Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

NCOR1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9611 nuclear receptor corepressor 1 chr17 - 16118374 - 16123874 16118874 Transcription Factor Binding Sites   Download all TFBS in the NCOR1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 16117045 16117062 9.0E-06 TAGGTAAACATCTACTCT 18 POU4F2_POU_full_monomeric_16_1 SELEX - 16115856 16115871 8.0E-06 TTGCATATTTAGTTCC 16 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 16117047 16117059 4.0E-06 GTAAACATCTACT 13 FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 16118101 16118113 9.0E-06 GAAAACACCAACA 13 SOX21_HMG_DBD_dimeric_15_1 SELEX + 16115082 16115096 5.0E-06 AACAGTATAAGTGTT 15 Foxa2_MA0047.2 JASPAR + 16117053 16117064 9.0E-06 TGTTTACCTAAT 12 SOX4_HMG_DBD_dimeric_16_1 SELEX + 16115081 16115096 7.0E-06 GAACAGTATAAGTGTT 16 POU2F1_POU_DBD_dimeric_14_1 SELEX + 16115859 16115872 4.0E-06 ACTAAATATGCAAG 14 RARB_nuclearreceptor_full_dimeric_16_1 SELEX + 16119597 16119612 5.0E-06 TAAGGTCAGGAGTTCG 16 ZNF713_C2H2_full_monomeric_17_1 SELEX + 16115099 16115115 5.0E-06 AGGAAAAATGCCACCAC 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 16115118 16115134 9.0E-06 GAAAACCAAAATAAAAA 17 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 16119160 16119171 4.0E-06 CCTTTTCCCACG 12 FOXD1_MA0031.1 JASPAR - 16117052 16117059 7.0E-06 GTAAACAT 8 TFAP2B_TFAP_DBD_dimeric_11_1 SELEX + 16120736 16120746 1.0E-05 CGCCTAAGGCA 11 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 16117052 16117062 3.0E-06 TAGGTAAACAT 11 SOX8_HMG_full_dimeric_15_1 SELEX - 16115082 16115096 3.0E-06 AACACTTATACTGTT 15 ISL2_homeodomain_DBD_monomeric_8_1 SELEX - 16119447 16119454 1.0E-05 GCACTTAA 8 ISL2_homeodomain_DBD_monomeric_8_1 SELEX - 16120824 16120831 1.0E-05 GCACTTAA 8 Sox17_HMG_DBD_dimeric_15_1 SELEX + 16115082 16115096 0.0E+00 AACAGTATAAGTGTT 15 Sox17_HMG_DBD_dimeric_15_1 SELEX - 16115082 16115096 2.0E-06 AACACTTATACTGTT 15 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX - 16120824 16120832 7.0E-06 AGCACTTAA 9 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 16115198 16115213 6.0E-06 TAAAAAGTGCTAATAG 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 16115198 16115213 5.0E-06 TAAAAAGTGCTAATAG 16 Foxc1_forkhead_DBD_dimeric_11_1 SELEX + 16116870 16116880 8.0E-06 GTACATAAATA 11 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 16115859 16115872 6.0E-06 ACTAAATATGCAAG 14 POU2F3_POU_DBD_dimeric_12_1 SELEX + 16115860 16115871 3.0E-06 CTAAATATGCAA 12 FOXI1_MA0042.1 JASPAR - 16115858 16115869 5.0E-06 GCATATTTAGTT 12 SOX18_HMG_full_dimeric_15_1 SELEX + 16115082 16115096 1.0E-06 AACAGTATAAGTGTT 15 SOX18_HMG_full_dimeric_15_1 SELEX - 16115082 16115096 5.0E-06 AACACTTATACTGTT 15 YY2_C2H2_full_monomeric_11_1 SELEX + 16118833 16118843 4.0E-06 GCCGCCATCTT 11 SOX7_HMG_full_dimeric_17_1 SELEX + 16115081 16115097 2.0E-06 GAACAGTATAAGTGTTC 17 SOX7_HMG_full_dimeric_17_1 SELEX - 16115081 16115097 3.0E-06 GAACACTTATACTGTTC 17 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 16119598 16119613 7.0E-06 AAGGTCAGGAGTTCGA 16 POU1F1_POU_DBD_monomeric_17_1 SELEX - 16115858 16115874 0.0E+00 CTCTTGCATATTTAGTT 17 NKX2-3_homeodomain_full_monomeric_10_1 SELEX - 16120823 16120832 4.0E-06 AGCACTTAAA 10 Nkx3-2_MA0122.1 JASPAR + 16119447 16119455 1.0E-05 TTAAGTGCA 9 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 16115860 16115871 3.0E-06 CTAAATATGCAA 12 Rhox11_homeodomain_DBD_monomeric_9_1 SELEX - 16120441 16120449 7.0E-06 CGCTGTTAA 9 Sox11_HMG_DBD_dimeric_15_1 SELEX - 16115082 16115096 9.0E-06 AACACTTATACTGTT 15 HMX2_homeodomain_DBD_monomeric_11_1 SELEX - 16120822 16120832 6.0E-06 AGCACTTAAAT 11 CPEB1_RRM_full_monomeric_8_1 SELEX + 16115127 16115134 4.0E-06 AATAAAAA 8 IRF3_IRF_full_trimeric_21_1 SELEX + 16120238 16120258 2.0E-06 TAAGAAATGAATTCGAAAATG 21 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX + 16119598 16119612 2.0E-06 AAGGTCAGGAGTTCG 15 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 16120898 16120912 9.0E-06 GGGGTTCAGAGGTAA 15 Sox3_HMG_DBD_dimeric_17_1 SELEX + 16115081 16115097 5.0E-06 GAACAGTATAAGTGTTC 17 FOXL1_MA0033.1 JASPAR + 16120292 16120299 9.0E-06 TATATATA 8 FOXL1_MA0033.1 JASPAR - 16120292 16120299 9.0E-06 TATATATA 8 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 16118101 16118113 4.0E-06 GAAAACACCAACA 13 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 16117052 16117062 7.0E-06 TAGGTAAACAT 11 SOX9_HMG_full_dimeric_17_1 SELEX + 16115081 16115097 8.0E-06 GAACAGTATAAGTGTTC 17 SOX9_HMG_full_dimeric_17_1 SELEX - 16115081 16115097 3.0E-06 GAACACTTATACTGTTC 17 HMX1_homeodomain_DBD_monomeric_11_1 SELEX - 16120822 16120832 5.0E-06 AGCACTTAAAT 11 Zfx_MA0146.1 JASPAR - 16119575 16119588 5.0E-06 CCCGCCTCGGCCTC 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 16115124 16115137 4.0E-06 CAAAATAAAAAACA 14 V_FOXP1_01_M00987 TRANSFAC - 16115102 16115121 2.0E-06 TTTCTTGTGGTGGCATTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 16115112 16115131 1.0E-06 TTATTTTGGTTTTCTTGTGG 20 V_FOXP1_01_M00987 TRANSFAC - 16115116 16115135 0.0E+00 TTTTTTATTTTGGTTTTCTT 20 V_FOXP1_01_M00987 TRANSFAC - 16115118 16115137 9.0E-06 TGTTTTTTATTTTGGTTTTC 20 V_XVENT1_01_M00445 TRANSFAC + 16119375 16119387 7.0E-06 GGCCGATTTGTCC 13 V_ZFP187_03_M02830 TRANSFAC - 16116864 16116877 2.0E-06 TTATGTACCTATTT 14 V_CDX2_Q5_01_M01659 TRANSFAC + 16116871 16116881 1.0E-05 TACATAAATAC 11 V_EVI1_05_M00082 TRANSFAC + 16116859 16116869 2.0E-06 AGATAAAATAG 11 V_BTEB3_Q5_M01865 TRANSFAC - 16120270 16120282 4.0E-06 TTATAGGAAGAGT 13 V_BTEB3_Q5_M01865 TRANSFAC - 16120302 16120314 5.0E-06 TAAAAGGAAGCGT 13 V_GATA2_02_M00348 TRANSFAC + 16116857 16116866 5.0E-06 AGAGATAAAA 10 V_YY1_02_M00069 TRANSFAC + 16118831 16118850 0.0E+00 TGGCCGCCATCTTGACTCAA 20 V_FOXA2_04_M02749 TRANSFAC + 16116865 16116881 3.0E-06 AATAGGTACATAAATAC 17 V_FOXA2_04_M02749 TRANSFAC - 16117048 16117064 8.0E-06 ATTAGGTAAACATCTAC 17 V_OBOX1_01_M01450 TRANSFAC + 16120814 16120830 8.0E-06 TGAAAGGGATTTAAGTG 17 V_CEBP_Q3_M00770 TRANSFAC - 16117055 16117066 8.0E-06 ATATTAGGTAAA 12 V_EVI1_04_M00081 TRANSFAC + 16116859 16116873 9.0E-06 AGATAAAATAGGTAC 15 V_BCL6_01_M01183 TRANSFAC + 16115025 16115040 5.0E-06 TATTCTAGTAATATTT 16 V_BCL6_01_M01183 TRANSFAC + 16115026 16115041 0.0E+00 ATTCTAGTAATATTTT 16 V_DEAF1_02_M01002 TRANSFAC - 16120215 16120239 2.0E-06 TAAAACTCGGGCCTTTCTCGTAATT 25 V_HOXA13_02_M01297 TRANSFAC + 16115126 16115134 4.0E-06 AAATAAAAA 9 V_AR_Q6_01_M01996 TRANSFAC - 16115846 16115860 4.0E-06 GTTCCATCTGTTCTT 15 V_NFAT3_Q3_M01734 TRANSFAC - 16115063 16115072 6.0E-06 TTTTTTTCCT 10 V_NFAT3_Q3_M01734 TRANSFAC - 16119169 16119178 6.0E-06 AGTTTTTCCT 10 V_GLI1_01_M01702 TRANSFAC + 16115042 16115052 3.0E-06 GACCACACAAG 11 V_YY1_Q6_M00793 TRANSFAC + 16118836 16118844 7.0E-06 GCCATCTTG 9 V_HNF3_Q6_01_M01012 TRANSFAC - 16118101 16118118 6.0E-06 TTTATTGTTGGTGTTTTC 18 V_PITX2_Q6_M02114 TRANSFAC + 16119556 16119565 1.0E-06 TGTAATCCCA 10 V_ZFP691_03_M02833 TRANSFAC + 16115185 16115201 5.0E-06 TTTCCAGTGCTCTTAAA 17 V_PAX3_B_M00327 TRANSFAC + 16119541 16119561 1.0E-06 GCAGTGGGTCACGCTTGTAAT 21 V_LDSPOLYA_B_M00317 TRANSFAC - 16115126 16115141 2.0E-06 CATCTGTTTTTTATTT 16 V_AR_03_M00956 TRANSFAC - 16115841 16115867 3.0E-06 ATATTTAGTTCCATCTGTTCTTTTACT 27 V_TAL1_GATA1_01_M02243 TRANSFAC + 16116848 16116865 1.0E-06 CTGCTCTCAAGAGATAAA 18 V_LXRB_RXRA_Q5_M02021 TRANSFAC + 16119597 16119611 5.0E-06 TAAGGTCAGGAGTTC 15 V_BCL6_02_M01185 TRANSFAC + 16119318 16119331 0.0E+00 TACTTTCTAGGGCT 14 V_RPC155_01_M01798 TRANSFAC + 16119602 16119617 0.0E+00 TCAGGAGTTCGAGACC 16 V_TAL1_Q6_M00993 TRANSFAC - 16115849 16115858 3.0E-06 TCCATCTGTT 10 V_GLI3_02_M01704 TRANSFAC + 16115042 16115052 2.0E-06 GACCACACAAG 11 V_ZNF219_01_M01122 TRANSFAC + 16118561 16118572 5.0E-06 CACCCCCCGCCC 12 V_ZNF219_01_M01122 TRANSFAC + 16118860 16118871 7.0E-06 CTCCCCCCAGCC 12 V_HELIOSA_02_M01004 TRANSFAC + 16115096 16115106 1.0E-06 TCAAGGAAAAA 11 V_HELIOSA_02_M01004 TRANSFAC + 16119166 16119176 0.0E+00 AAAAGGAAAAA 11 V_FOXA2_02_M02853 TRANSFAC + 16115124 16115138 4.0E-06 CAAAATAAAAAACAG 15 V_PR_Q2_M00960 TRANSFAC + 16115844 16115853 9.0E-06 AAAAGAACAG 10 V_PR_01_M00954 TRANSFAC - 16115841 16115867 4.0E-06 ATATTTAGTTCCATCTGTTCTTTTACT 27 V_OCT1_02_M00136 TRANSFAC + 16117059 16117073 9.0E-06 CCTAATATTCAAGAT 15 V_ARID5A_03_M02736 TRANSFAC - 16115028 16115041 4.0E-06 AAAATATTACTAGA 14 V_NFAT_Q6_M00302 TRANSFAC - 16115182 16115193 6.0E-06 CACTGGAAAACT 12 V_NFAT_Q6_M00302 TRANSFAC + 16119166 16119177 4.0E-06 AAAAGGAAAAAC 12 V_XFD3_01_M00269 TRANSFAC - 16117049 16117062 4.0E-06 TAGGTAAACATCTA 14 V_AP2BETA_Q3_M01858 TRANSFAC + 16118708 16118723 2.0E-06 GCCCCGGCCTGAGGAG 16 V_AP2BETA_Q3_M01858 TRANSFAC - 16118862 16118877 9.0E-06 TCCGCGGGCTGGGGGG 16 V_PAX4_05_M01385 TRANSFAC - 16118205 16118221 9.0E-06 AGAGTAAATTAGTTCAC 17 V_PAX4_05_M01385 TRANSFAC + 16118206 16118222 7.0E-06 TGAACTAATTTACTCTG 17 V_HMX1_01_M00433 TRANSFAC - 16118223 16118232 1.0E-06 CAAGTGCGTG 10 V_TTF1_Q6_M00794 TRANSFAC + 16116851 16116862 7.0E-06 CTCTCAAGAGAT 12 V_YY1_Q6_02_M01035 TRANSFAC + 16118833 16118843 7.0E-06 GCCGCCATCTT 11 V_REX1_03_M01744 TRANSFAC - 16118832 16118843 0.0E+00 AAGATGGCGGCC 12 Tal1_Gata1_MA0140.1 JASPAR + 16116848 16116865 1.0E-06 CTGCTCTCAAGAGATAAA 18 V_EVI1_Q3_M02002 TRANSFAC - 16116883 16116891 4.0E-06 TATCTTGTA 9 V_GR_Q6_M00192 TRANSFAC - 16115845 16115863 0.0E+00 TTAGTTCCATCTGTTCTTT 19 V_MEF2_04_M00233 TRANSFAC + 16119643 16119664 7.0E-06 GTCACTACTAAAAATACAAAAA 22 V_BBX_04_M02843 TRANSFAC + 16120370 16120386 9.0E-06 TCTGTGTTAAAACACAA 17 V_CDC5_01_M00478 TRANSFAC - 16120371 16120382 1.0E-05 GTTTTAACACAG 12 V_STAT4_Q5_M02117 TRANSFAC + 16115095 16115104 5.0E-06 TTCAAGGAAA 10 V_STAT4_Q5_M02117 TRANSFAC + 16120217 16120226 1.0E-05 TTACGAGAAA 10 V_BRACH_01_M00150 TRANSFAC - 16120549 16120572 6.0E-06 AACGCCACACACAGGAGCCACATT 24 V_TBP_06_M02814 TRANSFAC - 16120288 16120303 1.0E-05 GTCTTATATATAAGCT 16 V_LHX3b_01_M01971 TRANSFAC + 16118208 16118217 1.0E-05 AACTAATTTA 10 V_ISGF4G_04_M02875 TRANSFAC - 16115030 16115043 2.0E-06 TCAAAATATTACTA 14 V_FOXO1_Q5_M01216 TRANSFAC + 16115131 16115139 1.0E-05 AAAAACAGA 9 V_KAISO_01_M01119 TRANSFAC - 16118628 16118637 9.0E-06 CTCCTGCTAG 10 V_IRF7_01_M00453 TRANSFAC + 16119162 16119179 9.0E-06 TGGGAAAAGGAAAAACTC 18 V_ZFP691_04_M02937 TRANSFAC + 16120602 16120618 8.0E-06 TTTGGGACTCCTCAGAA 17 V_GR_Q6_02_M01836 TRANSFAC - 16115845 16115857 3.0E-06 CCATCTGTTCTTT 13 V_YY1_03_M02044 TRANSFAC + 16118833 16118844 1.0E-06 GCCGCCATCTTG 12 V_MTF1_06_M02882 TRANSFAC + 16115126 16115139 1.0E-06 AAATAAAAAACAGA 14 V_LBP9_01_M01592 TRANSFAC + 16115820 16115836 1.0E-05 CTAGTAAAATCCAGTAT 17 V_GLI2_01_M01703 TRANSFAC + 16115042 16115052 3.0E-06 GACCACACAAG 11 V_HIF1_Q3_M00797 TRANSFAC + 16118698 16118711 8.0E-06 GCCGACGTGCGCCC 14 V_TAL1_01_M01591 TRANSFAC + 16120761 16120773 3.0E-06 TTTGCTTCTCTGC 13 V_FOXL1_02_M02857 TRANSFAC + 16115120 16115135 0.0E+00 AAACCAAAATAAAAAA 16 V_FOXJ3_06_M02855 TRANSFAC + 16115119 16115135 1.0E-06 AAAACCAAAATAAAAAA 17 V_NKX3A_02_M01383 TRANSFAC + 16116864 16116880 7.0E-06 AAATAGGTACATAAATA 17 V_GATA3_02_M00350 TRANSFAC + 16116857 16116866 2.0E-06 AGAGATAAAA 10 V_PLAG1_01_M01778 TRANSFAC + 16120780 16120795 1.0E-06 GAGGCCATAGGAGGGG 16 V_PITX1_01_M01484 TRANSFAC + 16120814 16120830 5.0E-06 TGAAAGGGATTTAAGTG 17 V_ZFP206_01_M01742 TRANSFAC + 16120513 16120523 5.0E-06 TGCGCAGGCTC 11 V_BDP1_01_M01796 TRANSFAC - 16119606 16119617 2.0E-06 GGTCTCGAACTC 12 V_RBPJK_01_M01112 TRANSFAC + 16119158 16119168 1.0E-05 GGCGTGGGAAA 11 V_FPM315_01_M01587 TRANSFAC - 16118907 16118918 2.0E-06 GAAGGAGGAGGA 12 V_FOXO3_01_M00477 TRANSFAC - 16118098 16118111 6.0E-06 TTGGTGTTTTCTTA 14 V_FOXA2_03_M02260 TRANSFAC + 16117053 16117064 9.0E-06 TGTTTACCTAAT 12 V_PITX2_Q2_M00482 TRANSFAC + 16119556 16119566 1.0E-06 TGTAATCCCAG 11 V_P63_01_M01656 TRANSFAC + 16118531 16118550 4.0E-06 GGACGGGTCCCGACCTGCCC 20 V_P63_01_M01656 TRANSFAC - 16118531 16118550 4.0E-06 GGGCAGGTCGGGACCCGTCC 20 V_LXRA_RXRA_Q3_M00647 TRANSFAC + 16119595 16119609 3.0E-06 CTTAAGGTCAGGAGT 15 V_GATA2_03_M00349 TRANSFAC + 16116857 16116866 3.0E-06 AGAGATAAAA 10 V_SRF_06_M02916 TRANSFAC + 16115061 16115077 6.0E-06 GTAGGAAAAAAATGGTA 17 V_SRF_06_M02916 TRANSFAC + 16115124 16115140 8.0E-06 CAAAATAAAAAACAGAT 17 V_HFH3_01_M00289 TRANSFAC - 16116871 16116883 5.0E-06 AGGTATTTATGTA 13 V_DLX3_02_M02051 TRANSFAC + 16120213 16120220 5.0E-06 ATAATTAC 8 V_FOXJ2_01_M00422 TRANSFAC - 16117048 16117065 5.0E-06 TATTAGGTAAACATCTAC 18 V_SOX18_04_M02905 TRANSFAC - 16118206 16118221 8.0E-06 AGAGTAAATTAGTTCA 16 V_SATB1_01_M01232 TRANSFAC + 16115027 16115038 9.0E-06 TTCTAGTAATAT 12 V_SOX1_03_M02802 TRANSFAC - 16120239 16120254 7.0E-06 TTCGAATTCATTTCTT 16 V_PR_02_M00957 TRANSFAC - 16115841 16115867 6.0E-06 ATATTTAGTTCCATCTGTTCTTTTACT 27 V_PIT1_Q6_M00802 TRANSFAC - 16120245 16120262 8.0E-06 TCTTCATTTTCGAATTCA 18 V_ARP1_01_M00155 TRANSFAC - 16119597 16119612 4.0E-06 CGAACTCCTGACCTTA 16 V_MEF2A_05_M01301 TRANSFAC + 16120289 16120300 6.0E-06 GCTTATATATAA 12 V_MEF2A_05_M01301 TRANSFAC - 16120291 16120302 8.0E-06 TCTTATATATAA 12 V_AP2ALPHA_03_M01047 TRANSFAC + 16120734 16120748 7.0E-06 CCCGCCTAAGGCACT 15 V_AP2ALPHA_03_M01047 TRANSFAC - 16120734 16120748 7.0E-06 AGTGCCTTAGGCGGG 15 V_TCF3_05_M02920 TRANSFAC + 16115120 16115134 3.0E-06 AAACCAAAATAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 16115121 16115135 2.0E-06 AACCAAAATAAAAAA 15 V_EVI1_03_M00080 TRANSFAC + 16116859 16116869 8.0E-06 AGATAAAATAG 11 V_PAX4_04_M00380 TRANSFAC + 16115001 16115030 7.0E-06 AAAAAATAGGTTGTATCTGAAGACTATTCT 30 V_ZIC1_05_M02939 TRANSFAC - 16120505 16120519 7.0E-06 CTGCGCAGTAGGAAA 15 V_TR4_03_M01782 TRANSFAC - 16120898 16120910 6.0E-06 GGTTCAGAGGTAA 13 V_GATA1_06_M00347 TRANSFAC + 16116857 16116866 8.0E-06 AGAGATAAAA 10 V_HOXC8_01_M01321 TRANSFAC - 16115150 16115165 9.0E-06 ATGTAGTAATAACCGT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.