Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GOSR2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9570 golgi SNAP receptor complex member 2 chr17 + 44995485 - 45000985 45000485 Transcription Factor Binding Sites   Download all TFBS in the GOSR2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Barhl1_homeodomain_DBD_monomeric_10_1 SELEX + 45000144 45000153 7.0E-06 ATTAAATGGT 10 BARHL2_homeodomain_full_dimeric_16_1 SELEX + 45000146 45000161 7.0E-06 TAAATGGTTTAAAGTG 16 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 45000146 45000161 6.0E-06 TAAATGGTTTAAAGTG 16 HOXA5_MA0158.1 JASPAR - 45003037 45003044 7.0E-06 CACTAATT 8 ESR1_MA0112.2 JASPAR + 45000629 45000648 4.0E-06 AGGCCAGGTGAGCCTGGCTT 20 OTX2_homeodomain_DBD_monomeric_8_1 SELEX + 45000731 45000738 7.0E-06 TTAATCCT 8 BARHL2_homeodomain_full_monomeric_10_1 SELEX + 45000144 45000153 5.0E-06 ATTAAATGGT 10 PITX1_homeodomain_full_monomeric_9_1 SELEX + 45000730 45000738 9.0E-06 CTTAATCCT 9 ELK1_MA0028.1 JASPAR + 45000478 45000487 5.0E-06 AAGCCGGAAA 10 ELK1_MA0028.1 JASPAR + 45000485 45000494 5.0E-06 AAACCGGAAG 10 MAX_MA0058.1 JASPAR + 45002987 45002996 7.0E-06 AAACACGTGG 10 ELF1_ETS_full_monomeric_12_1 SELEX + 45000485 45000496 6.0E-06 AAACCGGAAGGG 12 IRF3_IRF_full_trimeric_21_1 SELEX + 45000476 45000496 9.0E-06 GGAAGCCGGAAACCGGAAGGG 21 V_ELF5_03_M02057 TRANSFAC + 45000105 45000114 8.0E-06 CCAGGAAAAA 10 V_OSR1_03_M02784 TRANSFAC + 45003061 45003076 1.0E-06 CACAACAGTAGCTGAA 16 V_ELK1_04_M01165 TRANSFAC + 45000472 45000482 6.0E-06 GACCGGAAGCC 11 V_GEN_INI_B_M00315 TRANSFAC + 45000378 45000385 1.0E-05 CCTCATTT 8 V_ESR1_01_M02261 TRANSFAC + 45000629 45000648 4.0E-06 AGGCCAGGTGAGCCTGGCTT 20 V_NFAT3_Q3_M01734 TRANSFAC - 45000107 45000116 6.0E-06 TGTTTTTCCT 10 V_POU1F1_Q6_M00744 TRANSFAC + 45000033 45000042 4.0E-06 ATGGATAAAT 10 V_EAR2_Q2_M01728 TRANSFAC + 45000225 45000238 1.0E-05 TCAACTTTGCTCTG 14 V_PU1_Q4_M01172 TRANSFAC + 45000381 45000399 3.0E-06 CATTTCTCCTTCCCCTTCT 19 V_GEN_INI3_B_M00314 TRANSFAC + 45000378 45000385 1.0E-05 CCTCATTT 8 V_HIC1_03_M01073 TRANSFAC - 45000429 45000446 2.0E-06 CAGGGCTGCCCGCACGCG 18 V_CDX2_01_M01449 TRANSFAC + 45000871 45000886 8.0E-06 GCAGGTTATAAAACTT 16 V_AP2BETA_Q3_M01858 TRANSFAC + 45000535 45000550 3.0E-06 GCCGTGGCCTGCGGGG 16 V_CDX2_Q5_M00729 TRANSFAC - 45000874 45000887 0.0E+00 AAAGTTTTATAACC 14 V_SZF11_01_M01109 TRANSFAC + 45000674 45000688 3.0E-06 CCAGGGTAGAGGCCG 15 V_NFE4_Q5_M02105 TRANSFAC - 45000452 45000463 9.0E-06 CTCCCTCCCCTG 12 V_CDX1_01_M01373 TRANSFAC + 45000871 45000886 7.0E-06 GCAGGTTATAAAACTT 16 V_PAX6_Q2_M00979 TRANSFAC - 45000745 45000758 2.0E-06 CTGACCTGGGAGTC 14 V_HBP1_03_M02762 TRANSFAC - 45000006 45000021 2.0E-06 ACATTGAATGAGTGGT 16 V_HOXA5_03_M02271 TRANSFAC - 45003037 45003044 7.0E-06 CACTAATT 8 V_NKX23_01_M01457 TRANSFAC + 45000721 45000736 5.0E-06 TCCGAAGTGCTTAATC 16 V_HOXD9_Q2_M01834 TRANSFAC + 44999996 45000005 9.0E-06 ACACATAATA 10 V_ELF1_Q6_M00746 TRANSFAC + 45000086 45000097 4.0E-06 GAAACAGGAAAA 12 V_ATF1_Q6_M00691 TRANSFAC + 45000662 45000672 8.0E-06 CTCGGACGTCA 11 V_AP3_Q6_M00690 TRANSFAC - 45002140 45002147 5.0E-06 TCTAAATT 8 V_GEN_INI2_B_M00313 TRANSFAC + 45000378 45000385 1.0E-05 CCTCATTT 8 V_ZBTB4_04_M02929 TRANSFAC + 45000409 45000424 7.0E-06 CAACCACTGCTAGTAA 16 V_OSR2_03_M02785 TRANSFAC + 45003061 45003076 3.0E-06 CACAACAGTAGCTGAA 16 V_SOX14_04_M02901 TRANSFAC + 45000026 45000042 1.0E-06 TTACTGGATGGATAAAT 17 V_BARHL2_01_M01446 TRANSFAC - 45000142 45000157 1.0E-05 TTAAACCATTTAATCG 16 V_PIT1_Q6_M00802 TRANSFAC - 45000032 45000049 5.0E-06 CATTCCTATTTATCCATC 18 V_HOXA7_03_M01394 TRANSFAC + 45002135 45002150 4.0E-06 TGAGTAATTTAGAGAA 16 V_DEC_Q1_M00997 TRANSFAC - 45000329 45000341 4.0E-06 CTTCACGTGAAGG 13 V_NANOG_02_M01247 TRANSFAC + 45002143 45002162 1.0E-06 TTAGAGAAAGAATGAAACGA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.