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CROCC Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9696 ciliary rootlet coiled-coil, rootletin chr1 + 17243444 - 17248944 17248444 Transcription Factor Binding Sites   Download all TFBS in the CROCC promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SP3_C2H2_DBD_monomeric_11_1 SELEX + 17252446 17252456 7.0E-06 GCCACACCCCC 11 ZNF306_C2H2_full_monomeric_14_1 SELEX - 17247835 17247848 3.0E-06 TGGTAGAGCCTCGA 14 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 17252446 17252456 4.0E-06 GCCACACCCCC 11 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 17247987 17247998 0.0E+00 TGTTTTCCCACA 12 EWSR1-FLI1_MA0149.1 JASPAR - 17248232 17248249 2.0E-06 GAAAAGGAGGGAGGAGAG 18 EWSR1-FLI1_MA0149.1 JASPAR - 17248301 17248318 2.0E-06 GAGAGGAGGGAAGCAGAG 18 NFIX_NFI_full_dimeric_15_2 SELEX + 17252436 17252450 8.0E-06 ATGGCACAGTGCCAC 15 NFIX_NFI_full_dimeric_15_2 SELEX - 17252436 17252450 7.0E-06 GTGGCACTGTGCCAT 15 NFKB1_MA0105.1 JASPAR + 17253155 17253165 8.0E-06 GGGGGTCCCCC 11 Tp73_p53l_DBD_dimeric_18_1 SELEX + 17252256 17252273 9.0E-06 GACTAGTTGGGACTTGTA 18 Tp73_p53l_DBD_dimeric_18_1 SELEX - 17252256 17252273 5.0E-06 TACAAGTCCCAACTAGTC 18 MAFF_bZIP_DBD_dimeric_15_1 SELEX + 17248447 17248461 9.0E-06 GTGCTGACTGAGCTA 15 LEF1_HMG_DBD_monomeric_15_1 SELEX - 17253343 17253357 4.0E-06 AGAGATGAAAGAAGT 15 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 17253270 17253285 7.0E-06 CGTGTCCATAGCAACC 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 17253270 17253285 4.0E-06 GGTTGCTATGGACACG 16 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 17253346 17253357 1.0E-05 AGAGATGAAAGA 12 SP1_C2H2_DBD_monomeric_11_1 SELEX + 17248116 17248126 7.0E-06 ACCCCACCCCC 11 SP1_C2H2_DBD_monomeric_11_1 SELEX + 17252446 17252456 8.0E-06 GCCACACCCCC 11 RFX2_RFX_DBD_dimeric_16_1 SELEX + 17253270 17253285 1.0E-05 CGTGTCCATAGCAACC 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 17253270 17253285 5.0E-06 GGTTGCTATGGACACG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 17253270 17253285 1.0E-06 CGTGTCCATAGCAACC 16 ZNF282_C2H2_DBD_monomeric_17_1 SELEX - 17247980 17247996 1.0E-06 TTTTCCCACAACAGGTG 17 POU3F2_POU_DBD_monomeric_12_1 SELEX + 17246157 17246168 9.0E-06 TGATGCTAATGA 12 TP63_p53l_DBD_dimeric_18_1 SELEX + 17252256 17252273 1.0E-06 GACTAGTTGGGACTTGTA 18 TP63_p53l_DBD_dimeric_18_1 SELEX - 17252256 17252273 2.0E-06 TACAAGTCCCAACTAGTC 18 V_MEQ_01_M02049 TRANSFAC - 17252187 17252195 7.0E-06 AACACACAC 9 V_TCF3_01_M01594 TRANSFAC + 17253380 17253392 6.0E-06 CTTTTGAATTGCA 13 V_TCF3_01_M01594 TRANSFAC - 17253395 17253407 4.0E-06 CCTTTCAATTTTA 13 V_ATF5_01_M01295 TRANSFAC + 17248280 17248290 2.0E-06 CCTCTTCCTTT 11 V_BTEB3_Q5_M01865 TRANSFAC - 17253228 17253240 5.0E-06 CCAAGGGAGGCGT 13 V_RHOX11_01_M01347 TRANSFAC + 17248006 17248022 5.0E-06 AGCATGCTGTAAATCCT 17 V_STAT3STAT3_Q3_M01220 TRANSFAC - 17248714 17248727 7.0E-06 TTGCCAGGAACTGC 14 V_IRF_Q6_01_M00972 TRANSFAC + 17253396 17253406 2.0E-06 AAAATTGAAAG 11 V_RFX4_03_M02789 TRANSFAC + 17253273 17253287 2.0E-06 GTCCATAGCAACCTG 15 V_RFX4_03_M02789 TRANSFAC - 17253320 17253334 7.0E-06 TCCCCTAGCAACTGC 15 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC - 17248119 17248134 4.0E-06 CAAGCCCAGGGGGTGG 16 V_RHOX11_02_M01384 TRANSFAC + 17248006 17248022 5.0E-06 AGCATGCTGTAAATCCT 17 V_IPF1_Q4_M00436 TRANSFAC + 17246159 17246170 8.0E-06 ATGCTAATGACA 12 V_MAZ_Q6_01_M02023 TRANSFAC - 17248329 17248342 9.0E-06 GAGGGAGGGGATGG 14 V_MAZ_Q6_01_M02023 TRANSFAC - 17248333 17248346 6.0E-06 TGAGGAGGGAGGGG 14 V_OCT1_05_M00161 TRANSFAC - 17253205 17253218 8.0E-06 CTCCTTTCCATTCC 14 V_RFXDC2_03_M02790 TRANSFAC + 17253273 17253287 6.0E-06 GTCCATAGCAACCTG 15 V_SRF_Q5_02_M01007 TRANSFAC + 17246108 17246126 2.0E-06 CCTGTCCTTTTTTAGGGCT 19 V_BLIMP1_Q6_M01066 TRANSFAC - 17248216 17248231 8.0E-06 AGAAGAGGGAATGGGA 16 V_BLIMP1_Q6_M01066 TRANSFAC - 17248321 17248336 4.0E-06 GGGGATGGGAAAGGAC 16 V_HBP1_04_M02866 TRANSFAC - 17246163 17246179 4.0E-06 TGTTCCTATTGTCATTA 17 V_TAL1_01_M01591 TRANSFAC + 17248240 17248252 1.0E-06 CCTCCTTTTCTCT 13 V_T3R_Q6_M00963 TRANSFAC + 17246108 17246116 7.0E-06 CCTGTCCTT 9 V_T3R_Q6_M00963 TRANSFAC + 17248318 17248326 7.0E-06 CCTGTCCTT 9 V_RHOX11_05_M03099 TRANSFAC + 17248006 17248022 5.0E-06 AGCATGCTGTAAATCCT 17 V_FPM315_01_M01587 TRANSFAC - 17248357 17248368 9.0E-06 GTGGGAGGAGCA 12 V_MECP2_02_M01299 TRANSFAC + 17248393 17248402 2.0E-06 CCGGATTTAA 10 V_P53_04_M01652 TRANSFAC - 17252151 17252170 1.0E-05 GCTCCAGCCTGGACAAGTCC 20 V_TBP_04_M02918 TRANSFAC + 17248394 17248408 7.0E-06 CGGATTTAAGCTTAA 15 V_ZFP281_01_M01597 TRANSFAC - 17248117 17248127 5.0E-06 AGGGGGTGGGG 11 V_P63_01_M01656 TRANSFAC + 17252255 17252274 7.0E-06 CGACTAGTTGGGACTTGTAG 20 V_SRF_02_M01257 TRANSFAC - 17246107 17246124 4.0E-06 CCCTAAAAAAGGACAGGA 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 17248232 17248249 2.0E-06 GAAAAGGAGGGAGGAGAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 17248301 17248318 2.0E-06 GAGAGGAGGGAAGCAGAG 18 V_IPF1_Q4_01_M01013 TRANSFAC - 17246158 17246172 8.0E-06 ATTGTCATTAGCATC 15 V_SOX1_03_M02802 TRANSFAC - 17253378 17253393 5.0E-06 TTGCAATTCAAAAGGG 16 V_IRF1_01_M00062 TRANSFAC + 17253395 17253407 5.0E-06 TAAAATTGAAAGG 13 V_RFX3_04_M02788 TRANSFAC + 17253269 17253291 4.0E-06 TCGTGTCCATAGCAACCTGGAAA 23 V_RFX3_04_M02788 TRANSFAC - 17253316 17253338 3.0E-06 TGTCTCCCCTAGCAACTGCTGCC 23 V_CTF1_01_M01196 TRANSFAC - 17252436 17252449 1.0E-06 TGGCACTGTGCCAT 14 V_SP1_Q4_01_M00932 TRANSFAC - 17248115 17248127 9.0E-06 AGGGGGTGGGGTC 13 V_ZID_01_M00085 TRANSFAC + 17248137 17248149 8.0E-06 GGGCTCTAGGACC 13 V_RHOX11_06_M03100 TRANSFAC + 17248006 17248022 5.0E-06 AGCATGCTGTAAATCCT 17 TLX1_NFIC_MA0119.1 JASPAR - 17252436 17252449 1.0E-06 TGGCACTGTGCCAT 14 V_OCT4_01_M01125 TRANSFAC + 17253381 17253395 6.0E-06 TTTTGAATTGCAAGT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.