Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GAL3ST1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9514 galactose-3-O-sulfotransferase 1 chr22 - 30960376 - 30965876 30960876 Transcription Factor Binding Sites   Download all TFBS in the GAL3ST1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 30958601 30958611 5.0E-06 AGTGACTCATC 11 RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 30958654 30958671 2.0E-06 GAGGGTCATGGGAAGTCA 18 RARG_nuclearreceptor_full_dimeric_17_1 SELEX - 30958654 30958670 3.0E-06 AGGGTCATGGGAAGTCA 17 EWSR1-FLI1_MA0149.1 JASPAR + 30957621 30957638 6.0E-06 CAGGGGAAGGAAGGAGGG 18 EWSR1-FLI1_MA0149.1 JASPAR + 30957625 30957642 0.0E+00 GGAAGGAAGGAGGGAAAG 18 EWSR1-FLI1_MA0149.1 JASPAR + 30957629 30957646 3.0E-06 GGAAGGAGGGAAAGTTGC 18 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX - 30958654 30958671 1.0E-05 GAGGGTCATGGGAAGTCA 18 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX - 30958654 30958670 4.0E-06 AGGGTCATGGGAAGTCA 17 HNF4A_nuclearreceptor_full_dimeric_16_1 SELEX - 30962306 30962321 4.0E-06 GGGTTCAGAGTCCACG 16 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX - 30958654 30958670 3.0E-06 AGGGTCATGGGAAGTCA 17 JDP2_bZIP_full_dimeric_9_1 SELEX - 30958602 30958610 1.0E-05 ATGAGTCAC 9 MEIS2_MEIS_DBD_dimeric_14_1 SELEX - 30962342 30962355 3.0E-06 ATGACAGGTCCCAA 14 MAFK_bZIP_full_monomeric_12_1 SELEX + 30961422 30961433 9.0E-06 AAAGATGCTGAG 12 ZIC1_C2H2_full_monomeric_14_1 SELEX - 30956786 30956799 6.0E-06 TGCCCCCTGCTGCT 14 V_AP2ALPHA_Q6_M01857 TRANSFAC + 30957726 30957736 9.0E-06 AGCCTGCGGCC 11 V_DBX1_01_M01483 TRANSFAC + 30958043 30958059 7.0E-06 TAATTTTTTTAAAAAGA 17 V_PREP1_01_M01459 TRANSFAC + 30962343 30962358 5.0E-06 TGGGACCTGTCATGCA 16 V_ZFP410_04_M02936 TRANSFAC - 30957739 30957755 5.0E-06 CTTTCCCTCCCCTTATC 17 V_BCL6_01_M01183 TRANSFAC + 30958036 30958051 1.0E-06 TATGAGATAATTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 30958042 30958057 7.0E-06 TTTTTAAAAAAATTAT 16 V_PROP1_01_M01294 TRANSFAC + 30958043 30958053 1.0E-06 TAATTTTTTTA 11 V_MAF_Q6_M00648 TRANSFAC + 30957648 30957663 8.0E-06 TTGCAGGAAGTGGGGG 16 V_NERF_Q2_M00531 TRANSFAC + 30957648 30957665 1.0E-06 TTGCAGGAAGTGGGGGAT 18 V_TCFAP2E_04_M02926 TRANSFAC - 30958044 30958057 6.0E-06 TTTTTAAAAAAATT 14 V_ETS_Q4_M00771 TRANSFAC - 30957651 30957662 6.0E-06 CCCCACTTCCTG 12 V_ELF4_04_M02850 TRANSFAC - 30958039 30958055 6.0E-06 TTTAAAAAAATTATCTC 17 V_ELF4_04_M02850 TRANSFAC - 30958040 30958056 1.0E-06 TTTTAAAAAAATTATCT 17 V_ELF4_04_M02850 TRANSFAC - 30958041 30958057 1.0E-06 TTTTTAAAAAAATTATC 17 V_ELF4_04_M02850 TRANSFAC - 30958042 30958058 3.0E-06 CTTTTTAAAAAAATTAT 17 V_ELF4_04_M02850 TRANSFAC - 30958043 30958059 4.0E-06 TCTTTTTAAAAAAATTA 17 V_BACH1_01_M00495 TRANSFAC + 30962253 30962267 9.0E-06 ACGGTGAGTCAGGGC 15 V_SOX13_03_M02797 TRANSFAC - 30958040 30958055 9.0E-06 TTTAAAAAAATTATCT 16 V_SOX8_04_M02912 TRANSFAC - 30958643 30958656 8.0E-06 TCATTCATCACACA 14 V_PAX2_01_M00098 TRANSFAC + 30962347 30962365 4.0E-06 ACCTGTCATGCATCATGCA 19 V_MATH1_Q2_M01716 TRANSFAC + 30958631 30958640 9.0E-06 GCACCTGGTG 10 V_SOX18_03_M02801 TRANSFAC + 30958041 30958056 7.0E-06 GATAATTTTTTTAAAA 16 V_JUNDM2_04_M02876 TRANSFAC - 30958599 30958614 4.0E-06 AGGGATGAGTCACTGG 16 V_OCT1_08_M01354 TRANSFAC + 30958037 30958052 9.0E-06 ATGAGATAATTTTTTT 16 V_TEL2_Q6_M00678 TRANSFAC - 30957651 30957660 6.0E-06 CCACTTCCTG 10 V_RREB1_01_M00257 TRANSFAC - 30957658 30957671 8.0E-06 CCCCACATCCCCCA 14 V_MAFK_Q3_M02022 TRANSFAC - 30961426 30961436 9.0E-06 TGTCTCAGCAT 11 V_POU6F1_01_M00465 TRANSFAC - 30958042 30958052 9.0E-06 AAAAAAATTAT 11 V_TBP_06_M02814 TRANSFAC + 30958044 30958059 8.0E-06 AATTTTTTTAAAAAGA 16 V_TBP_06_M02814 TRANSFAC - 30958044 30958059 1.0E-06 TCTTTTTAAAAAAATT 16 V_HNF4A_02_M02868 TRANSFAC - 30962304 30962319 1.0E-05 GTTCAGAGTCCACGCT 16 V_BCL6B_04_M02844 TRANSFAC - 30957739 30957754 3.0E-06 TTTCCCTCCCCTTATC 16 V_NEUROD_02_M01288 TRANSFAC - 30956782 30956793 6.0E-06 CTGCTGCTGGGC 12 V_TCF7_04_M02921 TRANSFAC - 30958045 30958059 3.0E-06 TCTTTTTAAAAAAAT 15 V_E2_Q6_01_M00928 TRANSFAC - 30962317 30962332 8.0E-06 TGGACCGTGTTGGGTT 16 V_ETS1_B_M00339 TRANSFAC + 30957650 30957664 3.0E-06 GCAGGAAGTGGGGGA 15 V_EGR1_06_M02744 TRANSFAC - 30957508 30957521 7.0E-06 CCTGCCCCCGCTTT 14 V_SRF_06_M02916 TRANSFAC - 30958040 30958056 3.0E-06 TTTTAAAAAAATTATCT 17 V_SRF_06_M02916 TRANSFAC - 30958042 30958058 5.0E-06 CTTTTTAAAAAAATTAT 17 V_EWSR1FLI1_01_M02252 TRANSFAC + 30957621 30957638 6.0E-06 CAGGGGAAGGAAGGAGGG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 30957625 30957642 0.0E+00 GGAAGGAAGGAGGGAAAG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 30957629 30957646 3.0E-06 GGAAGGAGGGAAAGTTGC 18 V_SOX5_07_M02909 TRANSFAC - 30958036 30958052 4.0E-06 AAAAAAATTATCTCATA 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.