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SDR42E1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
93517 short chain dehydrogenase/reductase family 42E, member 1 chr16 -82044593 - 82050093 82045093

Transcription Factor Binding Sites

 
Download all TFBS in the SDR42E1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
GABPA_MA0062.2 JASPAR - 82045104 82045114 0.0E+00 CCGGAAGTGGC 11
MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 82040965 82040982 1.0E-06 CCACTTATTAAGCACTTA 18
BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 82040966 82040982 1.0E-06 CACTTATTAAGCACTTA 17
Pax4_MA0068.1 JASPAR + 82049852 82049881 3.0E-06 AAAAATGATGCACAAACCCATTAATACTTC 30
Foxq1_MA0040.1 JASPAR + 82050036 82050046 9.0E-06 AGTAGTTTATT 11
XBP1_bZIP_DBD_dimeric_14_1 SELEX + 82045323 82045336 7.0E-06 AGGGCCACGTCAAC 14
Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 82040965 82040982 2.0E-06 CCACTTATTAAGCACTTA 18
EN1_homeodomain_full_dimeric_14_1 SELEX - 82040969 82040982 1.0E-06 TAAGTGCTTAATAA 14
SPDEF_ETS_full_putative-multimer_16_1 SELEX - 82049873 82049888 9.0E-06 CAAGAAGGAAGTATTA 16
GBX2_homeodomain_DBD_dimeric_14_1 SELEX + 82040969 82040982 2.0E-06 TTATTAAGCACTTA 14
GBX2_homeodomain_DBD_dimeric_14_1 SELEX - 82040969 82040982 3.0E-06 TAAGTGCTTAATAA 14
MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 82040965 82040982 2.0E-06 CCACTTATTAAGCACTTA 18
ELF5_MA0136.1 JASPAR + 82049876 82049884 4.0E-06 TACTTCCTT 9
V_TEL1_02_M02070 TRANSFAC - 82045106 82045115 5.0E-06 CCCGGAAGTG 10
V_FOXP3_Q4_M00992 TRANSFAC - 82050000 82050016 4.0E-06 AAAGGTCTGTTTCTGGC 17
V_PAX4_03_M00378 TRANSFAC - 82050077 82050088 7.0E-06 CATCTCCACCCC 12
V_NERF_01_M01976 TRANSFAC - 82045106 82045115 9.0E-06 CCCGGAAGTG 10
V_STAT_Q6_M00777 TRANSFAC - 82049923 82049935 8.0E-06 GACTATTCTGAGA 13
V_STAT_Q6_M00777 TRANSFAC - 82050057 82050069 5.0E-06 GTAGTTTCTGGGA 13
V_ISL2_01_M01328 TRANSFAC + 82049863 82049878 0.0E+00 ACAAACCCATTAATAC 16
V_IRF_Q6_01_M00972 TRANSFAC - 82049989 82049999 6.0E-06 AGAACTGAAAC 11
V_IRF2_Q6_M01882 TRANSFAC - 82049986 82050001 3.0E-06 GCAGAACTGAAACTAA 16
V_IRF3_05_M02767 TRANSFAC - 82049987 82050000 7.0E-06 CAGAACTGAAACTA 14
V_NKX24_01_M01350 TRANSFAC - 82050029 82050044 5.0E-06 TAAACTACTTGTCCTT 16
V_AP4_Q6_02_M01860 TRANSFAC + 82044990 82045002 8.0E-06 ACAGCTGCAGGAA 13
V_ELF2_02_M02054 TRANSFAC - 82045106 82045115 8.0E-06 CCCGGAAGTG 10
V_ELF4_04_M02850 TRANSFAC - 82050037 82050053 1.0E-06 CCTCCAAAATAAACTAC 17
V_POU3F2_01_M00463 TRANSFAC - 82047050 82047063 6.0E-06 TGACATATATTCAT 14
V_NKX26_01_M01322 TRANSFAC - 82050029 82050044 5.0E-06 TAAACTACTTGTCCTT 16
V_POLY_C_M00212 TRANSFAC + 82049870 82049887 4.0E-06 CATTAATACTTCCTTCTT 18
V_NKX61_01_M00424 TRANSFAC - 82049866 82049878 6.0E-06 GTATTAATGGGTT 13
V_E12_Q6_M00693 TRANSFAC - 82044906 82044916 8.0E-06 GACAGGTGGCG 11
V_HOXA3_07_M02869 TRANSFAC + 82049864 82049877 9.0E-06 CAAACCCATTAATA 14
V_RXRA_04_M02895 TRANSFAC + 82050033 82050048 7.0E-06 ACAAGTAGTTTATTTT 16
V_IRF_Q6_M00772 TRANSFAC + 82049985 82049999 0.0E+00 CTTAGTTTCAGTTCT 15
V_ISRE_01_M00258 TRANSFAC + 82049987 82050001 1.0E-06 TAGTTTCAGTTCTGC 15
V_ELF5_01_M01197 TRANSFAC - 82049876 82049886 7.0E-06 AGAAGGAAGTA 11
V_GADP_01_M01258 TRANSFAC + 82045106 82045117 3.0E-06 CACTTCCGGGCC 12
V_HFH1_01_M00129 TRANSFAC + 82050036 82050047 5.0E-06 AGTAGTTTATTT 12
V_ISGF3G_03_M02771 TRANSFAC - 82049986 82050000 1.0E-06 CAGAACTGAAACTAA 15
V_TEL1_01_M01993 TRANSFAC - 82045106 82045115 5.0E-06 CCCGGAAGTG 10
V_NKX63_01_M01470 TRANSFAC - 82049864 82049880 7.0E-06 AAGTATTAATGGGTTTG 17
V_ELF4_01_M01979 TRANSFAC - 82045106 82045115 4.0E-06 CCCGGAAGTG 10
V_NKX23_01_M01457 TRANSFAC + 82040970 82040985 3.0E-06 TATTAAGCACTTACTC 16
V_ICSBP_Q6_M00699 TRANSFAC - 82049987 82049998 1.0E-06 GAACTGAAACTA 12
V_MYOD_01_M00001 TRANSFAC - 82044906 82044917 5.0E-06 CGACAGGTGGCG 12
V_ZFP187_04_M02934 TRANSFAC - 82044996 82045011 4.0E-06 GCGCCCTTGTTCCTGC 16
V_IRF5_03_M02769 TRANSFAC - 82049986 82050000 8.0E-06 CAGAACTGAAACTAA 15
V_MYOD_Q6_01_M00929 TRANSFAC - 82044903 82044920 3.0E-06 ACGCGACAGGTGGCGGTC 18
V_NKX3A_02_M01383 TRANSFAC - 82040969 82040985 2.0E-06 GAGTAAGTGCTTAATAA 17
V_NKX22_01_M00485 TRANSFAC + 82050033 82050042 7.0E-06 ACAAGTAGTT 10
V_E47_01_M00002 TRANSFAC + 82045154 82045168 6.0E-06 CGCGCAGGTGTCTCC 15
V_IRF1_Q6_01_M01881 TRANSFAC + 82049987 82050000 7.0E-06 TAGTTTCAGTTCTG 14
V_PBX_Q3_M00998 TRANSFAC + 82049913 82049924 5.0E-06 GATTGATGTGTC 12
V_ELF_02_M02053 TRANSFAC - 82045106 82045115 1.0E-05 CCCGGAAGTG 10
V_ELF5_04_M02241 TRANSFAC + 82049876 82049884 4.0E-06 TACTTCCTT 9
V_BRN3C_01_M01408 TRANSFAC - 82049865 82049880 8.0E-06 AAGTATTAATGGGTTT 16
V_PAX4_04_M00380 TRANSFAC + 82049852 82049881 2.0E-06 AAAAATGATGCACAAACCCATTAATACTTC 30
V_PAX2_02_M00486 TRANSFAC - 82050038 82050046 8.0E-06 AATAAACTA 9
V_NKX21_01_M01312 TRANSFAC - 82050029 82050044 4.0E-06 TAAACTACTTGTCCTT 16
V_HSF1_Q6_01_M02017 TRANSFAC - 82050056 82050069 2.0E-06 GTAGTTTCTGGGAT 14
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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