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URB1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
9875 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) chr21 -33764812 - 33770312 33765312

Transcription Factor Binding Sites

 
Download all TFBS in the URB1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
SP8_C2H2_DBD_monomeric_12_1 SELEX - 33765423 33765434 5.0E-06 GCCACGCCCCTT 12
Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 33766082 33766091 9.0E-06 GTCATTAAAA 10
SP3_C2H2_DBD_monomeric_11_1 SELEX - 33765424 33765434 1.0E-05 GCCACGCCCCT 11
Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 33766082 33766091 5.0E-06 GTCATTAAAA 10
HOXA10_homeodomain_DBD_monomeric_12_1 SELEX + 33766081 33766092 4.0E-06 TGTCATTAAAAT 12
NFIA_NFI_full_dimeric_15_1 SELEX + 33765838 33765852 0.0E+00 TTGGCTAGGTGCCAG 15
NFIA_NFI_full_dimeric_15_1 SELEX - 33765838 33765852 3.0E-06 CTGGCACCTAGCCAA 15
KLF16_C2H2_DBD_monomeric_11_1 SELEX - 33765424 33765434 7.0E-06 GCCACGCCCCT 11
Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 33762028 33762040 6.0E-06 ACTAATGGTTAAA 13
Arx_homeodomain_DBD_dimeric_13_1 SELEX - 33761707 33761719 1.0E-05 CAAATCTGATTAT 13
KLF14_C2H2_DBD_monomeric_14_1 SELEX - 33765422 33765435 1.0E-06 GGCCACGCCCCTTC 14
NFIX_NFI_full_dimeric_15_2 SELEX + 33765838 33765852 3.0E-06 TTGGCTAGGTGCCAG 15
NFIX_NFI_full_dimeric_15_2 SELEX - 33765838 33765852 0.0E+00 CTGGCACCTAGCCAA 15
Alx1_homeodomain_DBD_dimeric_13_1 SELEX - 33761707 33761719 8.0E-06 CAAATCTGATTAT 13
KLF13_C2H2_full_monomeric_18_1 SELEX - 33765419 33765436 2.0E-06 AGGCCACGCCCCTTCCGC 18
MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 33761841 33761854 1.0E-06 TTCATCATCATTCT 14
MEOX2_homeodomain_DBD_dimeric_14_1 SELEX + 33761962 33761975 9.0E-06 CTAATCAGAATTAC 14
Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX + 33766082 33766091 2.0E-06 GTCATTAAAA 10
GRHL1_CP2_DBD_dimer-of-dimers_17_1 SELEX - 33765910 33765926 2.0E-06 GACCAGTCGATCTGGTT 17
ALX3_homeodomain_full_dimeric_13_1 SELEX - 33761707 33761719 6.0E-06 CAAATCTGATTAT 13
SP1_MA0079.2 JASPAR + 33765560 33765569 7.0E-06 CCCCGCCCCC 10
NFIX_NFI_full_monomeric_9_2 SELEX + 33765791 33765799 8.0E-06 TTTGCCAAT 9
PHOX2B_homeodomain_full_dimeric_11_1 SELEX - 33761708 33761718 8.0E-06 AAATCTGATTA 11
Alx4_homeodomain_DBD_dimeric_13_1 SELEX - 33761707 33761719 9.0E-06 CAAATCTGATTAT 13
Otx1_homeodomain_DBD_dimeric_15_1 SELEX + 33761706 33761720 9.0E-06 CATAATCAGATTTGG 15
SP4_C2H2_full_monomeric_17_1 SELEX - 33765421 33765437 0.0E+00 CAGGCCACGCCCCTTCC 17
SP4_C2H2_full_monomeric_17_1 SELEX - 33765439 33765455 5.0E-06 ATCGCCCCGCCCCTTCT 17
ATF4_bZIP_DBD_dimeric_13_1 SELEX + 33766143 33766155 1.0E-06 AAATGATGCAATG 13
Atf4_bZIP_DBD_dimeric_14_1 SELEX + 33766142 33766155 1.0E-06 AAAATGATGCAATG 14
HOXC11_homeodomain_DBD_monomeric_11_1 SELEX + 33766081 33766091 5.0E-06 TGTCATTAAAA 11
TEAD3_TEA_DBD_dimeric_17_1 SELEX + 33761874 33761890 8.0E-06 AGATTCCAGAAATTCTC 17
PRRX1_homeodomain_full_dimeric_11_1 SELEX - 33761708 33761718 1.0E-05 AAATCTGATTA 11
CART1_homeodomain_DBD_dimeric_13_1 SELEX - 33761707 33761719 1.0E-05 CAAATCTGATTAT 13
Klf12_C2H2_DBD_monomeric_15_1 SELEX - 33765421 33765435 4.0E-06 GGCCACGCCCCTTCC 15
Hoxa11_homeodomain_DBD_monomeric_12_1 SELEX + 33766081 33766092 6.0E-06 TGTCATTAAAAT 12
MTF1_C2H2_DBD_monomeric_14_1 SELEX + 33761743 33761756 8.0E-06 GCTGCACACAGCAC 14
NFIB_NFI_full_dimeric_15_1 SELEX + 33765838 33765852 0.0E+00 TTGGCTAGGTGCCAG 15
NFIB_NFI_full_dimeric_15_1 SELEX - 33765838 33765852 4.0E-06 CTGGCACCTAGCCAA 15
TEAD1_TEA_full_dimeric_17_1 SELEX + 33761874 33761890 4.0E-06 AGATTCCAGAAATTCTC 17
HOXC10_homeodomain_DBD_monomeric_10_3 SELEX + 33766082 33766091 4.0E-06 GTCATTAAAA 10
PHOX2A_homeodomain_DBD_dimeric_11_1 SELEX - 33761708 33761718 9.0E-06 AAATCTGATTA 11
Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 33762017 33762031 3.0E-06 GAGATCAAGAGTTTA 15
TBX1_TBX_DBD_dimeric_20_1 SELEX + 33761686 33761705 1.0E-06 GGGTGTCATGAGAGGAGTGA 20
HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 33766081 33766091 9.0E-06 TGTCATTAAAA 11
V_HOXA9_01_M01351 TRANSFAC + 33766079 33766095 5.0E-06 CCTGTCATTAAAATGGA 17
V_MEIS1_02_M01419 TRANSFAC + 33766074 33766089 7.0E-06 AAGTTCCTGTCATTAA 16
V_ZFP410_04_M02936 TRANSFAC - 33765438 33765454 9.0E-06 TCGCCCCGCCCCTTCTG 17
V_DMRT3_01_M01148 TRANSFAC + 33765781 33765795 7.0E-06 GATTCGATACTTTGC 15
V_NF1_Q6_01_M00806 TRANSFAC - 33765836 33765852 1.0E-05 CTGGCACCTAGCCAAGG 17
V_NF1A_Q6_M02103 TRANSFAC - 33765837 33765852 6.0E-06 CTGGCACCTAGCCAAG 16
V_NF1A_Q6_M02103 TRANSFAC + 33765838 33765853 0.0E+00 TTGGCTAGGTGCCAGG 16
V_MTF1_Q4_M00650 TRANSFAC + 33761743 33761756 5.0E-06 GCTGCACACAGCAC 14
V_SP1_Q6_01_M00931 TRANSFAC + 33765443 33765452 4.0E-06 GGGGCGGGGC 10
V_OCT1_Q5_01_M00930 TRANSFAC - 33761636 33761646 9.0E-06 TCATTTCCATT 11
V_CEBP_C_M00201 TRANSFAC + 33766142 33766159 2.0E-06 AAAATGATGCAATGTATG 18
V_HNF4ALPHA_Q6_M00638 TRANSFAC + 33765106 33765118 9.0E-06 CTGAGCCTTGAAC 13
V_CEBP_Q2_M00190 TRANSFAC - 33766143 33766156 1.0E-06 ACATTGCATCATTT 14
V_SP1_03_M02281 TRANSFAC + 33765560 33765569 7.0E-06 CCCCGCCCCC 10
V_SP1_02_M01303 TRANSFAC - 33765558 33765568 3.0E-06 GGGGCGGGGGG 11
V_CEBPB_01_M00109 TRANSFAC + 33766143 33766156 1.0E-06 AAATGATGCAATGT 14
V_ZNF219_01_M01122 TRANSFAC + 33765556 33765567 5.0E-06 CACCCCCCGCCC 12
V_GC_01_M00255 TRANSFAC + 33765323 33765336 0.0E+00 AAGAGGCGGGGCTG 14
V_GC_01_M00255 TRANSFAC + 33765341 33765354 0.0E+00 AAGAGGCGGGGCTG 14
V_GC_01_M00255 TRANSFAC + 33765423 33765436 3.0E-06 AAGGGGCGTGGCCT 14
V_GC_01_M00255 TRANSFAC + 33765441 33765454 5.0E-06 AAGGGGCGGGGCGA 14
V_MEIS2_01_M01488 TRANSFAC + 33766074 33766089 5.0E-06 AAGTTCCTGTCATTAA 16
V_IPF1_Q4_M00436 TRANSFAC - 33766081 33766092 1.0E-06 ATTTTAATGACA 12
V_TGIF_02_M01346 TRANSFAC - 33766074 33766090 9.0E-06 TTTAATGACAGGAACTT 17
V_OCT1_03_M00137 TRANSFAC + 33761704 33761716 1.0E-05 GACATAATCAGAT 13
V_CART1_01_M00416 TRANSFAC + 33761960 33761977 0.0E+00 AGCTAATCAGAATTACCA 18
V_NKX31_02_M02782 TRANSFAC + 33761970 33761986 4.0E-06 AATTACCACTTATGCAG 17
V_POLY_C_M00212 TRANSFAC + 33766033 33766050 9.0E-06 CTGTAAAACCCCTTCCTG 18
V_CEBPD_Q6_M00621 TRANSFAC - 33761628 33761639 4.0E-06 CATTGCTTCATC 12
V_CEBPD_Q6_M00621 TRANSFAC - 33766144 33766155 1.0E-06 CATTGCATCATT 12
V_SP1_Q6_M00196 TRANSFAC + 33765441 33765453 1.0E-06 AAGGGGCGGGGCG 13
V_ZF5_B_M00333 TRANSFAC + 33765141 33765153 7.0E-06 TGCGGGCGCGCTT 13
V_YY1_Q6_02_M01035 TRANSFAC - 33766088 33766098 2.0E-06 GTCTCCATTTT 11
V_TGIF1_01_M03111 TRANSFAC - 33766074 33766090 9.0E-06 TTTAATGACAGGAACTT 17
V_NKX32_02_M01482 TRANSFAC + 33761970 33761986 2.0E-06 AATTACCACTTATGCAG 17
V_SP4_Q5_M01273 TRANSFAC - 33765442 33765452 8.0E-06 GCCCCGCCCCT 11
V_SP4_Q5_M01273 TRANSFAC + 33765559 33765569 5.0E-06 CCCCCGCCCCC 11
V_LRH1_Q5_M01142 TRANSFAC + 33765107 33765118 1.0E-05 TGAGCCTTGAAC 12
V_MRG2_01_M01395 TRANSFAC + 33766074 33766089 2.0E-06 AAGTTCCTGTCATTAA 16
V_IPF1_05_M01255 TRANSFAC + 33766081 33766092 3.0E-06 TGTCATTAAAAT 12
V_OSR2_04_M02889 TRANSFAC - 33764617 33764632 7.0E-06 ACAAGCTACTAGAAGC 16
V_EOMES_04_M02851 TRANSFAC + 33765741 33765756 5.0E-06 CTGAAGGTGTCGCATG 16
V_MEIS1_01_M00419 TRANSFAC - 33766077 33766088 9.0E-06 TAATGACAGGAA 12
V_SIX4_01_M01374 TRANSFAC - 33761682 33761698 5.0E-06 TCTCATGACACCCTTCA 17
V_OSR1_04_M02888 TRANSFAC - 33764617 33764632 3.0E-06 ACAAGCTACTAGAAGC 16
V_DMRT2_01_M01147 TRANSFAC + 33766141 33766156 6.0E-06 GAAAATGATGCAATGT 16
V_IPF1_Q4_01_M01013 TRANSFAC + 33766079 33766093 4.0E-06 CCTGTCATTAAAATG 15
V_CTF1_01_M01196 TRANSFAC + 33765839 33765852 8.0E-06 TGGCTAGGTGCCAG 14
V_SP1_Q2_01_M00933 TRANSFAC - 33765442 33765451 7.0E-06 CCCCGCCCCT 10
V_SP1_Q2_01_M00933 TRANSFAC + 33765560 33765569 4.0E-06 CCCCGCCCCC 10
V_CEBP_Q2_01_M00912 TRANSFAC - 33766143 33766154 3.0E-06 ATTGCATCATTT 12
V_SP1_Q4_01_M00932 TRANSFAC + 33765441 33765453 1.0E-06 AAGGGGCGGGGCG 13
TLX1_NFIC_MA0119.1 JASPAR + 33765839 33765852 8.0E-06 TGGCTAGGTGCCAG 14
V_NF1_Q6_M00193 TRANSFAC + 33765836 33765853 1.0E-05 CCTTGGCTAGGTGCCAGG 18
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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