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SOX13 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 9580 SRY (sex determining region Y)-box 13 chr1 + 204037245 - 204042745 204042245 V_SOX13_03_M02797 Transcription Factor Binding Sites   Download all TFBS in the SOX13 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NF-kappaB_MA0061.1 JASPAR + 204044042 204044051 1.0E-06 GGGAATTTCC 10 FOXF2_MA0030.1 JASPAR + 204043638 204043651 8.0E-06 CGTACGTAAACACA 14 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 204042093 204042109 5.0E-06 ATCAACAGCTGGAAACC 17 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 204043640 204043651 9.0E-06 TACGTAAACACA 12 PDX1_homeodomain_DBD_dimeric_18_1 SELEX - 204046073 204046090 9.0E-06 TTACTTAAAAGTATTTAC 18 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX + 204043616 204043627 3.0E-06 TGTTTTCCCACC 12 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX - 204043861 204043874 6.0E-06 AAGTTCAAAATTCA 14 EWSR1-FLI1_MA0149.1 JASPAR - 204042175 204042192 6.0E-06 GGAGGGAGGGAGGGTGGG 18 EWSR1-FLI1_MA0149.1 JASPAR - 204042179 204042196 1.0E-06 GGGAGGAGGGAGGGAGGG 18 SOX9_HMG_DBD_monomeric_9_1 SELEX - 204043612 204043620 9.0E-06 AAACAATGG 9 ZNF238_C2H2_full_monomeric_13_1 SELEX + 204042095 204042107 6.0E-06 TTTCCAGCTGTTG 13 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 204046074 204046089 6.0E-06 TAAATACTTTTAAGTA 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 204046074 204046089 4.0E-06 TAAATACTTTTAAGTA 16 REL_MA0101.1 JASPAR + 204044042 204044051 2.0E-06 GGGAATTTCC 10 RELA_MA0107.1 JASPAR + 204044042 204044051 1.0E-06 GGGAATTTCC 10 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX + 204046151 204046162 6.0E-06 AAACATATGTAG 12 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 204043859 204043874 7.0E-06 AAGTTCAAAATTCACT 16 SRY_MA0084.1 JASPAR - 204043614 204043622 9.0E-06 GAAAACAAT 9 OLIG1_bHLH_DBD_dimeric_10_1 SELEX + 204046152 204046161 1.0E-05 AACATATGTA 10 NFATC1_NFAT_full_dimeric_20_1 SELEX + 204042138 204042157 9.0E-06 GGAGGAAACTCTCTGTCCCT 20 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX - 204043860 204043874 6.0E-06 AAGTTCAAAATTCAC 15 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX - 204047160 204047175 8.0E-06 GAGGTCAGGAGTTCGA 16 Atoh1_bHLH_DBD_dimeric_10_1 SELEX + 204046152 204046161 6.0E-06 AACATATGTA 10 HNF4A_MA0114.1 JASPAR - 204043861 204043873 7.0E-06 AGTTCAAAATTCA 13 SOX9_MA0077.1 JASPAR - 204043612 204043620 2.0E-06 AAACAATGG 9 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 204047161 204047175 2.0E-06 GAGGTCAGGAGTTCG 15 RORA_1_MA0071.1 JASPAR + 204046157 204046166 1.0E-05 ATGTAGGTCA 10 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 204043861 204043874 7.0E-06 AAGTTCAAAATTCA 14 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX + 204046152 204046161 1.0E-05 AACATATGTA 10 RORA_2_MA0072.1 JASPAR + 204046154 204046167 0.0E+00 CATATGTAGGTCAG 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 204046149 204046162 6.0E-06 CTACATATGTTTTC 14 V_ELF5_02_M01980 TRANSFAC - 204044045 204044054 3.0E-06 CCCGGAAATT 10 V_MEQ_01_M02049 TRANSFAC - 204043095 204043103 7.0E-06 AACACACAC 9 V_MEQ_01_M02049 TRANSFAC + 204043646 204043654 7.0E-06 AACACACAC 9 V_FOXP1_01_M00987 TRANSFAC + 204043093 204043112 1.0E-06 GTGTGTGTGTTTGTGTGTGT 20 V_FOXP1_01_M00987 TRANSFAC + 204043099 204043118 1.0E-06 GTGTTTGTGTGTGTGTGTGT 20 V_FOXP1_01_M00987 TRANSFAC + 204043103 204043122 1.0E-06 TTGTGTGTGTGTGTGTGTGT 20 V_FOXP1_01_M00987 TRANSFAC - 204043645 204043664 5.0E-06 TTGTGTGTGCGTGTGTGTTT 20 V_NFKAPPAB65_01_M00052 TRANSFAC + 204044042 204044051 1.0E-06 GGGAATTTCC 10 V_AP2ALPHA_Q6_M01857 TRANSFAC + 204047232 204047242 6.0E-06 TGCCCCCGGCC 11 V_NFKB_C_M00208 TRANSFAC + 204044041 204044052 7.0E-06 TGGGAATTTCCG 12 V_TCF3_01_M01594 TRANSFAC - 204046299 204046311 5.0E-06 GCTTTCATTTGCT 13 V_NFKB_Q6_01_M00774 TRANSFAC - 204044041 204044056 3.0E-06 TGCCCGGAAATTCCCA 16 V_EBF_Q6_M00977 TRANSFAC - 204041835 204041845 5.0E-06 TTCCCTTAAGA 11 V_CHOP_01_M00249 TRANSFAC - 204046277 204046289 9.0E-06 ACCTGCAATCCCC 13 V_RORA1_01_M00156 TRANSFAC + 204046155 204046167 9.0E-06 ATATGTAGGTCAG 13 V_NERF_01_M01976 TRANSFAC - 204044045 204044054 7.0E-06 CCCGGAAATT 10 V_IK_Q5_M01169 TRANSFAC + 204041901 204041910 8.0E-06 GTTGGGAGGC 10 V_RELBP52_01_M01239 TRANSFAC + 204044042 204044051 7.0E-06 GGGAATTTCC 10 V_RORA_Q4_M01138 TRANSFAC + 204046156 204046166 5.0E-06 TATGTAGGTCA 11 V_MEF2_02_M00231 TRANSFAC + 204044760 204044781 7.0E-06 TTAAGGGCCAAATATAGCCTAG 22 V_ELF1_01_M01975 TRANSFAC - 204044045 204044054 4.0E-06 CCCGGAAATT 10 V_EAR2_Q2_M01728 TRANSFAC - 204042523 204042536 3.0E-06 TGCCCTCTGCCCTG 14 V_AP2_Q6_01_M00915 TRANSFAC + 204043697 204043709 2.0E-06 CCGTCCCCAGGCG 13 V_FOXJ1_03_M02750 TRANSFAC + 204043640 204043655 1.0E-05 TACGTAAACACACACG 16 V_HNF4A_03_M02220 TRANSFAC - 204043861 204043873 7.0E-06 AGTTCAAAATTCA 13 V_AP2_Q6_M00189 TRANSFAC - 204043719 204043730 9.0E-06 ATCCCGCGGGCG 12 V_PITX2_Q6_M02114 TRANSFAC - 204047210 204047219 1.0E-06 TGTAATCCCA 10 V_COUPTF_Q6_M01036 TRANSFAC - 204042519 204042541 4.0E-06 CCCTCTGCCCTCTGCCCTGGGCT 23 V_COUPTF_Q6_M01036 TRANSFAC - 204042526 204042548 0.0E+00 CTCTCTGCCCTCTGCCCTCTGCC 23 V_GM497_04_M02864 TRANSFAC + 204043643 204043658 1.0E-05 GTAAACACACACGCAC 16 V_LXRB_RXRA_Q5_M02021 TRANSFAC - 204047162 204047176 2.0E-06 TGAGGTCAGGAGTTC 15 V_PPARGRXRA_01_M02262 TRANSFAC + 204042522 204042536 1.0E-06 CCAGGGCAGAGGGCA 15 V_ELF2_02_M02054 TRANSFAC - 204044045 204044054 4.0E-06 CCCGGAAATT 10 V_TAL1_Q6_M00993 TRANSFAC + 204042097 204042106 7.0E-06 TCCAGCTGTT 10 V_ZNF219_01_M01122 TRANSFAC + 204043175 204043186 9.0E-06 CACCCCCAACCC 12 V_ZNF219_01_M01122 TRANSFAC + 204043455 204043466 8.0E-06 CACCCCCACCCC 12 V_FREAC3_01_M00291 TRANSFAC + 204043638 204043653 2.0E-06 CGTACGTAAACACACA 16 V_CREL_01_M00053 TRANSFAC + 204044042 204044051 2.0E-06 GGGAATTTCC 10 V_KROX_Q6_M00982 TRANSFAC + 204043453 204043466 3.0E-06 CCCACCCCCACCCC 14 V_NFKB_Q6_M00194 TRANSFAC + 204044040 204044053 7.0E-06 CTGGGAATTTCCGG 14 V_EVI1_01_M00078 TRANSFAC + 204043790 204043805 5.0E-06 GGAGAGGACAAGAGAC 16 V_MAZ_Q6_01_M02023 TRANSFAC - 204042182 204042195 3.0E-06 GGAGGAGGGAGGGA 14 V_EHF_02_M01974 TRANSFAC - 204044045 204044054 5.0E-06 CCCGGAAATT 10 V_RREB1_01_M00257 TRANSFAC - 204043095 204043108 6.0E-06 ACACAAACACACAC 14 V_RREB1_01_M00257 TRANSFAC - 204043099 204043112 1.0E-05 ACACACACAAACAC 14 V_PNR_01_M01650 TRANSFAC - 204043861 204043874 1.0E-06 AAGTTCAAAATTCA 14 V_MEF2_Q6_01_M00941 TRANSFAC - 204044767 204044778 3.0E-06 GGCTATATTTGG 12 V_NKX3A_01_M00451 TRANSFAC - 204046075 204046086 5.0E-06 TTAAAAGTATTT 12 V_ELF4_01_M01979 TRANSFAC - 204044045 204044054 6.0E-06 CCCGGAAATT 10 V_TFIII_Q6_M00706 TRANSFAC - 204042216 204042224 6.0E-06 AGAGGGAGG 9 V_FREAC2_01_M00290 TRANSFAC + 204043638 204043653 6.0E-06 CGTACGTAAACACACA 16 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 204042175 204042183 8.0E-06 GAGGGTGGG 9 V_EBNA1_01_M01745 TRANSFAC - 204042744 204042759 9.0E-06 GGCAGCCTAGGCTTCC 16 V_EBNA1_01_M01745 TRANSFAC + 204046069 204046084 7.0E-06 GACAGTAAATACTTTT 16 V_NANOG_01_M01123 TRANSFAC + 204042875 204042886 5.0E-06 GCGCCCATTTCC 12 V_FPM315_01_M01587 TRANSFAC + 204042129 204042140 1.0E-06 CAGGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 204042132 204042143 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC - 204042187 204042198 1.0E-06 GGGGGAGGAGGG 12 V_FOXO3_01_M00477 TRANSFAC - 204043640 204043653 3.0E-06 TGTGTGTTTACGTA 14 V_PITX2_Q2_M00482 TRANSFAC - 204047209 204047219 1.0E-06 TGTAATCCCAG 11 V_T3RBETA_Q6_01_M02119 TRANSFAC - 204047168 204047184 3.0E-06 GGATAATTTGAGGTCAG 17 V_ZFP281_01_M01597 TRANSFAC - 204043458 204043468 1.0E-06 TGGGGGTGGGG 11 V_LXRA_RXRA_Q3_M00647 TRANSFAC - 204047164 204047178 8.0E-06 TTTGAGGTCAGGAGT 15 V_NFKAPPAB_01_M00054 TRANSFAC + 204044042 204044051 1.0E-06 GGGAATTTCC 10 V_ZFP281_04_M02831 TRANSFAC + 204043456 204043470 2.0E-06 ACCCCCACCCCCACC 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 204042175 204042192 6.0E-06 GGAGGGAGGGAGGGTGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC - 204042179 204042196 1.0E-06 GGGAGGAGGGAGGGAGGG 18 V_FOXJ2_01_M00422 TRANSFAC + 204046067 204046084 9.0E-06 CAGACAGTAAATACTTTT 18 V_ELF_02_M02053 TRANSFAC - 204044045 204044054 6.0E-06 CCCGGAAATT 10 V_ARP1_01_M00155 TRANSFAC + 204047161 204047176 3.0E-06 CGAACTCCTGACCTCA 16 V_UF1H3BETA_Q6_M01068 TRANSFAC - 204043451 204043464 3.0E-06 GGTGGGGGTGGGAC 14 V_UF1H3BETA_Q6_M01068 TRANSFAC - 204043457 204043470 2.0E-06 GGTGGGGGTGGGGG 14 V_RXRLXRB_01_M01198 TRANSFAC - 204043861 204043873 4.0E-06 AGTTCAAAATTCA 13 V_HNF4_01_M00134 TRANSFAC - 204043858 204043876 1.0E-06 TGAAGTTCAAAATTCACTT 19 V_HNF4_01_M00134 TRANSFAC - 204043865 204043883 7.0E-06 CCAGGGCTGAAGTTCAAAA 19 V_FOXK1_03_M02752 TRANSFAC + 204043638 204043654 8.0E-06 CGTACGTAAACACACAC 17 V_RORA2_01_M00157 TRANSFAC + 204046155 204046167 0.0E+00 ATATGTAGGTCAG 13 PPARG_RXRA_MA0065.2 JASPAR + 204042522 204042536 1.0E-06 CCAGGGCAGAGGGCA 15 V_T3RALPHA_Q6_M01724 TRANSFAC - 204047168 204047178 1.0E-06 TTTGAGGTCAG 11 V_ELF4_02_M02056 TRANSFAC - 204044045 204044054 4.0E-06 CCCGGAAATT 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.