Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ABCC12 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 94160 ATP-binding cassette, sub-family C (CFTR/MRP), member 12 chr16 - 48180181 - 48185681 48180681 Transcription Factor Binding Sites   Download all TFBS in the ABCC12 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxa2_MA0047.2 JASPAR + 48184878 48184889 1.0E-06 TGTTTACTTAAC 12 DLX1_homeodomain_DBD_monomeric_10_1 SELEX + 48184788 48184797 1.0E-06 CATAATTATC 10 FOXA1_MA0148.1 JASPAR + 48184878 48184888 3.0E-06 TGTTTACTTAA 11 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 48184734 48184745 5.0E-06 GCTTAAAATAGA 12 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 48184876 48184887 1.0E-06 TAAGTAAACACA 12 RFX4_RFX_DBD_dimeric_16_1 SELEX - 48178049 48178064 9.0E-06 TGTTGCTGTAGTTACA 16 LHX2_homeodomain_DBD_dimeric_15_1 SELEX + 48184781 48184795 0.0E+00 CCATTACCATAATTA 15 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 48184781 48184795 0.0E+00 TAATTATGGTAATGG 15 LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 48184790 48184804 4.0E-06 GAATTGTGATAATTA 15 FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 48184877 48184887 8.0E-06 TAAGTAAACAC 11 POU1F1_POU_DBD_monomeric_14_1 SELEX - 48184780 48184793 9.0E-06 ATTATGGTAATGGA 14 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 48184734 48184745 4.0E-06 GCTTAAAATAGA 12 MEF2B_MADS_full_dimeric_12_1 SELEX - 48184734 48184745 3.0E-06 GCTTAAAATAGA 12 POU3F3_POU_DBD_monomeric_13_1 SELEX - 48184781 48184793 1.0E-05 ATTATGGTAATGG 13 MEF2A_MA0052.1 JASPAR + 48184735 48184744 7.0E-06 CTATTTTAAG 10 TFCP2_CP2_full_dimer-of-dimers_16_1 SELEX + 48178036 48178051 2.0E-06 TCTGGATTGAACTTGT 16 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 48184878 48184888 7.0E-06 TTAAGTAAACA 11 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX + 48184780 48184796 1.0E-06 TCCATTACCATAATTAT 17 MEOX2_homeodomain_DBD_dimeric_17_1 SELEX - 48184780 48184796 0.0E+00 ATAATTATGGTAATGGA 17 DUXA_homeodomain_DBD_dimeric_13_1 SELEX + 48184941 48184953 1.0E-06 ACAACTTAATCAA 13 POU2F1_POU_DBD_monomeric_12_1 SELEX - 48184782 48184793 5.0E-06 ATTATGGTAATG 12 FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 48184877 48184887 1.0E-05 TAAGTAAACAC 11 DLX5_homeodomain_FL_monomeric_8_1 SELEX + 48184789 48184796 4.0E-06 ATAATTAT 8 DLX5_homeodomain_FL_monomeric_8_1 SELEX - 48184789 48184796 4.0E-06 ATAATTAT 8 V_CDP_03_M01342 TRANSFAC + 48184941 48184957 4.0E-06 ACAACTTAATCAACTAG 17 V_CDP_03_M01342 TRANSFAC - 48184942 48184958 9.0E-06 TCTAGTTGATTAAGTTG 17 V_DUXL_01_M01390 TRANSFAC + 48184942 48184958 0.0E+00 CAACTTAATCAACTAGA 17 V_XFD1_01_M00267 TRANSFAC - 48184874 48184887 6.0E-06 TAAGTAAACACATG 14 V_FOXA2_04_M02749 TRANSFAC - 48184873 48184889 6.0E-06 GTTAAGTAAACACATGG 17 V_DLX3_01_M01400 TRANSFAC + 48184784 48184800 7.0E-06 TTACCATAATTATCACA 17 V_EVI1_04_M00081 TRANSFAC - 48184732 48184746 7.0E-06 AGCTTAAAATAGATA 15 V_MEF2_02_M00231 TRANSFAC - 48184730 48184751 0.0E+00 CTGTTAGCTTAAAATAGATATG 22 V_OCT1_01_M00135 TRANSFAC - 48184778 48184796 9.0E-06 ATAATTATGGTAATGGATT 19 V_POU3F2_02_M00464 TRANSFAC - 48184783 48184792 2.0E-06 TTATGGTAAT 10 V_SOX11_04_M02899 TRANSFAC - 48184792 48184805 6.0E-06 AGAATTGTGATAAT 14 V_CUX1_03_M02958 TRANSFAC + 48184941 48184957 4.0E-06 ACAACTTAATCAACTAG 17 V_CUX1_03_M02958 TRANSFAC - 48184942 48184958 9.0E-06 TCTAGTTGATTAAGTTG 17 V_FOXJ1_03_M02750 TRANSFAC - 48184872 48184887 2.0E-06 TAAGTAAACACATGGT 16 V_HOXA2_01_M01402 TRANSFAC + 48184786 48184801 7.0E-06 ACCATAATTATCACAA 16 V_HFH4_01_M00742 TRANSFAC + 48184875 48184887 2.0E-06 ATGTGTTTACTTA 13 V_DLX2_01_M01468 TRANSFAC + 48184786 48184801 1.0E-05 ACCATAATTATCACAA 16 V_NKX62_Q2_M00489 TRANSFAC - 48184788 48184799 4.0E-06 GTGATAATTATG 12 V_MEF2A_Q6_M02024 TRANSFAC + 48184736 48184745 2.0E-06 TATTTTAAGC 10 V_HOXA6_01_M01392 TRANSFAC + 48184786 48184801 6.0E-06 ACCATAATTATCACAA 16 V_FREAC3_01_M00291 TRANSFAC - 48184874 48184889 8.0E-06 GTTAAGTAAACACATG 16 V_RSRFC4_Q2_M00407 TRANSFAC - 48184731 48184747 5.0E-06 TAGCTTAAAATAGATAT 17 V_ARID3A_02_M02839 TRANSFAC + 48184903 48184917 4.0E-06 AGCAGTATCAGAATT 15 V_HNF3A_01_M01261 TRANSFAC - 48184877 48184886 3.0E-06 AAGTAAACAC 10 V_HNF3_Q6_M00791 TRANSFAC - 48184876 48184888 6.0E-06 TTAAGTAAACACA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 48184878 48184888 5.0E-06 TGTTTACTTAA 11 V_MEF2_03_M00232 TRANSFAC - 48184730 48184751 0.0E+00 CTGTTAGCTTAAAATAGATATG 22 V_DUXBL_01_M02968 TRANSFAC + 48184942 48184958 0.0E+00 CAACTTAATCAACTAGA 17 V_OCT1_04_M00138 TRANSFAC - 48184702 48184724 4.0E-06 TTACATATAGAAATATTTATAGA 23 V_OCT1_04_M00138 TRANSFAC - 48184776 48184798 6.0E-06 TGATAATTATGGTAATGGATTCA 23 V_OCT1_08_M01354 TRANSFAC - 48184786 48184801 5.0E-06 TTGTGATAATTATGGT 16 V_MEF2_04_M00233 TRANSFAC - 48184730 48184751 3.0E-06 CTGTTAGCTTAAAATAGATATG 22 V_PBX1_05_M01967 TRANSFAC - 48179544 48179557 4.0E-06 AATGAGTGACAGCA 14 V_MEF2_Q6_01_M00941 TRANSFAC + 48184733 48184744 5.0E-06 ATCTATTTTAAG 12 V_HFH8_01_M00294 TRANSFAC + 48184875 48184887 8.0E-06 ATGTGTTTACTTA 13 V_FOXL1_04_M02753 TRANSFAC - 48184873 48184889 5.0E-06 GTTAAGTAAACACATGG 17 V_FOXO3_01_M00477 TRANSFAC + 48184874 48184887 5.0E-06 CATGTGTTTACTTA 14 V_FOXA2_03_M02260 TRANSFAC + 48184878 48184889 1.0E-06 TGTTTACTTAAC 12 V_RSRFC4_01_M00026 TRANSFAC + 48184732 48184747 1.0E-05 TATCTATTTTAAGCTA 16 V_HFH3_01_M00289 TRANSFAC + 48184875 48184887 4.0E-06 ATGTGTTTACTTA 13 V_MOX1_01_M01443 TRANSFAC + 48184786 48184801 9.0E-06 ACCATAATTATCACAA 16 V_HOXD3_01_M01338 TRANSFAC - 48184786 48184801 5.0E-06 TTGTGATAATTATGGT 16 V_FREAC4_01_M00292 TRANSFAC - 48184874 48184889 0.0E+00 GTTAAGTAAACACATG 16 V_GBX1_01_M01371 TRANSFAC - 48184785 48184801 9.0E-06 TTGTGATAATTATGGTA 17 V_HOXB5_01_M01319 TRANSFAC + 48184786 48184801 5.0E-06 ACCATAATTATCACAA 16 V_RFX1_02_M00281 TRANSFAC + 48178048 48178065 0.0E+00 TTGTAACTACAGCAACAA 18 V_HOX13_02_M01452 TRANSFAC + 48184786 48184801 1.0E-05 ACCATAATTATCACAA 16 V_HOXC8_01_M01321 TRANSFAC - 48184786 48184801 1.0E-06 TTGTGATAATTATGGT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.