Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TCL1B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9623 T-cell leukemia/lymphoma 1B chr14 + 96147753 - 96153253 96152753 Transcription Factor Binding Sites   Download all TFBS in the TCL1B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 96150341 96150359 5.0E-06 CCTCCAGCAGAGGGAGCCC 19 Tp53_p53l_DBD_dimeric_18_1 SELEX - 96153460 96153477 6.0E-06 CCATGTATGTGAGCATGT 18 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 96155767 96155778 6.0E-06 CTTAAAAATAGA 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 96155767 96155778 2.0E-06 CTTAAAAATAGA 12 MEOX2_homeodomain_DBD_dimeric_14_1 SELEX - 96153591 96153604 0.0E+00 GTCATTATCATTAT 14 MEF2A_MA0052.1 JASPAR - 96155768 96155777 3.0E-06 CTATTTTTAA 10 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 96152753 96152766 9.0E-06 CTGGAAAGCTACAC 14 znf143_MA0088.1 JASPAR + 96150232 96150251 1.0E-06 TCTTACCCAGCCTTCCAAGC 20 NR3C1_MA0113.1 JASPAR - 96155741 96155758 3.0E-06 GGAAAAAATACTTACTAA 18 FOXC1_MA0032.1 JASPAR + 96155743 96155750 7.0E-06 AGTAAGTA 8 V_SRF_Q6_M00186 TRANSFAC + 96152730 96152743 8.0E-06 CTCCATTTAAGGAG 14 V_ATF5_01_M01295 TRANSFAC + 96155760 96155770 8.0E-06 CTTCTTTCTTA 11 V_MAFK_03_M02776 TRANSFAC - 96155742 96155756 8.0E-06 AAAAAATACTTACTA 15 V_FOXA2_04_M02749 TRANSFAC + 96153656 96153672 7.0E-06 ATGAAGTAAATACAGTA 17 V_BCL6_01_M01183 TRANSFAC + 96155741 96155756 1.0E-06 TTAGTAAGTATTTTTT 16 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 96153568 96153579 3.0E-06 ACTTTTCAAAAG 12 V_MEF2_02_M00231 TRANSFAC + 96155761 96155782 1.0E-06 TTCTTTCTTAAAAATAGATCGA 22 V_NR3C1_01_M02219 TRANSFAC - 96155741 96155758 3.0E-06 GGAAAAAATACTTACTAA 18 V_TCFAP2E_04_M02926 TRANSFAC - 96155749 96155762 3.0E-06 AAGGGGAAAAAATA 14 V_MEF2A_Q6_M02024 TRANSFAC - 96155767 96155776 9.0E-06 TATTTTTAAG 10 V_CDP_04_M01344 TRANSFAC + 96153592 96153606 2.0E-06 TAATGATAATGACTC 15 V_SRF_C_M00215 TRANSFAC + 96152731 96152745 2.0E-06 TCCATTTAAGGAGAT 15 V_ELF4_04_M02850 TRANSFAC + 96155764 96155780 8.0E-06 TTTCTTAAAAATAGATC 17 V_OCT1_03_M00137 TRANSFAC + 96153588 96153600 2.0E-06 GTGATAATGATAA 13 Hand1_Tcfe2a_MA0092.1 JASPAR + 96150276 96150285 4.0E-06 GGTCTGGAAT 10 V_RSRFC4_Q2_M00407 TRANSFAC + 96155765 96155781 5.0E-06 TTCTTAAAAATAGATCG 17 V_AP1_Q6_01_M00925 TRANSFAC + 96153600 96153608 7.0E-06 ATGACTCAG 9 V_OCT1_05_M00161 TRANSFAC - 96153591 96153604 6.0E-06 GTCATTATCATTAT 14 V_HMX1_01_M00433 TRANSFAC + 96150294 96150303 5.0E-06 CAAGTGGGTG 10 V_MEF2_03_M00232 TRANSFAC + 96155761 96155782 2.0E-06 TTCTTTCTTAAAAATAGATCGA 22 V_CUX1_04_M02959 TRANSFAC + 96153592 96153606 2.0E-06 TAATGATAATGACTC 15 V_MEF2_04_M00233 TRANSFAC + 96155761 96155782 4.0E-06 TTCTTTCTTAAAAATAGATCGA 22 V_AP1_C_M00199 TRANSFAC + 96153600 96153608 6.0E-06 ATGACTCAG 9 V_MEF2_Q6_01_M00941 TRANSFAC - 96155768 96155779 1.0E-06 ATCTATTTTTAA 12 V_NKX3A_01_M00451 TRANSFAC + 96155742 96155753 4.0E-06 TAGTAAGTATTT 12 V_SRF_Q5_02_M01007 TRANSFAC + 96152727 96152745 5.0E-06 CTGCTCCATTTAAGGAGAT 19 V_STAF_02_M00264 TRANSFAC + 96150233 96150253 4.0E-06 CTTACCCAGCCTTCCAAGCCC 21 V_CTCF_02_M01259 TRANSFAC - 96150343 96150362 4.0E-06 CCTCCTCCAGCAGAGGGAGC 20 V_CTCF_01_M01200 TRANSFAC - 96150341 96150360 2.0E-06 TCCTCCAGCAGAGGGAGCCC 20 V_MAF_Q6_01_M00983 TRANSFAC - 96153600 96153610 1.0E-06 TCCTGAGTCAT 11 V_AP1_Q4_01_M00926 TRANSFAC - 96153600 96153607 1.0E-05 TGAGTCAT 8 V_CIZ_01_M00734 TRANSFAC - 96155749 96155757 3.0E-06 GAAAAAATA 9 V_HAND1E47_01_M00222 TRANSFAC + 96150271 96150286 4.0E-06 TTTGTGGTCTGGAATC 16 V_TCF7_04_M02921 TRANSFAC + 96155763 96155777 8.0E-06 CTTTCTTAAAAATAG 15 V_FRA1_Q5_M01267 TRANSFAC - 96153600 96153607 1.0E-05 TGAGTCAT 8 V_NRF2_Q4_M00821 TRANSFAC - 96153599 96153611 1.0E-06 TTCCTGAGTCATT 13 V_SRF_Q4_M00810 TRANSFAC + 96152731 96152748 2.0E-06 TCCATTTAAGGAGATTGC 18 V_VMAF_01_M00035 TRANSFAC + 96153595 96153613 8.0E-06 TGATAATGACTCAGGAAAC 19 V_NMYC_01_M00055 TRANSFAC - 96152761 96152772 3.0E-06 TCACACGTGTAG 12 V_IPF1_Q4_01_M01013 TRANSFAC - 96153593 96153607 8.0E-06 TGAGTCATTATCATT 15 V_PIT1_Q6_M00802 TRANSFAC + 96155759 96155776 2.0E-06 CCTTCTTTCTTAAAAATA 18 V_TCF3_05_M02920 TRANSFAC - 96155747 96155761 3.0E-06 AGGGGAAAAAATACT 15 V_GLIS2_04_M02863 TRANSFAC - 96155762 96155775 7.0E-06 ATTTTTAAGAAAGA 14

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.