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CRLF1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9244 cytokine receptor-like factor 1 chr19 - 18717160 - 18722660 18717660 Transcription Factor Binding Sites   Download all TFBS in the CRLF1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 18720671 18720688 2.0E-06 CTGGCAAATATTGACCCA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 18720671 18720688 7.0E-06 TGGGTCAATATTTGCCAG 18 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 18718047 18718057 1.0E-05 GCCCCGCCCCC 11 Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 18720603 18720615 0.0E+00 GTAAAGGGTTAAA 13 ESRRG_nuclearreceptor_full_dimeric_17_1 SELEX + 18714415 18714431 1.0E-06 GATGGCAGCCAAGGACA 17 EWSR1-FLI1_MA0149.1 JASPAR - 18722055 18722072 8.0E-06 GGAGAGAAGCAAAGAAAA 18 ERG_ETS_full_dimeric_14_1 SELEX - 18721712 18721725 3.0E-06 TCAGGAAATCCGCC 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 18720673 18720686 8.0E-06 GGCAAATATTGACC 14 NR2F1_MA0017.1 JASPAR - 18722012 18722025 2.0E-06 TGACCTTTGGGCAT 14 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 18720673 18720686 6.0E-06 GGCAAATATTGACC 14 ZNF740_C2H2_full_monomeric_10_1 SELEX + 18718053 18718062 3.0E-06 CCCCCCCCAC 10 ZNF740_C2H2_full_monomeric_10_1 SELEX - 18721650 18721659 3.0E-06 CCCCCCCCAC 10 SP1_MA0079.2 JASPAR + 18718048 18718057 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 18722491 18722500 3.0E-06 CCCCTCCCCC 10 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX - 18714176 18714189 9.0E-06 TAATGTCACAGCTA 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 18720673 18720686 2.0E-06 GGCAAATATTGACC 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 18720673 18720686 4.0E-06 GGTCAATATTTGCC 14 SP4_C2H2_full_monomeric_17_1 SELEX + 18718044 18718060 1.0E-06 CTGGCCCCGCCCCCCCC 17 MZF1_5-13_MA0057.1 JASPAR + 18715099 18715108 1.0E-06 GTAGGGGGAA 10 Mycn_MA0104.2 JASPAR - 18722555 18722564 8.0E-06 CCCACGTGGC 10 INSM1_MA0155.1 JASPAR - 18721617 18721628 1.0E-05 TGGCTGGGGGCG 12 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 18721680 18721694 2.0E-06 TAAGAGGGAAAGTTG 15 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 18720673 18720686 3.0E-06 GGCAAATATTGACC 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 18720673 18720686 6.0E-06 GGTCAATATTTGCC 14 Nkx3-2_MA0122.1 JASPAR + 18719374 18719382 2.0E-06 TTAAGTGGA 9 FEV_MA0156.1 JASPAR - 18721717 18721724 1.0E-05 CAGGAAAT 8 Zfp740_C2H2_DBD_monomeric_10_1 SELEX + 18718053 18718062 5.0E-06 CCCCCCCCAC 10 Zfp740_C2H2_DBD_monomeric_10_1 SELEX - 18721650 18721659 5.0E-06 CCCCCCCCAC 10 TP53_MA0106.1 JASPAR + 18714195 18714214 9.0E-06 CAGAGCATGTCCAGGCAGTG 20 FLI1_ETS_full_monomeric_14_1 SELEX - 18721712 18721725 4.0E-06 TCAGGAAATCCGCC 14 RREB1_MA0073.1 JASPAR + 18717807 18717826 7.0E-06 CCCTAACTCAACCCCTACCG 20 V_MTF1_01_M01242 TRANSFAC - 18721190 18721209 5.0E-06 GTGTGCATTACACTGAGCAC 20 V_KLF15_Q2_M01714 TRANSFAC - 18720612 18720625 7.0E-06 GAACTGGGGAGTAA 14 V_FLI1_Q6_M01208 TRANSFAC - 18712877 18712887 9.0E-06 CAGGAAGTCCT 11 V_ZFP410_04_M02936 TRANSFAC - 18720713 18720729 7.0E-06 TCCTTCTGCCCCTTACA 17 V_ZFP410_04_M02936 TRANSFAC + 18721750 18721766 9.0E-06 CCCTCCCGCCCCTCACC 17 V_SREBP2_Q6_M01177 TRANSFAC + 18722020 18722031 8.0E-06 AGGTCACCTCCC 12 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC - 18720671 18720682 2.0E-06 AATATTTGCCAG 12 V_LMAF_Q2_M01139 TRANSFAC + 18721476 18721484 6.0E-06 GGTCAGCAG 9 V_SP1_Q6_01_M00931 TRANSFAC - 18718047 18718056 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 18722481 18722490 4.0E-06 GGGGCGGGGC 10 V_NR2F2_03_M02783 TRANSFAC + 18722014 18722029 3.0E-06 GCCCAAAGGTCACCTC 16 V_ZFP740_03_M02834 TRANSFAC - 18721647 18721662 0.0E+00 CCCCCCCCCCCACTTC 16 V_ZFP740_03_M02834 TRANSFAC - 18721649 18721664 8.0E-06 CGCCCCCCCCCCCACT 16 V_GCNF_Q3_M02009 TRANSFAC - 18721534 18721543 9.0E-06 CGAGGTCAAG 10 V_OCT1_01_M00135 TRANSFAC - 18722238 18722256 6.0E-06 CCACACATGCTAATTCCAG 19 V_AP2_Q6_01_M00915 TRANSFAC - 18716928 18716940 9.0E-06 GCCCCCCCAGGCG 13 V_SP1_03_M02281 TRANSFAC + 18718048 18718057 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 18722491 18722500 3.0E-06 CCCCTCCCCC 10 V_COUPTF_Q6_M01036 TRANSFAC - 18720706 18720728 2.0E-06 CCTTCTGCCCCTTACACATTCCC 23 V_COUPTF_Q6_M01036 TRANSFAC - 18722008 18722030 0.0E+00 GGAGGTGACCTTTGGGCATTGCT 23 V_PU1_Q4_M01172 TRANSFAC + 18718613 18718631 7.0E-06 TAGTTTGTCTTCCTTCTTT 19 V_HNF1_C_M00206 TRANSFAC + 18720672 18720688 8.0E-06 TGGCAAATATTGACCCA 17 V_WT1_Q6_01_M02036 TRANSFAC + 18716977 18716986 4.0E-06 CGCCCCCGCC 10 V_ETS_Q4_M00771 TRANSFAC + 18712876 18712887 8.0E-06 AAGGACTTCCTG 12 V_ZNF219_01_M01122 TRANSFAC + 18718051 18718062 3.0E-06 CGCCCCCCCCAC 12 V_ZNF219_01_M01122 TRANSFAC - 18721653 18721664 1.0E-06 CGCCCCCCCCCC 12 V_GC_01_M00255 TRANSFAC + 18722474 18722487 9.0E-06 GAGGGGCGGGGCGG 14 V_COUP_01_M00158 TRANSFAC - 18722012 18722025 2.0E-06 TGACCTTTGGGCAT 14 V_XFD3_01_M00269 TRANSFAC - 18720675 18720688 6.0E-06 TGGGTCAATATTTG 14 V_SP4_03_M02810 TRANSFAC + 18718046 18718062 8.0E-06 GGCCCCGCCCCCCCCAC 17 V_KROX_Q6_M00982 TRANSFAC + 18718049 18718062 7.0E-06 CCCGCCCCCCCCAC 14 V_KROX_Q6_M00982 TRANSFAC - 18721653 18721666 5.0E-06 CTCGCCCCCCCCCC 14 V_KROX_Q6_M00982 TRANSFAC - 18722486 18722499 4.0E-06 CCCTCCCCCGCCCC 14 V_ZBP89_Q4_M01816 TRANSFAC - 18720773 18720782 4.0E-06 CCCTCCCCCA 10 V_ZBP89_Q4_M01816 TRANSFAC + 18721392 18721401 2.0E-06 TCCTCCCCCA 10 V_OLF1_01_M00261 TRANSFAC + 18716841 18716862 5.0E-06 CACAAGTCCCCCGGGACCCCGG 22 V_SP1_Q6_M00196 TRANSFAC - 18718046 18718058 0.0E+00 GGGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC + 18722479 18722491 7.0E-06 GCGGGGCGGGGCG 13 V_MAZ_Q6_01_M02023 TRANSFAC + 18722460 18722473 0.0E+00 ATGGGAGGGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 18722465 18722478 0.0E+00 AGGGGAGGGGAGGG 14 V_SP1SP3_Q4_M01219 TRANSFAC + 18718050 18718060 4.0E-06 CCGCCCCCCCC 11 V_SP1SP3_Q4_M01219 TRANSFAC - 18721652 18721662 7.0E-06 CCCCCCCCCCC 11 V_MUSCLE_INI_B_M00321 TRANSFAC + 18718051 18718071 5.0E-06 CGCCCCCCCCACCGAGCGGTC 21 V_GRE_C_M00205 TRANSFAC - 18712876 18712891 4.0E-06 GGTTCAGGAAGTCCTT 16 V_HNF4A_Q6_01_M02016 TRANSFAC + 18722014 18722028 4.0E-06 GCCCAAAGGTCACCT 15 V_HNF4_DR1_Q3_M00764 TRANSFAC - 18722013 18722025 3.0E-06 TGACCTTTGGGCA 13 V_MYCN_01_M02259 TRANSFAC - 18722555 18722564 8.0E-06 CCCACGTGGC 10 V_BRACH_01_M00150 TRANSFAC + 18714165 18714188 9.0E-06 AGTAAGAGAAGTAGCTGTGACATT 24 V_MZF1_02_M00084 TRANSFAC + 18715096 18715108 6.0E-06 GTTGTAGGGGGAA 13 V_INSM1_01_M02268 TRANSFAC - 18721617 18721628 1.0E-05 TGGCTGGGGGCG 12 V_NKX32_02_M01482 TRANSFAC - 18719370 18719386 7.0E-06 CACCTCCACTTAACCCT 17 V_TFIII_Q6_M00706 TRANSFAC + 18720750 18720758 6.0E-06 AGAGGGAGG 9 V_NEUROD_02_M01288 TRANSFAC - 18721784 18721795 6.0E-06 CTCCTGCTGTTC 12 V_SP4_Q5_M01273 TRANSFAC + 18718047 18718057 1.0E-06 GCCCCGCCCCC 11 V_SP4_Q5_M01273 TRANSFAC - 18722480 18722490 2.0E-06 GCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 18722485 18722495 7.0E-06 CCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 18722491 18722501 5.0E-06 GCCCCTCCCCC 11 V_MAZR_01_M00491 TRANSFAC + 18721653 18721665 6.0E-06 GGGGGGGGGGCGA 13 V_MYF6_04_M02885 TRANSFAC + 18722533 18722547 9.0E-06 AGGCACAGCCGCGCC 15 V_TAL1_01_M01591 TRANSFAC + 18722060 18722072 2.0E-06 TTTGCTTCTCTCC 13 V_DR1_Q3_M00762 TRANSFAC + 18722013 18722025 5.0E-06 TGCCCAAAGGTCA 13 V_T3R_Q6_M00963 TRANSFAC - 18714425 18714433 7.0E-06 CCTGTCCTT 9 V_PLAG1_01_M01778 TRANSFAC + 18720718 18720733 9.0E-06 GGGGCAGAAGGAGGGA 16 V_FPM315_01_M01587 TRANSFAC - 18721389 18721400 3.0E-06 GGGGGAGGACGG 12 V_FPM315_01_M01587 TRANSFAC - 18721440 18721451 6.0E-06 CAGGGAGGAGGC 12 V_FPM315_01_M01587 TRANSFAC - 18721986 18721997 1.0E-06 CAGGGAGGAGGG 12 V_STAT6_02_M00500 TRANSFAC + 18721716 18721723 1.0E-05 GATTTCCT 8 V_T3RBETA_Q6_01_M02119 TRANSFAC + 18714416 18714432 5.0E-06 ATGGCAGCCAAGGACAG 17 V_ZFP281_01_M01597 TRANSFAC + 18720773 18720783 9.0E-06 TGGGGGAGGGA 11 V_ZFP281_01_M01597 TRANSFAC + 18722490 18722500 7.0E-06 CGGGGGAGGGG 11 V_MEF3_B_M00319 TRANSFAC - 18721723 18721735 5.0E-06 GGGTCGGGTTTCA 13 V_MEF3_B_M00319 TRANSFAC - 18722656 18722668 0.0E+00 GGCTCAGGTTTCG 5 V_RARA_03_M02787 TRANSFAC + 18722014 18722029 1.0E-06 GCCCAAAGGTCACCTC 16 V_ZFP281_04_M02831 TRANSFAC - 18721649 18721663 7.0E-06 GCCCCCCCCCCCACT 15 V_ZFP281_04_M02831 TRANSFAC - 18721650 18721664 5.0E-06 CGCCCCCCCCCCCAC 15 V_ZFP281_04_M02831 TRANSFAC - 18721651 18721665 6.0E-06 TCGCCCCCCCCCCCA 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 18722055 18722072 8.0E-06 GGAGAGAAGCAAAGAAAA 18 V_DR3_Q4_M00966 TRANSFAC + 18712875 18712895 0.0E+00 AAAGGACTTCCTGAACCAGGT 21 V_SP1_Q2_01_M00933 TRANSFAC + 18718048 18718057 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC + 18722488 18722501 0.0E+00 GGCGGGGGAGGGGC 14 V_SP1_Q4_01_M00932 TRANSFAC - 18718046 18718058 1.0E-06 GGGGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC + 18722490 18722502 8.0E-06 CGGGGGAGGGGCC 13 V_FEV_01_M02269 TRANSFAC - 18721717 18721724 1.0E-05 CAGGAAAT 8 V_COUP_DR1_Q6_M00765 TRANSFAC - 18722013 18722025 3.0E-06 TGACCTTTGGGCA 13 V_AP2_Q3_M00800 TRANSFAC - 18716923 18716938 1.0E-06 CCCCCCAGGCGGAGGG 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.