGCAGGCGCA 12 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 50248462 50248472 7.0E-06 AAAATAAATAA 11 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 50248120 50248131 7.0E-06 CGCCCCGAGGCA 12 V_OBOX6_01_M01445 TRANSFAC + 50248805 50248819 0.0E+00 TTAAACGGATTATAT 15 V_AP2ALPHA_Q6_M01857 TRANSFAC + 50247444 50247454 6.0E-06 CGCCCCCGGCC 11 V_HNF3B_01_M00131 TRANSFAC + 50248458 50248472 8.0E-06 GAAGTTATTTATTTT 15 V_FREAC7_01_M00293 TRANSFAC - 50248459 50248474 2.0E-06 TCAAAATAAATAACTT 16 V_ZSCAN4_03_M02838 TRANSFAC - 50246825 50246841 0.0E+00 GAAATGTGCACTTTTAA 17 V_ZSCAN4_03_M02838 TRANSFAC + 50246826 50246842 3.0E-06 TAAAAGTGCACATTTCC 17 V_BCL6_Q3_01_M02085 TRANSFAC + 50248841 50248850 9.0E-06 TTTTCAAGAA 10 V_APOLYA_B_M00310 TRANSFAC - 50248452 50248466 5.0E-06 AATAACTTCCCTTTC 15 V_OBOX5_05_M03066 TRANSFAC + 50248806 50248822 3.0E-06 TAAACGGATTATATCTG 17 V_FOXA2_04_M02749 TRANSFAC - 50248458 50248474 9.0E-06 TCAAAATAAATAACTTC 17 V_OBOX1_01_M01450 TRANSFAC + 50248805 50248821 9.0E-06 TTAAACGGATTATATCT 17 V_MYB_03_M02883 TRANSFAC + 50247153 50247168 3.0E-06 CTGCCAACTGCCAAGC 16 V_GM397_03_M02760 TRANSFAC - 50246825 50246841 5.0E-06 GAAATGTGCACTTTTAA 17 V_GM397_03_M02760 TRANSFAC + 50246826 50246842 9.0E-06 TAAAAGTGCACATTTCC 17 V_SP1_Q6_01_M00931 TRANSFAC - 50247328 50247337 7.0E-06 GGGGCGGGGT 10 V_SP1_Q6_01_M00931 TRANSFAC - 50247424 50247433 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 50247440 50247449 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 50247456 50247465 4.0E-06 GGGGCGGGGC 10 V_OCT1_01_M00135 TRANSFAC + 50246472 50246490 2.0E-06 TCATATATGCTAAAATACT 19 V_FOXO3A_Q1_M01137 TRANSFAC - 50248459 50248470 3.0E-06 AATAAATAACTT 12 V_FOXO3A_Q1_M01137 TRANSFAC - 50248463 50248474 8.0E-06 TCAAAATAAATA 12 V_RFX4_03_M02789 TRANSFAC - 50248305 50248319 2.0E-06 TCTCTTAGCAACGAA 15 V_IRF3_05_M02767 TRANSFAC - 50248261 50248274 8.0E-06 AAGAAACAAAACTG 14 V_SP1_03_M02281 TRANSFAC + 50247425 50247434 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC + 50247441 50247450 7.0E-06 CCCCGCCCCC 10 V_GKLF_02_M01588 TRANSFAC + 50247194 50247205 5.0E-06 GCCCCGCCCAGC 12 V_SP1_02_M01303 TRANSFAC - 50247327 50247337 8.0E-06 GGGGCGGGGTC 11 V_PU1_Q4_M01172 TRANSFAC + 50248261 50248279 1.0E-06 CAGTTTTGTTTCTTCTTTT 19 V_TCFAP2E_04_M02926 TRANSFAC - 50248837 50248850 0.0E+00 TTCTTGAAAAAAAG 14 V_MYBL1_04_M02884 TRANSFAC + 50247153 50247167 4.0E-06 CTGCCAACTGCCAAG 15 V_NKX62_Q2_M00489 TRANSFAC - 50248461 50248472 4.0E-06 AAAATAAATAAC 12 V_NRSE_B_M00325 TRANSFAC + 50249248 50249268 5.0E-06 CTCAGATCCTTGGTGAGGAGC 21 V_ELF4_04_M02850 TRANSFAC - 50248460 50248476 8.0E-06 CTTCAAAATAAATAACT 17 V_SOX13_03_M02797 TRANSFAC - 50246483 50246498 6.0E-06 ATTAAAACAGTATTTT 16 V_GC_01_M00255 TRANSFAC - 50247422 50247435 5.0E-06 CGGGGGCGGGGCCT 14 V_GC_01_M00255 TRANSFAC - 50247438 50247451 8.0E-06 CGGGGGCGGGGCCG 14 V_OBOX5_02_M01480 TRANSFAC + 50248806 50248822 3.0E-06 TAAACGGATTATATCTG 17 V_TCF3_04_M02816 TRANSFAC - 50248464 50248480 2.0E-06 TTAACTTCAAAATAAAT 17 V_NKX61_01_M00424 TRANSFAC - 50246819 50246831 1.0E-06 CTTTTAATGTGTT 13 V_SP1_Q6_M00196 TRANSFAC + 50247283 50247295 9.0E-06 CGGGGGCGGAGCC 13 V_SP1_Q6_M00196 TRANSFAC - 50247423 50247435 1.0E-06 CGGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC - 50247439 50247451 1.0E-06 CGGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC - 50247455 50247467 5.0E-06 GCGGGGCGGGGCT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 50248463 50248473 2.0E-06 TATTTATTTTG 11 V_RFXDC2_03_M02790 TRANSFAC - 50248305 50248319 1.0E-06 TCTCTTAGCAACGAA 15 V_XBP1_02_M01770 TRANSFAC - 50248039 50248049 0.0E+00 AATGACACGTC 11 V_OCT1_04_M00138 TRANSFAC - 50246461 50246483 1.0E-06 TAGCATATATGAAAAGTATATGA 23 V_OCT1_04_M00138 TRANSFAC + 50246470 50246492 3.0E-06 TTTCATATATGCTAAAATACTGT 23 V_TCF7_03_M02817 TRANSFAC - 50248464 50248480 1.0E-06 TTAACTTCAAAATAAAT 17 V_XFD2_01_M00268 TRANSFAC - 50248459 50248472 6.0E-06 AAAATAAATAACTT 14 V_NCX_02_M01420 TRANSFAC - 50248459 50248475 6.0E-06 TTCAAAATAAATAACTT 17 V_TCF1_07_M02919 TRANSFAC + 50248805 50248818 1.0E-06 TTAAACGGATTATA 14 V_ISGF3G_03_M02771 TRANSFAC - 50248260 50248274 1.0E-06 AAGAAACAAAACTGA 15 V_SP1_01_M00008 TRANSFAC - 50247328 50247337 3.0E-06 GGGGCGGGGT 10 V_TBP_06_M02814 TRANSFAC - 50248459 50248474 1.0E-06 TCAAAATAAATAACTT 16 V_HNF4A_02_M02868 TRANSFAC - 50246571 50246586 1.0E-06 TTCCAAAGTCCACGTC 16 V_NKX32_02_M01482 TRANSFAC + 50246504 50246520 6.0E-06 CCCAACCTCTTAAAAAC 17 V_HOXD9_Q2_M01834 TRANSFAC + 50246820 50246829 3.0E-06 ACACATTAAA 10 V_SP4_Q5_M01273 TRANSFAC + 50247424 50247434 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC + 50247440 50247450 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC + 50247456 50247466 2.0E-06 GCCCCGCCCCG 11 V_HFH8_01_M00294 TRANSFAC + 50248460 50248472 9.0E-06 AGTTATTTATTTT 13 V_MTF1_06_M02882 TRANSFAC - 50248265 50248278 2.0E-06 AAAGAAGAAACAAA 14 V_IPF1_05_M01255 TRANSFAC + 50246820 50246831 1.0E-06 ACACATTAAAAG 12 V_ZBTB3_03_M02825 TRANSFAC - 50248220 50248236 6.0E-06 AAAACCACTGCAGTCGA 17 V_FOXL1_02_M02857 TRANSFAC - 50248462 50248477 2.0E-06 ACTTCAAAATAAATAA 16 V_PLAG1_01_M01778 TRANSFAC + 50247475 50247490 6.0E-06 GGGGCCCTGGGAGGGG 16 V_ZFP206_01_M01742 TRANSFAC - 50247255 50247265 8.0E-06 TACGCAGGCGC 11 V_P53_05_M01655 TRANSFAC - 50248028 50248047 9.0E-06 TGACACGTCCAGAGAAGTCC 20 V_FOXA2_03_M02260 TRANSFAC + 50248463 50248474 1.0E-05 TATTTATTTTGA 12 V_PLZF_02_M01075 TRANSFAC + 50246470 50246498 1.0E-06 TTTCATATATGCTAAAATACTGTTTTAAT 29 V_R_01_M00273 TRANSFAC - 50247039 50247059 7.0E-06 GAGGCCGCTCAGTGCGGTGCG 21 V_HFH3_01_M00289 TRANSFAC + 50248460 50248472 1.0E-06 AGTTATTTATTTT 13 V_FOXJ2_01_M00422 TRANSFAC - 50248458 50248475 1.0E-06 TTCAAAATAAATAACTTC 18 V_ZIC3_04_M02837 TRANSFAC - 50246961 50246975 9.0E-06 CCCCCCCGGGGGACG 15 V_ZIC3_04_M02837 TRANSFAC + 50246962 50246976 1.0E-06 GTCCCCCGGGGGGGC 15 V_ZIC1_04_M02835 TRANSFAC + 50246962 50246975 0.0E+00 GTCCCCCGGGGGGG 14 V_ZIC1_04_M02835 TRANSFAC + 50246963 50246976 8.0E-06 TCCCCCGGGGGGGC 14 V_HNF1A_Q5_M02013 TRANSFAC + 50248460 50248470 3.0E-06 AGTTATTTATT 11 V_HNF3B_Q6_M02014 TRANSFAC + 50248462 50248470 1.0E-05 TTATTTATT 9 V_SP1_Q2_01_M00933 TRANSFAC + 50247425 50247434 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC + 50247441 50247450 4.0E-06 CCCCGCCCCC 10 V_SP1_Q4_01_M00932 TRANSFAC - 50247423 50247435 1.0E-06 CGGGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC - 50247439 50247451 1.0E-06 CGGGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC - 50247455 50247467 9.0E-06 GCGGGGCGGGGCT 13 V_OBOX5_01_M01381 TRANSFAC + 50248806 50248822 3.0E-06 TAAACGGATTATATCTG 17 V_OBOX6_02_M03068 TRANSFAC + 50248805 50248819 0.0E+00 TTAAACGGATTATAT 15 V_ZIC2_04_M02836 TRANSFAC - 50246961 50246975 7.0E-06 CCCCCCCGGGGGACG 15 V_ZIC2_04_M02836 TRANSFAC + 50246962 50246976 1.0E-06 GTCCCCCGGGGGGGC 15 V_ZIC2_04_M02836 TRANSFAC + 50246963 50246977 1.0E-05 TCCCCCGGGGGGGCC 15 V_BRCA_01_M01082 TRANSFAC + 50248427 50248434 1.0E-05 TTCTGTTG 8 V_OBOX6_06_M03067 TRANSFAC - 50248806 50248822 3.0E-06 CAGATATAATCCGTTTA 17 V_PAX2_02_M00486 TRANSFAC - 50246780 50246788 2.0E-06 AATAAACTC 9 V_NANOG_02_M01247 TRANSFAC - 50248270 50248289 9.0E-06 ACAACGGGACAAAAGAAGAA 20 V_OTX3_01_M01403 TRANSFAC + 50248805 50248821 1.0E-06 TTAAACGGATTATATCT 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.