Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9757 lysine (K)-specific methyltransferase 2B chr19 + 36203920 - 36209420 36208920 Transcription Factor Binding Sites   Download all TFBS in the promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 36207787 36207805 2.0E-06 CGTCCAGGAGAGGGCACTC 19 CTCF_MA0139.1 JASPAR - 36207996 36208014 5.0E-06 GGGCCACCAGGGGCCGCTA 19 ALX3_homeodomain_full_monomeric_10_1 SELEX + 36207684 36207693 2.0E-06 TCCAATTAAA 10 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 36208834 36208844 1.0E-05 GCCCCGCCCCC 11 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX - 36208523 36208533 1.0E-05 AGCCCCAGGCT 11 SOX8_HMG_full_dimeric_17_1 SELEX + 36204013 36204029 7.0E-06 AGTAAATGGCAGAGATG 17 Alx1_homeodomain_DBD_monomeric_10_1 SELEX + 36207684 36207693 5.0E-06 TCCAATTAAA 10 SOX9_HMG_DBD_monomeric_9_1 SELEX + 36208510 36208518 9.0E-06 GAACAATGG 9 SOX8_HMG_DBD_dimeric_14_1 SELEX + 36209592 36209605 6.0E-06 TGCATGTCCAGCCA 14 TFAP2A_TFAP_DBD_dimeric_11_1 SELEX - 36208523 36208533 9.0E-06 AGCCCCAGGCT 11 MSX1_homeodomain_full_monomeric_8_1 SELEX + 36207685 36207692 7.0E-06 CCAATTAA 8 MSX2_homeodomain_DBD_monomeric_8_1 SELEX + 36207685 36207692 7.0E-06 CCAATTAA 8 EGR2_C2H2_full_monomeric_15_1 SELEX + 36207973 36207987 9.0E-06 CCCCGCCCACGCCCC 15 SP1_MA0079.2 JASPAR + 36208835 36208844 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR + 36208852 36208861 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 36208881 36208890 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 36209005 36209014 7.0E-06 CCCCGCCCCC 10 ELK1_ETS_full_dimeric_17_1 SELEX - 36208614 36208630 6.0E-06 TTCTTCCGCCGGCAGCC 17 ELK1_ETS_full_dimeric_17_1 SELEX + 36209431 36209447 7.0E-06 AGCTTCCGGGGGAAAGG 17 SP4_C2H2_full_monomeric_17_1 SELEX - 36204270 36204286 6.0E-06 CTAGCCCCGCCCCTGAC 17 MIXL1_homeodomain_full_monomeric_10_1 SELEX + 36207684 36207693 1.0E-05 TCCAATTAAA 10 YY2_C2H2_full_monomeric_11_1 SELEX - 36208918 36208928 4.0E-06 GCCGCCATCTT 11 BSX_homeodomain_DBD_monomeric_8_1 SELEX + 36207685 36207692 7.0E-06 CCAATTAA 8 GSX2_homeodomain_DBD_monomeric_10_1 SELEX + 36207684 36207693 4.0E-06 TCCAATTAAA 10 POU1F1_POU_DBD_monomeric_17_1 SELEX + 36203946 36203962 2.0E-06 ATTATGCCTATTTCATG 17 Msx3_homeodomain_DBD_monomeric_8_1 SELEX + 36207685 36207692 7.0E-06 CCAATTAA 8 TFAP2C_TFAP_full_dimeric_11_1 SELEX - 36208523 36208533 8.0E-06 AGCCCCAGGCT 11 Pou5f1_MA0142.1 JASPAR - 36207904 36207918 2.0E-06 CTTTATTATGGTGAT 15 LBX2_homeodomain_DBD_monomeric_10_1 SELEX + 36207684 36207693 6.0E-06 TCCAATTAAA 10 SOX9_MA0077.1 JASPAR + 36208510 36208518 5.0E-06 GAACAATGG 9 NFE2L2_MA0150.1 JASPAR + 36207436 36207446 4.0E-06 ATGACCAAGCA 11 Tcfap2a_TFAP_DBD_dimeric_11_1 SELEX - 36208523 36208533 6.0E-06 AGCCCCAGGCT 11 V_MINI20_B_M00324 TRANSFAC + 36207507 36207527 6.0E-06 CCTGGCCTCCATGCAGGCGCA 21 V_STAT3_01_M00225 TRANSFAC - 36208645 36208665 6.0E-06 GGGGGCCTCCGGGAAATGTAG 21 V_GEN_INI_B_M00315 TRANSFAC - 36203929 36203936 1.0E-05 CCTCATTT 8 V_TCF3_01_M01594 TRANSFAC - 36204028 36204040 7.0E-06 CCTTTGAGTTTCA 13 V_ALX4_01_M00619 TRANSFAC - 36204048 36204060 4.0E-06 CCTTGGAATAATC 13 V_YY1_02_M00069 TRANSFAC - 36208911 36208930 1.0E-06 CCGCCGCCATCTTGGCACCG 20 V_DEAF1_01_M01001 TRANSFAC - 36208271 36208295 5.0E-06 CGGGGTCCGTGTGCTCCCGGAGAGG 25 V_GM397_03_M02760 TRANSFAC - 36207959 36207975 6.0E-06 GGGGTGTGCACAGACTA 17 V_POU5F1_02_M02245 TRANSFAC - 36207904 36207918 2.0E-06 CTTTATTATGGTGAT 15 V_SP1_Q6_01_M00931 TRANSFAC + 36204274 36204283 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 36208829 36208838 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC - 36208834 36208843 4.0E-06 GGGGCGGGGC 10 V_CREB_Q4_01_M00917 TRANSFAC - 36205169 36205179 7.0E-06 CTCTGACGTAA 11 V_YY1_Q6_M00793 TRANSFAC - 36208917 36208925 7.0E-06 GCCATCTTG 9 V_EAR2_Q2_M01728 TRANSFAC - 36209814 36209827 8.0E-06 TGAGCTCTGACCTG 14 V_GABPA_04_M02858 TRANSFAC + 36204385 36204400 4.0E-06 CCTTCTTCCCATCACA 16 V_SP1_03_M02281 TRANSFAC + 36208835 36208844 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC + 36208852 36208861 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 36208881 36208890 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 36209005 36209014 7.0E-06 CCCCGCCCCC 10 V_CREB_01_M00039 TRANSFAC - 36205169 36205176 1.0E-05 TGACGTAA 8 V_SP1_02_M01303 TRANSFAC + 36209006 36209016 8.0E-06 GGGGCGGGGGC 11 V_GM497_04_M02864 TRANSFAC + 36210586 36210601 5.0E-06 GGAAACACACAAGCAA 16 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 36204266 36204280 1.0E-06 TGAGGTCAGGGGCGG 15 V_WT1_Q6_01_M02036 TRANSFAC - 36209002 36209011 4.0E-06 CGCCCCCGCC 10 V_GC_01_M00255 TRANSFAC + 36204272 36204285 8.0E-06 CAGGGGCGGGGCTA 14 V_GC_01_M00255 TRANSFAC + 36208514 36208527 9.0E-06 AATGGGAGGAGCCT 14 V_GEN_INI3_B_M00314 TRANSFAC - 36203929 36203936 1.0E-05 CCTCATTT 8 V_PR_Q2_M00960 TRANSFAC + 36206005 36206014 7.0E-06 GAGAGAACAG 10 V_HOXB13_01_M01467 TRANSFAC + 36207682 36207697 8.0E-06 AGTCCAATTAAAGAAC 16 V_HNF4_01_B_M00411 TRANSFAC - 36207398 36207412 2.0E-06 GAGGACAAAGGCTAC 15 V_GATA3_05_M02859 TRANSFAC - 36207892 36207913 2.0E-06 TTATGGTGATGAGATCGACAAT 22 V_SOX8_04_M02912 TRANSFAC - 36203954 36203967 0.0E+00 TCATTCATGAAATA 14 V_NKX61_01_M00424 TRANSFAC - 36207683 36207695 5.0E-06 TCTTTAATTGGAC 13 V_KROX_Q6_M00982 TRANSFAC + 36207974 36207987 0.0E+00 CCCGCCCACGCCCC 14 V_KROX_Q6_M00982 TRANSFAC - 36209000 36209013 6.0E-06 CCCGCCCCCGCCGG 14 V_GMEB1_03_M02761 TRANSFAC + 36205165 36205181 2.0E-06 TCTTTTACGTCAGAGAC 17 V_SP1_Q6_M00196 TRANSFAC + 36204272 36204284 4.0E-06 CAGGGGCGGGGCT 13 V_SP1_Q6_M00196 TRANSFAC - 36208828 36208840 7.0E-06 GCGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC - 36208833 36208845 2.0E-06 CGGGGGCGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC - 36208879 36208891 7.0E-06 GGGGGGAGGGGCG 13 V_SP1_Q6_M00196 TRANSFAC + 36209004 36209016 9.0E-06 CGGGGGCGGGGGC 13 V_MAZ_Q6_01_M02023 TRANSFAC - 36208848 36208861 2.0E-06 GGGGGAGGGGAGAG 14 V_AP2BETA_Q3_M01858 TRANSFAC - 36208857 36208872 1.0E-06 GCGCAGGGCCGGGGGG 16 V_EGR1_Q6_M01873 TRANSFAC - 36207975 36207984 7.0E-06 GCGTGGGCGG 10 V_EGR1_Q6_M01873 TRANSFAC - 36208837 36208846 4.0E-06 GCGGGGGCGG 10 V_EGR1_Q6_M01873 TRANSFAC + 36209003 36209012 4.0E-06 GCGGGGGCGG 10 V_YY1_Q6_02_M01035 TRANSFAC - 36208918 36208928 7.0E-06 GCCGCCATCTT 11 V_REX1_03_M01744 TRANSFAC + 36208918 36208929 1.0E-06 AAGATGGCGGCG 12 V_BBX_04_M02843 TRANSFAC + 36207871 36207887 1.0E-06 CGAAGGTTAACAGTAGG 17 V_STAF_02_M00264 TRANSFAC + 36208748 36208768 8.0E-06 CTCTCCCGTGGTGCCCTGCGC 21 V_LMO2COM_01_M00277 TRANSFAC - 36207442 36207453 7.0E-06 CCGCAGGTGCTT 12 V_CTCF_02_M01259 TRANSFAC - 36207789 36207808 2.0E-06 GATCGTCCAGGAGAGGGCAC 20 V_EGR2_01_M00246 TRANSFAC - 36207975 36207986 1.0E-05 GGGCGTGGGCGG 12 V_CTCF_01_M01200 TRANSFAC - 36207787 36207806 1.0E-06 TCGTCCAGGAGAGGGCACTC 20 V_CTCF_01_M01200 TRANSFAC - 36207996 36208015 1.0E-06 AGGGCCACCAGGGGCCGCTA 20 V_SOX9_B1_M00410 TRANSFAC + 36208507 36208520 0.0E+00 CAAGAACAATGGGA 14 V_HNF4A_02_M02868 TRANSFAC + 36207676 36207691 1.0E-06 GCCAAGAGTCCAATTA 16 V_HNF4A_02_M02868 TRANSFAC + 36210555 36210570 5.0E-06 GTTCAGAGTCCAAGCT 16 V_SOX17_04_M02904 TRANSFAC - 36203955 36203971 0.0E+00 AACCTCATTCATGAAAT 17 V_SP4_Q5_M01273 TRANSFAC - 36204273 36204283 8.0E-06 GCCCCGCCCCT 11 V_SP4_Q5_M01273 TRANSFAC + 36208829 36208839 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC + 36208834 36208844 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC + 36208880 36208890 5.0E-06 GCCCCTCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 36209005 36209015 5.0E-06 CCCCCGCCCCC 11 V_YY1_03_M02044 TRANSFAC - 36208917 36208928 1.0E-06 GCCGCCATCTTG 12 V_MINI19_B_M00323 TRANSFAC + 36207507 36207527 4.0E-06 CCTGGCCTCCATGCAGGCGCA 21 V_MYOD_01_M00001 TRANSFAC - 36207645 36207656 7.0E-06 CGTCAGGTGGTG 12 V_ATF1_Q6_M00691 TRANSFAC - 36205169 36205179 4.0E-06 CTCTGACGTAA 11 V_AP1FJ_Q2_M00172 TRANSFAC + 36204001 36204011 3.0E-06 GGTGACTCAAA 11 V_FOXJ3_06_M02855 TRANSFAC + 36207904 36207920 6.0E-06 ATCACCATAATAAAGAG 17 V_GEN_INI2_B_M00313 TRANSFAC - 36203929 36203936 1.0E-05 CCTCATTT 8 V_PXR_Q2_M00964 TRANSFAC + 36204195 36204206 5.0E-06 AGGGTTAGAAAA 12 V_ATF2_Q5_M01862 TRANSFAC - 36205168 36205179 8.0E-06 CTCTGACGTAAA 12 V_T3RBETA_Q6_01_M02119 TRANSFAC + 36204258 36204274 6.0E-06 GAGGCCTGTGAGGTCAG 17 V_T3RBETA_Q6_01_M02119 TRANSFAC - 36207405 36207421 9.0E-06 GGGAGCGCTGAGGACAA 17 V_SMAD_Q6_01_M00974 TRANSFAC + 36209633 36209643 4.0E-06 TTGGCAGACAG 11 V_ZFP281_01_M01597 TRANSFAC - 36208852 36208862 2.0E-06 GGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 36208881 36208891 2.0E-06 GGGGGGAGGGG 11 V_EGR1_06_M02744 TRANSFAC + 36208836 36208849 1.0E-06 CCCGCCCCCGCTCT 14 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 36204204 36204211 1.0E-05 TGTGGTTT 8 V_PLAGL1_03_M02786 TRANSFAC + 36204290 36204305 9.0E-06 CAGGGGGGGCCCCAGG 16 V_SP1_Q2_01_M00933 TRANSFAC - 36204273 36204282 7.0E-06 CCCCGCCCCT 10 V_SP1_Q2_01_M00933 TRANSFAC + 36208835 36208844 4.0E-06 CCCCGCCCCC 10 V_SP1_Q2_01_M00933 TRANSFAC - 36209005 36209014 4.0E-06 CCCCGCCCCC 10 V_NFE2L2_01_M02263 TRANSFAC + 36207436 36207446 4.0E-06 ATGACCAAGCA 11 V_SP1_Q4_01_M00932 TRANSFAC + 36204272 36204284 5.0E-06 CAGGGGCGGGGCT 13 V_SP1_Q4_01_M00932 TRANSFAC - 36208833 36208845 3.0E-06 CGGGGGCGGGGCG 13 V_SP1_Q4_01_M00932 TRANSFAC - 36208879 36208891 9.0E-06 GGGGGGAGGGGCG 13 V_SMAD1_01_M01590 TRANSFAC + 36208508 36208519 7.0E-06 AAGAACAATGGG 12 V_PPARA_01_M00242 TRANSFAC + 36206089 36206108 1.0E-06 ACAGACCAGGTCAAAGGAGA 20 V_EGR3_01_M00245 TRANSFAC - 36207975 36207986 9.0E-06 GGGCGTGGGCGG 12 V_TR4_03_M01782 TRANSFAC + 36209815 36209827 1.0E-06 AGGTCAGAGCTCA 13 V_OCT4_01_M01125 TRANSFAC - 36207904 36207918 7.0E-06 CTTTATTATGGTGAT 15 V_PPARG_01_M00512 TRANSFAC + 36206092 36206112 9.0E-06 GACCAGGTCAAAGGAGAAACG 21

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.