Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SLC25A44 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9673 solute carrier family 25, member 44 chr1 + 156158729 - 156164229 156163729 Transcription Factor Binding Sites   Download all TFBS in the SLC25A44 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 156163846 156163864 7.0E-06 CCCCCTGCAGGGGGCGGTA 19 FLI1_ETS_full_monomeric_10_1 SELEX - 156163878 156163887 4.0E-06 ACCGGAAATT 10 ERG_ETS_full_monomeric_10_1 SELEX - 156163878 156163887 6.0E-06 ACCGGAAATT 10 LHX6_homeodomain_full_dimeric_16_1 SELEX - 156163637 156163652 1.0E-05 TAATTGGCGGAAATTG 16 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 156163636 156163653 2.0E-06 TCAATTTCCGCCAATTAG 18 PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 156163636 156163653 1.0E-05 CTAATTGGCGGAAATTGA 18 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 156161267 156161281 5.0E-06 CCATTAAGCTAAGTG 15 POU5F1P1_POU_DBD_monomeric_9_1 SELEX - 156163556 156163564 6.0E-06 TATTCAAAT 9 FEV_ETS_DBD_monomeric_10_1 SELEX - 156163878 156163887 6.0E-06 ACCGGAAATT 10 POU2F3_POU_DBD_monomeric_9_1 SELEX - 156163556 156163564 6.0E-06 TATTCAAAT 9 ETV1_ETS_DBD_monomeric_10_1 SELEX - 156163878 156163887 8.0E-06 ACCGGAAATT 10 POU1F1_POU_DBD_monomeric_14_1 SELEX - 156163553 156163566 3.0E-06 TATATTCAAATCAA 14 POU2F2_POU_DBD_monomeric_11_1 SELEX - 156163555 156163565 7.0E-06 ATATTCAAATC 11 Pou2f2_POU_DBD_monomeric_9_1 SELEX - 156163556 156163564 4.0E-06 TATTCAAAT 9 NR2F1_MA0017.1 JASPAR - 156161280 156161293 4.0E-06 TGAACCTTGAAACC 14 TCF7L1_HMG_full_monomeric_12_1 SELEX - 156162825 156162836 7.0E-06 AGAGATAAAAGA 12 BARHL2_homeodomain_full_dimeric_16_1 SELEX - 156163637 156163652 3.0E-06 TAATTGGCGGAAATTG 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX - 156163637 156163652 4.0E-06 TAATTGGCGGAAATTG 16 ETV2_ETS_DBD_monomeric_11_1 SELEX - 156163878 156163888 1.0E-06 AACCGGAAATT 11 POU3F3_POU_DBD_monomeric_13_1 SELEX - 156163554 156163566 8.0E-06 TATATTCAAATCA 13 Lhx8_homeodomain_DBD_dimeric_18_1 SELEX + 156163636 156163653 2.0E-06 TCAATTTCCGCCAATTAG 18 Lhx8_homeodomain_DBD_dimeric_18_1 SELEX - 156163636 156163653 3.0E-06 CTAATTGGCGGAAATTGA 18 ETS1_ETS_full_monomeric_10_1 SELEX - 156163878 156163887 5.0E-06 ACCGGAAATT 10 FOXI1_MA0042.1 JASPAR - 156162743 156162754 6.0E-06 TGATATTTATTG 12 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 156163470 156163485 3.0E-06 AAGTCCGAAGTTCGAG 16 ETV4_ETS_DBD_monomeric_10_1 SELEX - 156163878 156163887 7.0E-06 ACCGGAAATT 10 ELK4_ETS_DBD_monomeric_10_1 SELEX - 156163878 156163887 6.0E-06 ACCGGAAATT 10 znf143_MA0088.1 JASPAR + 156163505 156163524 9.0E-06 GGCGTCCCAGAATTCTGAGA 20 ELK4_MA0076.1 JASPAR - 156163879 156163887 7.0E-06 ACCGGAAAT 9 SP4_C2H2_full_monomeric_17_1 SELEX - 156163708 156163724 6.0E-06 GTAGCCACGCCTTCTTT 17 NFATC1_NFAT_full_dimeric_20_1 SELEX - 156163558 156163577 7.0E-06 GTTGGAACCTTTATATTCAA 20 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 156162825 156162836 9.0E-06 AGAGATAAAAGA 12 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX - 156163471 156163485 2.0E-06 AAGTCCGAAGTTCGA 15 HOXA13_homeodomain_full_monomeric_10_1 SELEX + 156162742 156162751 7.0E-06 CCAATAAATA 10 POU3F1_POU_DBD_monomeric_12_1 SELEX - 156163554 156163565 8.0E-06 ATATTCAAATCA 12 ELK1_MA0028.1 JASPAR - 156163880 156163889 1.0E-06 GAACCGGAAA 10 ERF_ETS_DBD_monomeric_10_1 SELEX - 156163878 156163887 7.0E-06 ACCGGAAATT 10 ELK1_ETS_full_monomeric_10_1 SELEX - 156163878 156163887 7.0E-06 ACCGGAAATT 10 Pou5f1_MA0142.1 JASPAR - 156163556 156163570 9.0E-06 CCTTTATATTCAAAT 15 POU2F1_POU_DBD_monomeric_12_1 SELEX - 156163555 156163566 6.0E-06 TATATTCAAATC 12 HOXC13_homeodomain_DBD_monomeric_10_1 SELEX + 156162742 156162751 8.0E-06 CCAATAAATA 10 Elk3_ETS_DBD_monomeric_10_1 SELEX - 156163878 156163887 7.0E-06 ACCGGAAATT 10 ETV6_ETS_full_dimeric_15_1 SELEX - 156163878 156163892 0.0E+00 CCGGAACCGGAAATT 15 POU3F2_POU_DBD_monomeric_12_1 SELEX - 156163554 156163565 8.0E-06 ATATTCAAATCA 12 HOXB13_homeodomain_DBD_monomeric_10_1 SELEX + 156162742 156162751 6.0E-06 CCAATAAATA 10 V_ERG_03_M02062 TRANSFAC - 156163878 156163887 6.0E-06 ACCGGAAATT 10 V_ERM_01_M01992 TRANSFAC - 156163878 156163887 5.0E-06 ACCGGAAATT 10 V_GATA2_02_M00348 TRANSFAC - 156162827 156162836 5.0E-06 AGAGATAAAA 10 V_ZFX_01_M01593 TRANSFAC - 156163970 156163985 5.0E-06 CTCTAGGCCGCAGCCC 16 V_NERF_01_M01976 TRANSFAC - 156163878 156163887 9.0E-06 ACCGGAAATT 10 V_POU5F1_02_M02245 TRANSFAC - 156163556 156163570 9.0E-06 CCTTTATATTCAAAT 15 V_SATB1_Q3_M01723 TRANSFAC - 156162842 156162857 8.0E-06 AGAAATAGAGACACAA 16 V_PROP1_01_M01294 TRANSFAC + 156163414 156163424 1.0E-05 TAATTTATTTC 11 V_ELF1_01_M01975 TRANSFAC - 156163878 156163887 8.0E-06 ACCGGAAATT 10 V_SP100_03_M02809 TRANSFAC - 156163638 156163651 2.0E-06 AATTGGCGGAAATT 14 V_POU2F3_01_M01476 TRANSFAC - 156163552 156163567 2.0E-06 TTATATTCAAATCAAG 16 V_YY1_Q6_M00793 TRANSFAC - 156163735 156163743 7.0E-06 GCCATCTTG 9 V_HOXD13_01_M01404 TRANSFAC + 156162739 156162754 5.0E-06 TATCCAATAAATATCA 16 V_CETS2_02_M02064 TRANSFAC - 156163878 156163887 4.0E-06 ACCGGAAATT 10 V_MEF2A_Q6_M02024 TRANSFAC + 156163426 156163435 4.0E-06 TATTTTTAGT 10 V_CETS1P54_02_M00074 TRANSFAC - 156163877 156163889 0.0E+00 GAACCGGAAATTA 13 V_HMGA2_01_M01300 TRANSFAC - 156163638 156163652 1.0E-06 TAATTGGCGGAAATT 15 V_PAX5_02_M00144 TRANSFAC - 156162473 156162500 8.0E-06 CAAGGCAGACTAGGAGCGTGACCACTGA 28 V_RPC155_01_M01798 TRANSFAC - 156163467 156163482 0.0E+00 TCCGAAGTTCGAGACC 16 V_ELK1_06_M02059 TRANSFAC - 156163878 156163887 5.0E-06 ACCGGAAATT 10 V_ELK1_05_M01981 TRANSFAC - 156163878 156163887 5.0E-06 ACCGGAAATT 10 V_HOXB13_01_M01467 TRANSFAC + 156162739 156162754 4.0E-06 TATCCAATAAATATCA 16 V_SAP1A_02_M01983 TRANSFAC - 156163878 156163887 6.0E-06 ACCGGAAATT 10 V_FLI1_02_M02073 TRANSFAC - 156163878 156163887 6.0E-06 ACCGGAAATT 10 V_PET1_02_M02072 TRANSFAC - 156163878 156163887 4.0E-06 ACCGGAAATT 10 V_MYCMAX_02_M00123 TRANSFAC - 156164320 156164331 1.0E-05 CACCACATGACA 12 V_COUP_01_M00158 TRANSFAC - 156161280 156161293 4.0E-06 TGAACCTTGAAACC 14 V_ERF_01_M01984 TRANSFAC - 156163878 156163887 9.0E-06 ACCGGAAATT 10 V_ERG_01_M01752 TRANSFAC - 156163879 156163887 7.0E-06 ACCGGAAAT 9 V_GABPA_01_M02039 TRANSFAC - 156163878 156163887 4.0E-06 ACCGGAAATT 10 V_CETS2_01_M01989 TRANSFAC - 156163878 156163887 9.0E-06 ACCGGAAATT 10 V_PET1_01_M02037 TRANSFAC - 156163878 156163887 5.0E-06 ACCGGAAATT 10 V_REX1_03_M01744 TRANSFAC + 156163736 156163747 4.0E-06 AAGATGGCTACC 12 V_SP1SP3_Q4_M01219 TRANSFAC + 156163843 156163853 8.0E-06 CCGCCCCCTGC 11 V_SP1SP3_Q4_M01219 TRANSFAC - 156163852 156163862 8.0E-06 CCGCCCCCTGC 11 V_SOX12_04_M02900 TRANSFAC - 156162831 156162846 5.0E-06 CACAAGACAAAGAGAT 16 V_ELK1_02_M00025 TRANSFAC - 156163877 156163890 9.0E-06 GGAACCGGAAATTA 14 V_ERF_02_M02061 TRANSFAC - 156163878 156163887 8.0E-06 ACCGGAAATT 10 V_CTCF_01_M01200 TRANSFAC + 156163845 156163864 4.0E-06 GCCCCCTGCAGGGGGCGGTA 20 V_ER71_01_M01988 TRANSFAC - 156163878 156163887 5.0E-06 ACCGGAAATT 10 V_NET_01_M01982 TRANSFAC - 156163878 156163887 6.0E-06 ACCGGAAATT 10 V_ER81_01_M01987 TRANSFAC - 156163878 156163887 8.0E-06 ACCGGAAATT 10 V_ERM_02_M02069 TRANSFAC - 156163878 156163887 5.0E-06 ACCGGAAATT 10 V_MTF1_06_M02882 TRANSFAC - 156163417 156163430 0.0E+00 AAATACGAAATAAA 14 V_ISX_01_M01331 TRANSFAC - 156163642 156163657 9.0E-06 CTTTCTAATTGGCGGA 16 V_EHF_06_M02745 TRANSFAC - 156163877 156163891 3.0E-06 CGGAACCGGAAATTA 15 V_FAC1_01_M00456 TRANSFAC - 156162836 156162849 9.0E-06 AGACACAAGACAAA 14 V_MYOD_Q6_01_M00929 TRANSFAC - 156162510 156162527 3.0E-06 CAGAGCCAGGTGTACAAG 18 V_OCT2_01_M01368 TRANSFAC - 156163552 156163567 2.0E-06 TTATATTCAAATCAAG 16 V_SP4_04_M02914 TRANSFAC + 156163710 156163724 9.0E-06 AGAAGGCGTGGCTAC 15 V_GATA3_02_M00350 TRANSFAC - 156162827 156162836 2.0E-06 AGAGATAAAA 10 V_E2F3_03_M02743 TRANSFAC - 156163392 156163406 6.0E-06 GTAATGGCGCGCGCC 15 V_BDP1_01_M01796 TRANSFAC + 156163467 156163478 9.0E-06 GGTCTCGAACTT 12 V_E2F2_03_M02742 TRANSFAC - 156163392 156163406 8.0E-06 GTAATGGCGCGCGCC 15 V_MECP2_02_M01299 TRANSFAC - 156163877 156163886 4.0E-06 CCGGAAATTA 10 V_SAP1A_03_M02058 TRANSFAC - 156163878 156163887 9.0E-06 ACCGGAAATT 10 V_TCFAP2A_03_M02819 TRANSFAC - 156162355 156162369 9.0E-06 ACTCCCCCGGGGAAA 15 V_CETS1_02_M02063 TRANSFAC - 156163878 156163887 5.0E-06 ACCGGAAATT 10 V_GATA2_03_M00349 TRANSFAC - 156162827 156162836 3.0E-06 AGAGATAAAA 10 V_FOXJ2_01_M00422 TRANSFAC + 156162739 156162756 9.0E-06 TATCCAATAAATATCAGC 18 V_IPF1_Q4_01_M01013 TRANSFAC - 156163858 156163872 8.0E-06 TCTGTCATTACCGCC 15 V_SOX2_Q6_M01272 TRANSFAC + 156162830 156162845 6.0E-06 TATCTCTTTGTCTTGT 16 V_ELF_02_M02053 TRANSFAC - 156163878 156163887 1.0E-05 ACCGGAAATT 10 V_MEF2A_05_M01301 TRANSFAC + 156163423 156163434 6.0E-06 TCGTATTTTTAG 12 V_HOXA10_01_M01464 TRANSFAC + 156162739 156162754 4.0E-06 TATCCAATAAATATCA 16 V_P300_01_M00033 TRANSFAC - 156162708 156162721 6.0E-06 ATAAGGAGTGTGAG 14 V_ARID5A_04_M02840 TRANSFAC - 156163418 156163434 0.0E+00 CTAAAAATACGAAATAA 17 V_ER71_02_M02067 TRANSFAC - 156163878 156163887 5.0E-06 ACCGGAAATT 10 V_NANOG_02_M01247 TRANSFAC - 156163270 156163289 0.0E+00 TCTCAAAAAGAAAAAAAAAA 20 V_ELF4_02_M02056 TRANSFAC - 156163878 156163887 7.0E-06 ACCGGAAATT 10 V_GATA1_06_M00347 TRANSFAC - 156162827 156162836 8.0E-06 AGAGATAAAA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.