Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

GRHPR Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9380 glyoxylate reductase/hydroxypyruvate reductase chr9 + 37417706 - 37423206 37422706 Transcription Factor Binding Sites   Download all TFBS in the GRHPR promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 37418347 37418364 9.0E-06 ACATCAAACATTGACAAA 18 EOMES_TBX_DBD_dimeric_20_1 SELEX + 37418277 37418296 3.0E-06 TAACACATTAATAAGTGTCT 20 EOMES_TBX_DBD_dimeric_20_1 SELEX - 37418277 37418296 1.0E-06 AGACACTTATTAATGTGTTA 20 SP8_C2H2_DBD_monomeric_12_1 SELEX + 37422620 37422631 8.0E-06 GCCACACCCCCT 12 SP3_C2H2_DBD_monomeric_11_1 SELEX + 37422620 37422630 7.0E-06 GCCACACCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 37422620 37422630 4.0E-06 GCCACACCCCC 11 SOX2_HMG_full_dimeric_17_1 SELEX - 37418465 37418481 1.0E-05 GCCCAATGCCCTTGTTT 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 37418453 37418469 6.0E-06 ACACACAAGTACAAACA 17 SRY_HMG_DBD_dimeric_13_2 SELEX - 37418168 37418180 7.0E-06 TGAATATCATACC 13 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 37418459 37418475 2.0E-06 AAGTACAAACAAGGGCA 17 HNF1B_MA0153.1 JASPAR - 37418349 37418360 5.0E-06 TCAATGTTTGAT 12 RORA_nuclearreceptor_DBD_dimeric_19_1 SELEX + 37418311 37418329 1.0E-05 TATCTGTGTTCCCAGGCCA 19 POU6F2_POU_DBD_dimeric_16_1 SELEX + 37418272 37418287 2.0E-06 TTAAGTAACACATTAA 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 37418272 37418287 1.0E-06 TTAATGTGTTACTTAA 16 ZNF740_C2H2_full_monomeric_10_1 SELEX + 37422514 37422523 5.0E-06 ACCCCCCCAC 10 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 37418420 37418433 5.0E-06 ATTAACAGAGAACA 14 OTX2_homeodomain_DBD_monomeric_8_1 SELEX + 37418429 37418436 7.0E-06 TTAATCCT 8 SOX14_HMG_DBD_dimeric_13_1 SELEX - 37422549 37422561 8.0E-06 ACAGTAACAGTGA 13 SP1_C2H2_DBD_monomeric_11_1 SELEX + 37422620 37422630 8.0E-06 GCCACACCCCC 11 RFX5_RFX_DBD_dimeric_16_3 SELEX + 37420462 37420477 6.0E-06 TGTTCCCAAAGAAACA 16 PITX1_homeodomain_full_monomeric_9_1 SELEX + 37418428 37418436 9.0E-06 GTTAATCCT 9 ETS1_ETS_full_dimeric_18_1 SELEX + 37425343 37425360 0.0E+00 GCAGGATGTCTTTCCTCA 18 Zfp740_C2H2_DBD_monomeric_10_1 SELEX + 37422514 37422523 2.0E-06 ACCCCCCCAC 10 RREB1_MA0073.1 JASPAR + 37422513 37422532 1.0E-06 CACCCCCCCACACACACACA 20 RREB1_MA0073.1 JASPAR + 37422515 37422534 2.0E-06 CCCCCCCACACACACACAAG 20 RREB1_MA0073.1 JASPAR + 37422517 37422536 7.0E-06 CCCCCACACACACACAAGGA 20 V_FOXP1_01_M00987 TRANSFAC - 37418451 37418470 0.0E+00 TTGTTTGTACTTGTGTGTAG 20 V_DBX1_01_M01483 TRANSFAC + 37418277 37418293 4.0E-06 TAACACATTAATAAGTG 17 V_GEN_INI_B_M00315 TRANSFAC - 37418155 37418162 1.0E-05 CCTCATTT 8 V_E2F4_Q6_M02090 TRANSFAC - 37422651 37422660 1.0E-05 GCGGGAGAGA 10 V_OSF2_Q6_M00731 TRANSFAC - 37425521 37425528 1.0E-05 ACCACAAA 8 V_NF1_Q6_01_M00806 TRANSFAC + 37425322 37425338 9.0E-06 CTAGCTCAGTGCCAAGC 17 V_NF1A_Q6_M02103 TRANSFAC + 37425322 37425337 7.0E-06 CTAGCTCAGTGCCAAG 16 V_ETS_B_M00340 TRANSFAC + 37425342 37425355 1.0E-05 AGCAGGATGTCTTT 14 V_EBOX_Q6_01_M01034 TRANSFAC - 37422176 37422185 6.0E-06 CCACCTGACT 10 V_SP1_Q6_01_M00931 TRANSFAC - 37422674 37422683 4.0E-06 GGGGCGGGGC 10 V_AP2_Q6_01_M00915 TRANSFAC + 37418378 37418390 1.0E-05 CTGTCCCCAGGCC 13 V_TR4_Q2_M01725 TRANSFAC + 37422290 37422300 6.0E-06 CGTGACCTCTC 11 V_ZFP281_05_M02935 TRANSFAC - 37422368 37422384 8.0E-06 TGAAAGCCCCCACTTTT 17 V_HNF1_C_M00206 TRANSFAC + 37422132 37422148 8.0E-06 AGCCAGTGATTCTCCTA 17 V_GC_01_M00255 TRANSFAC - 37422618 37422631 7.0E-06 AGGGGGTGTGGCTT 14 V_GEN_INI3_B_M00314 TRANSFAC - 37418155 37418162 1.0E-05 CCTCATTT 8 V_NKX61_01_M00424 TRANSFAC - 37418278 37418290 3.0E-06 TTATTAATGTGTT 13 V_HNF1B_04_M02266 TRANSFAC - 37418349 37418360 5.0E-06 TCAATGTTTGAT 12 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 37418459 37418469 9.0E-06 TGTTTGTACTT 11 V_SFPI1_04_M02896 TRANSFAC + 37418154 37418167 1.0E-05 CAAATGAGGGAACT 14 V_PPARG_03_M00528 TRANSFAC + 37418466 37418482 9.0E-06 AACAAGGGCATTGGGCA 17 V_PEBP_Q6_M00984 TRANSFAC - 37425518 37425532 2.0E-06 GGACACCACAAAGCT 15 V_RREB1_01_M00257 TRANSFAC + 37422518 37422531 4.0E-06 CCCCACACACACAC 14 V_NCX_02_M01420 TRANSFAC + 37418277 37418293 8.0E-06 TAACACATTAATAAGTG 17 V_LMO2COM_01_M00277 TRANSFAC - 37420450 37420461 6.0E-06 GGCCAGGTGCAG 12 V_ZFP691_04_M02937 TRANSFAC - 37422934 37422950 4.0E-06 TCCGAGACTCCCCAAAA 17 V_TFIII_Q6_M00706 TRANSFAC - 37418262 37418270 6.0E-06 AGAGGGAGG 9 V_GLI3_01_M01596 TRANSFAC + 37424386 37424396 9.0E-06 TTGGGTGGCCT 11 V_SP4_Q5_M01273 TRANSFAC + 37422674 37422684 2.0E-06 GCCCCGCCCCG 11 V_GCNF_01_M00526 TRANSFAC - 37424389 37424406 3.0E-06 GATAAGGTCAAGGCCACC 18 V_IPF1_05_M01255 TRANSFAC + 37418279 37418290 1.0E-06 ACACATTAATAA 12 V_ERR1_Q2_M00511 TRANSFAC - 37425265 37425278 9.0E-06 TGCTGGAGGTCACA 14 V_GEN_INI2_B_M00313 TRANSFAC - 37418155 37418162 1.0E-05 CCTCATTT 8 V_DMRT7_01_M01151 TRANSFAC + 37425415 37425428 1.0E-06 TTGTGACAGTTTTG 14 V_FPM315_01_M01587 TRANSFAC + 37422855 37422866 4.0E-06 GAGGGAGCAGGG 12 V_PBX1_03_M01017 TRANSFAC + 37418347 37418358 2.0E-06 ACATCAAACATT 12 V_NFAT2_02_M01749 TRANSFAC + 37424311 37424321 8.0E-06 TTCCATGGCAA 11 V_MEF3_B_M00319 TRANSFAC - 37418487 37418499 1.0E-05 TGGACAGGTTTCT 13 V_SRF_02_M01257 TRANSFAC + 37418151 37418168 9.0E-06 GCCCAAATGAGGGAACTG 18 V_PPARG_02_M00515 TRANSFAC - 37422766 37422788 8.0E-06 CTGCGGGTGACGAACACCTTCAT 23 V_BRN3C_01_M01408 TRANSFAC - 37418277 37418292 2.0E-06 ACTTATTAATGTGTTA 16 V_MAFK_04_M02880 TRANSFAC - 37422158 37422172 5.0E-06 GCTAAAACTGCAAGA 15 V_IPF1_04_M01236 TRANSFAC + 37418282 37418291 2.0E-06 CATTAATAAG 10 V_P300_01_M00033 TRANSFAC - 37422558 37422571 7.0E-06 TCGGGGAGTGACAG 14 V_PBX1_04_M01357 TRANSFAC + 37418343 37418359 6.0E-06 AAACACATCAAACATTG 17 V_SEF1_C_M00214 TRANSFAC - 37425360 37425378 5.0E-06 GAGACCCGTGGCTGCGGTT 19 V_DMRT5_01_M01150 TRANSFAC + 37425413 37425427 6.0E-06 TGTTGTGACAGTTTT 15 V_SPIB_03_M02076 TRANSFAC - 37422312 37422321 7.0E-06 TGAGGAAGTC 10 V_ER_Q6_M00191 TRANSFAC - 37422544 37422562 9.0E-06 GACAGTAACAGTGACCCTA 19 V_ER_Q6_M00191 TRANSFAC + 37424386 37424404 1.0E-05 TTGGGTGGCCTTGACCTTA 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.