Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CD5L Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 922 CD5 molecule-like chr1 - 157811134 - 157816634 157811634 Transcription Factor Binding Sites   Download all TFBS in the CD5L promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 157813008 157813023 3.0E-06 TTGAATAAGTAATGCT 16 SOX10_HMG_full_dimeric_14_1 SELEX + 157812986 157812999 7.0E-06 TGCATATGCAGACA 14 POU2F1_POU_DBD_dimeric_14_1 SELEX + 157812984 157812997 1.0E-06 TATGCATATGCAGA 14 POU2F1_POU_DBD_dimeric_14_1 SELEX - 157812984 157812997 0.0E+00 TCTGCATATGCATA 14 SOX8_HMG_DBD_dimeric_14_1 SELEX + 157812986 157812999 3.0E-06 TGCATATGCAGACA 14 POU3F4_POU_DBD_monomeric_9_1 SELEX + 157812984 157812992 8.0E-06 TATGCATAT 9 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 157812984 157812992 8.0E-06 TATGCATAT 9 POU4F3_POU_DBD_monomeric_16_1 SELEX - 157813008 157813023 1.0E-06 TTGAATAAGTAATGCT 16 Pou2f2_POU_DBD_dimeric_14_1 SELEX + 157812984 157812997 0.0E+00 TATGCATATGCAGA 14 Pou2f2_POU_DBD_dimeric_14_1 SELEX - 157812984 157812997 0.0E+00 TCTGCATATGCATA 14 POU2F3_POU_DBD_dimeric_12_1 SELEX + 157812985 157812996 3.0E-06 ATGCATATGCAG 12 POU2F3_POU_DBD_dimeric_12_1 SELEX - 157812985 157812996 6.0E-06 CTGCATATGCAT 12 POU2F3_POU_DBD_dimeric_12_1 SELEX - 157813012 157813023 2.0E-06 TTGAATAAGTAA 12 SOX9_HMG_full_dimeric_16_3 SELEX + 157812985 157813000 2.0E-06 ATGCATATGCAGACAA 16 POU1F1_POU_DBD_monomeric_17_1 SELEX - 157813010 157813026 0.0E+00 TCCTTGAATAAGTAATG 17 Nkx3-2_MA0122.1 JASPAR + 157812950 157812958 2.0E-06 TTAAGTGGA 9 POU5F1P1_POU_DBD_monomeric_12_1 SELEX + 157812985 157812996 2.0E-06 ATGCATATGCAG 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 157812985 157812996 3.0E-06 CTGCATATGCAT 12 POU5F1P1_POU_DBD_monomeric_12_1 SELEX - 157813012 157813023 6.0E-06 TTGAATAAGTAA 12 Pou5f1_MA0142.1 JASPAR + 157812978 157812992 4.0E-06 TTTTGCTATGCATAT 15 POU3F3_POU_DBD_dimeric_12_1 SELEX + 157813012 157813023 1.0E-05 TTACTTATTCAA 12 POU3F3_POU_DBD_dimeric_12_1 SELEX - 157813012 157813023 2.0E-06 TTGAATAAGTAA 12 POU4F1_POU_DBD_monomeric_14_1 SELEX - 157813010 157813023 1.0E-06 TTGAATAAGTAATG 14 V_NF1_Q6_01_M00806 TRANSFAC + 157808922 157808938 4.0E-06 TTGGATGCTGGCCAAGT 17 V_EVI1_04_M00081 TRANSFAC + 157812965 157812979 1.0E-06 GAATAGGAAAAGATT 15 V_POU5F1_02_M02245 TRANSFAC + 157812978 157812992 4.0E-06 TTTTGCTATGCATAT 15 V_OCT2_02_M01761 TRANSFAC + 157812986 157812995 5.0E-06 TGCATATGCA 10 V_OCT2_02_M01761 TRANSFAC - 157812986 157812995 5.0E-06 TGCATATGCA 10 V_HELIOSA_02_M01004 TRANSFAC + 157812966 157812976 9.0E-06 AATAGGAAAAG 11 V_OCT1_02_M00136 TRANSFAC + 157812985 157812999 4.0E-06 ATGCATATGCAGACA 15 V_NKX31_02_M02782 TRANSFAC - 157812946 157812962 1.0E-06 ATTCTCCACTTAACTCA 17 V_OCT1_04_M00138 TRANSFAC + 157812977 157812999 3.0E-06 ATTTTGCTATGCATATGCAGACA 23 V_OCAB_Q6_M02113 TRANSFAC - 157812982 157812992 4.0E-06 ATATGCATAGC 11 V_NKX32_02_M01482 TRANSFAC - 157812946 157812962 2.0E-06 ATTCTCCACTTAACTCA 17 V_ELF1_Q6_M00746 TRANSFAC + 157812964 157812975 7.0E-06 AGAATAGGAAAA 12 V_NRF2_Q4_M00821 TRANSFAC - 157813000 157813012 1.0E-05 ATGCTGTTTCACT 13 V_NF1_Q6_M00193 TRANSFAC - 157808921 157808938 1.0E-06 ACTTGGCCAGCATCCAAG 18 V_OCT4_01_M01125 TRANSFAC + 157812978 157812992 5.0E-06 TTTTGCTATGCATAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.