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GCFC1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 94104 PAX3 and PAX7 binding protein 1 chr21 - 34143669 - 34149169 34144169 Transcription Factor Binding Sites   Download all TFBS in the GCFC1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX - 34144604 34144617 5.0E-06 CAGGTCAAAGTTTG 14 IRF7_IRF_DBD_dimeric_14_1 SELEX + 34144848 34144861 5.0E-06 AGGAAAGCAAAAGT 14 EVX1_homeodomain_DBD_monomeric_10_1 SELEX - 34144631 34144640 7.0E-06 AGTAATTACC 10 IRF1_MA0050.1 JASPAR + 34144850 34144861 9.0E-06 GAAAGCAAAAGT 12 Meis3_MEIS_DBD_dimeric_12_1 SELEX - 34144983 34144994 8.0E-06 TGAGAACTGTCA 12 EOMES_TBX_DBD_monomeric_13_1 SELEX + 34144571 34144583 9.0E-06 AAAGTGTGATCTA 13 EOMES_TBX_DBD_monomeric_13_1 SELEX + 34144617 34144629 7.0E-06 GAGGTGTGACTAT 13 Hoxa2_homeodomain_DBD_monomeric_10_1 SELEX - 34144631 34144640 6.0E-06 AGTAATTACC 10 SP1_MA0079.2 JASPAR - 34143569 34143578 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 34144528 34144537 9.0E-06 CCCCTCCTCC 10 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX - 34144604 34144617 2.0E-06 CAGGTCAAAGTTTG 14 SOX7_HMG_full_dimeric_17_1 SELEX - 34144371 34144387 9.0E-06 AAACAACACCAGAGTTC 17 HESX1_homeodomain_DBD_dimeric_15_1 SELEX + 34144625 34144639 5.0E-06 ACTATTGGTAATTAC 15 HESX1_homeodomain_DBD_dimeric_15_1 SELEX - 34144632 34144646 3.0E-06 ATAACTAGTAATTAC 15 LHX9_homeodomain_DBD_dimeric_13_1 SELEX + 34144633 34144645 0.0E+00 TAATTACTAGTTA 13 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 34144849 34144863 3.0E-06 GGAAAGCAAAAGTGT 15 MEOX1_homeodomain_full_monomeric_10_1 SELEX - 34144631 34144640 4.0E-06 AGTAATTACC 10 Meis2_MEIS_DBD_dimeric_12_1 SELEX + 34144387 34144398 8.0E-06 TGACAGGTCACA 12 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 34144968 34144978 8.0E-06 CTTCCCCACCC 11 MEIS2_MEIS_DBD_dimeric_14_1 SELEX + 34144386 34144399 1.0E-06 TTGACAGGTCACAA 14 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX - 34144604 34144617 3.0E-06 CAGGTCAAAGTTTG 14 IRF3_IRF_full_trimeric_21_1 SELEX + 34144842 34144862 3.0E-06 GGAACAAGGAAAGCAAAAGTG 21 NRF1_NRF_full_dimeric_12_1 SELEX + 34144116 34144127 2.0E-06 CGCGCATGCGCC 12 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX - 34144604 34144617 4.0E-06 CAGGTCAAAGTTTG 14 IRF2_MA0051.1 JASPAR + 34144849 34144866 2.0E-06 GGAAAGCAAAAGTGTTTC 18 V_AP2ALPHA_Q6_M01857 TRANSFAC + 34143748 34143758 6.0E-06 CGCCCCCGGCC 11 V_KLF15_Q2_M01714 TRANSFAC + 34144529 34144542 7.0E-06 GAGGAGGGGAGAGG 14 V_MEIS1_02_M01419 TRANSFAC - 34144383 34144398 1.0E-06 TGTGACCTGTCAAACA 16 V_DBX1_01_M01483 TRANSFAC + 34144629 34144645 6.0E-06 TTGGTAATTACTAGTTA 17 V_PREP1_01_M01459 TRANSFAC - 34144383 34144398 0.0E+00 TGTGACCTGTCAAACA 16 V_PREP1_01_M01459 TRANSFAC - 34144979 34144994 9.0E-06 TGAGAACTGTCACAAC 16 V_AHR_Q5_M00778 TRANSFAC + 34144997 34145007 2.0E-06 CTTGCGTGACA 11 V_DMRT3_01_M01148 TRANSFAC + 34144791 34144805 1.0E-06 GTTATGATACAATGT 15 V_ZFX_01_M01593 TRANSFAC - 34143762 34143777 9.0E-06 CCCCGGGCCTCGGGGC 16 V_STAT_Q6_M00777 TRANSFAC - 34143246 34143258 3.0E-06 CACACTTCTTGGA 13 V_EOMES_03_M02747 TRANSFAC + 34144614 34144630 8.0E-06 CCTGAGGTGTGACTATT 17 V_MEIS1AHOXA9_01_M00420 TRANSFAC + 34144983 34144996 3.0E-06 TGACAGTTCTCAGA 14 V_EAR2_Q2_M01728 TRANSFAC + 34144604 34144617 5.0E-06 CAAACTTTGACCTG 14 V_SP1_03_M02281 TRANSFAC - 34143569 34143578 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 34144528 34144537 9.0E-06 CCCCTCCTCC 10 V_HOXC6_01_M01406 TRANSFAC - 34144627 34144643 4.0E-06 ACTAGTAATTACCAATA 17 V_HOXC6_01_M01406 TRANSFAC + 34144628 34144644 8.0E-06 ATTGGTAATTACTAGTT 17 V_COUPTF_Q6_M01036 TRANSFAC - 34144528 34144550 4.0E-06 CTCTCTGGCCTCTCCCCTCCTCC 23 V_EVX1_01_M01475 TRANSFAC - 34144627 34144643 7.0E-06 ACTAGTAATTACCAATA 17 V_PAX_Q6_M00808 TRANSFAC - 34144930 34144940 6.0E-06 CTGAAACTCAC 11 V_BCL6_02_M01185 TRANSFAC + 34144914 34144927 3.0E-06 TACTTTCCAAAGCT 14 V_TGIF2_01_M01407 TRANSFAC - 34144383 34144398 4.0E-06 TGTGACCTGTCAAACA 16 V_HMBOX1_01_M01456 TRANSFAC + 34144634 34144650 4.0E-06 AATTACTAGTTATTCTT 17 V_MEIS2_01_M01488 TRANSFAC - 34144383 34144398 1.0E-06 TGTGACCTGTCAAACA 16 V_HOXA6_01_M01392 TRANSFAC - 34144627 34144642 4.0E-06 CTAGTAATTACCAATA 16 V_TGIF_02_M01346 TRANSFAC + 34144382 34144398 5.0E-06 TTGTTTGACAGGTCACA 17 V_HNF4_01_B_M00411 TRANSFAC - 34144603 34144617 5.0E-06 CAGGTCAAAGTTTGG 15 V_TBX5_02_M01020 TRANSFAC + 34144616 34144625 8.0E-06 TGAGGTGTGA 10 V_HOXB6_01_M01460 TRANSFAC + 34144627 34144642 0.0E+00 TATTGGTAATTACTAG 16 V_HOXB6_01_M01460 TRANSFAC - 34144629 34144644 5.0E-06 AACTAGTAATTACCAA 16 V_IRF3_Q3_M01279 TRANSFAC - 34144851 34144863 8.0E-06 ACACTTTTGCTTT 13 V_MAZ_Q6_01_M02023 TRANSFAC + 34144525 34144538 4.0E-06 GGAGGAGGAGGGGA 14 V_MAZ_Q6_01_M02023 TRANSFAC + 34144528 34144541 6.0E-06 GGAGGAGGGGAGAG 14 V_STAT5A_02_M00460 TRANSFAC + 34147266 34147289 4.0E-06 TACCAGGAATGGAGCTTACAGGAC 24 V_PAX2_01_M00098 TRANSFAC - 34144992 34145010 5.0E-06 CTTTGTCACGCAAGTCTGA 19 V_SOX_Q6_M01014 TRANSFAC + 34143680 34143692 4.0E-06 CTCTTTGTTCTCG 13 V_SOX_Q6_M01014 TRANSFAC - 34144391 34144403 5.0E-06 CTCTTTGTGACCT 13 V_AHR_01_M00139 TRANSFAC + 34144990 34145007 0.0E+00 TCTCAGACTTGCGTGACA 18 V_NCX_02_M01420 TRANSFAC + 34144629 34144645 9.0E-06 TTGGTAATTACTAGTTA 17 V_TGIF1_01_M03111 TRANSFAC + 34144382 34144398 5.0E-06 TTGTTTGACAGGTCACA 17 V_CTCF_02_M01259 TRANSFAC + 34143263 34143282 8.0E-06 CAGTGACCTGCAGAGGGCTC 20 V_CTCF_01_M01200 TRANSFAC + 34143265 34143284 3.0E-06 GTGACCTGCAGAGGGCTCGG 20 V_PAX8_B_M00328 TRANSFAC + 34144992 34145009 2.0E-06 TCAGACTTGCGTGACAAA 18 V_IRF7_01_M00453 TRANSFAC + 34144847 34144864 5.0E-06 AAGGAAAGCAAAAGTGTT 18 V_GR_Q6_02_M01836 TRANSFAC + 34143680 34143692 7.0E-06 CTCTTTGTTCTCG 13 V_SP4_Q5_M01273 TRANSFAC - 34143569 34143579 5.0E-06 CCCCCGCCCCC 11 V_HOXB7_01_M01396 TRANSFAC - 34144627 34144642 5.0E-06 CTAGTAATTACCAATA 16 V_MRG2_01_M01395 TRANSFAC - 34144383 34144398 1.0E-06 TGTGACCTGTCAAACA 16 V_HOXB8_01_M01451 TRANSFAC + 34144628 34144643 8.0E-06 ATTGGTAATTACTAGT 16 V_HOXB8_01_M01451 TRANSFAC - 34144628 34144643 5.0E-06 ACTAGTAATTACCAAT 16 V_E2F_Q6_01_M00920 TRANSFAC + 34144503 34144514 4.0E-06 CTCCCGCCAAAC 12 V_MEIS1_01_M00419 TRANSFAC + 34144980 34144991 9.0E-06 TTGTGACAGTTC 12 V_TCF7_04_M02921 TRANSFAC + 34143198 34143212 5.0E-06 CCTTTTTACAAACTC 15 V_GATA3_01_M00077 TRANSFAC - 34145069 34145077 4.0E-06 GAGATAGGG 9 V_DMRT7_01_M01151 TRANSFAC + 34144794 34144807 9.0E-06 ATGATACAATGTTA 14 V_ZFP206_01_M01742 TRANSFAC + 34144116 34144126 2.0E-06 CGCGCATGCGC 11 V_FPM315_01_M01587 TRANSFAC + 34144519 34144530 0.0E+00 GAGGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 34144522 34144533 3.0E-06 GGAGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 34144525 34144536 4.0E-06 GGAGGAGGAGGG 12 V_NRF1_Q6_M00652 TRANSFAC - 34144116 34144125 4.0E-06 CGCATGCGCG 10 V_BARX2_01_M01431 TRANSFAC - 34144627 34144642 7.0E-06 CTAGTAATTACCAATA 16 V_BARX2_01_M01431 TRANSFAC + 34144629 34144644 5.0E-06 TTGGTAATTACTAGTT 16 V_ZFP281_01_M01597 TRANSFAC + 34144965 34144975 5.0E-06 AGGGGGTGGGG 11 V_TITF1_Q3_M00432 TRANSFAC - 34144645 34144654 8.0E-06 ACTCAAGAAT 10 V_E2F_Q4_01_M00919 TRANSFAC + 34144504 34144514 4.0E-06 TCCCGCCAAAC 11 V_EGR1_06_M02744 TRANSFAC - 34143564 34143577 2.0E-06 CCCGCCCCCGTATT 14 V_DMRT2_01_M01147 TRANSFAC + 34144649 34144664 8.0E-06 TTGAGTAATACTTTGT 16 V_DMRT2_01_M01147 TRANSFAC + 34144790 34144805 1.0E-06 AGTTATGATACAATGT 16 V_HB9_01_M01349 TRANSFAC - 34144627 34144642 7.0E-06 CTAGTAATTACCAATA 16 V_VDR_Q3_M00444 TRANSFAC - 34144818 34144832 7.0E-06 GGGGAACGGGGGACA 15 V_HOXD8_01_M01432 TRANSFAC + 34144629 34144645 2.0E-06 TTGGTAATTACTAGTTA 17 V_HOXA7_03_M01394 TRANSFAC - 34144627 34144642 5.0E-06 CTAGTAATTACCAATA 16 V_HOXA7_03_M01394 TRANSFAC + 34144629 34144644 7.0E-06 TTGGTAATTACTAGTT 16 V_SP1_Q2_01_M00933 TRANSFAC - 34143569 34143578 4.0E-06 CCCCGCCCCC 10 V_BARX1_01_M01340 TRANSFAC - 34144627 34144642 3.0E-06 CTAGTAATTACCAATA 16 V_DMRT1_01_M01146 TRANSFAC + 34144794 34144808 0.0E+00 ATGATACAATGTTAC 15 V_DMRT1_01_M01146 TRANSFAC - 34144796 34144810 1.0E-06 AGGTAACATTGTATC 15 V_GLIS2_04_M02863 TRANSFAC - 34144647 34144660 8.0E-06 AGTATTACTCAAGA 14 V_HOXC8_01_M01321 TRANSFAC + 34144627 34144642 3.0E-06 TATTGGTAATTACTAG 16 V_PPARG_01_M00512 TRANSFAC - 34144600 34144620 4.0E-06 CCTCAGGTCAAAGTTTGGAGA 21 V_IPF1_06_M01438 TRANSFAC - 34144627 34144642 7.0E-06 CTAGTAATTACCAATA 16 V_IPF1_06_M01438 TRANSFAC + 34144629 34144644 8.0E-06 TTGGTAATTACTAGTT 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.