Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CD3E Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 916 CD3e molecule, epsilon (CD3-TCR complex) chr11 + 118170294 - 118175794 118175294 Transcription Factor Binding Sites   Download all TFBS in the CD3E promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX - 118176703 118176718 5.0E-06 CTGCATTTTTAACAAG 16 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 118175185 118175202 9.0E-06 CATATTGTATTACAATTA 18 SOX10_HMG_full_dimeric_14_1 SELEX + 118176675 118176688 4.0E-06 TGAATGTGCACACA 14 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 118175260 118175270 8.0E-06 GCTAAATGTCA 11 NR2E1_nuclearreceptor_full_monomeric_9_1 SELEX + 118175580 118175588 8.0E-06 AAAAGTCAT 9 IRX2_homeodomain_DBD_dimeric_12_1 SELEX - 118175264 118175275 2.0E-06 ATACATGACATT 12 GRHL1_CP2_full_dimeric_12_1 SELEX - 118176464 118176475 8.0E-06 AAAACAAGTTAT 12 SOX9_HMG_DBD_monomeric_9_1 SELEX + 118175538 118175546 9.0E-06 GAACAATGG 9 SOX8_HMG_DBD_dimeric_14_1 SELEX + 118176675 118176688 4.0E-06 TGAATGTGCACACA 14 Pax4_MA0068.1 JASPAR + 118176453 118176482 2.0E-06 AAAAAAGTTAAATAACTTGTTTTAAACCAC 30 POU4F3_POU_DBD_monomeric_16_1 SELEX - 118176703 118176718 5.0E-06 CTGCATTTTTAACAAG 16 Ar_MA0007.1 JASPAR - 118175822 118175843 1.0E-06 CATAGCACAAACAGTTCCTTAC 22 Lhx3_MA0135.1 JASPAR - 118176454 118176466 9.0E-06 TATTTAACTTTTT 13 YY2_C2H2_full_monomeric_11_1 SELEX + 118175629 118175639 2.0E-06 TCCGCCATCTT 11 Gata1_MA0035.2 JASPAR - 118175555 118175565 1.0E-06 AGAGATAAGGA 11 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 118175185 118175202 7.0E-06 CATATTGTATTACAATTA 18 POU1F1_POU_DBD_monomeric_17_1 SELEX + 118175267 118175283 7.0E-06 GTCATGTATTTTTCATG 17 Stat3_MA0144.1 JASPAR + 118175321 118175330 7.0E-06 TTCTAGGAAG 10 NR3C1_MA0113.1 JASPAR - 118176512 118176529 6.0E-06 GAGTACAAACAGTCCTGG 18 SOX9_MA0077.1 JASPAR + 118175538 118175546 5.0E-06 GAACAATGG 9 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 118175185 118175202 7.0E-06 CATATTGTATTACAATTA 18 IRX5_homeodomain_DBD_dimeric_12_1 SELEX - 118175264 118175275 1.0E-06 ATACATGACATT 12 V_FOXP1_01_M00987 TRANSFAC + 118175585 118175604 4.0E-06 TCATCTGTTTTGCTTTTTTT 20 V_CEBPG_Q6_M00622 TRANSFAC + 118176571 118176583 1.0E-06 TTTATTTCAAAGA 13 V_ZSCAN4_03_M02838 TRANSFAC - 118176674 118176690 1.0E-06 TTTGTGTGCACATTCAA 17 V_ZSCAN4_03_M02838 TRANSFAC + 118176675 118176691 0.0E+00 TGAATGTGCACACAAAT 17 V_GEN_INI_B_M00315 TRANSFAC + 118175807 118175814 1.0E-05 CCTCATTT 8 V_BCL6_Q3_01_M02085 TRANSFAC - 118175321 118175330 2.0E-06 CTTCCTAGAA 10 V_GATA1_Q6_M02004 TRANSFAC - 118175554 118175568 3.0E-06 GCTAGAGATAAGGAC 15 V_GATA2_02_M00348 TRANSFAC - 118175556 118175565 7.0E-06 AGAGATAAGG 10 TAL1_TCF3_MA0091.1 JASPAR - 118175566 118175577 8.0E-06 AAAACATCTGCT 12 V_YY1_02_M00069 TRANSFAC - 118176546 118176565 8.0E-06 CACGAGCCATTTTGCCTCAT 20 V_BCL6_01_M01183 TRANSFAC - 118176456 118176471 9.0E-06 CAAGTTATTTAACTTT 16 V_GM397_03_M02760 TRANSFAC - 118176674 118176690 2.0E-06 TTTGTGTGCACATTCAA 17 V_GM397_03_M02760 TRANSFAC + 118176675 118176691 0.0E+00 TGAATGTGCACACAAAT 17 V_HOXA13_02_M01297 TRANSFAC - 118176569 118176577 1.0E-06 AAATAAAAC 9 V_AP4_Q6_M00176 TRANSFAC + 118176599 118176608 2.0E-06 CACAGCTGGT 10 V_SOX21_03_M02803 TRANSFAC + 118175189 118175204 7.0E-06 TTGTATTACAATTACT 16 V_BRN2_01_M00145 TRANSFAC - 118175270 118175285 2.0E-06 GCCATGAAAAATACAT 16 V_NR3C1_01_M02219 TRANSFAC - 118176512 118176529 6.0E-06 GAGTACAAACAGTCCTGG 18 V_TCFAP2E_04_M02926 TRANSFAC - 118175597 118175610 1.0E-06 TTCTGGAAAAAAAG 14 V_CEBPB_01_M00109 TRANSFAC + 118175571 118175584 9.0E-06 ATGTTTTGAAAAAG 14 V_CEBPB_01_M00109 TRANSFAC + 118176433 118176446 3.0E-06 AGATTAAGAAATTG 14 V_REX1_01_M01695 TRANSFAC - 118176531 118176540 4.0E-06 GCAGCCATTT 10 V_SOX7_03_M02807 TRANSFAC - 118175179 118175200 5.0E-06 ATTGTAATACAATATGCCTCCA 22 V_SOX7_03_M02807 TRANSFAC + 118175188 118175209 1.0E-06 ATTGTATTACAATTACTTTTAA 22 V_GEN_INI3_B_M00314 TRANSFAC + 118175807 118175814 1.0E-05 CCTCATTT 8 V_CEBPD_Q6_M00621 TRANSFAC - 118176434 118176445 3.0E-06 AATTTCTTAATC 12 V_IRX4_01_M01410 TRANSFAC - 118176461 118176477 6.0E-06 TTAAAACAAGTTATTTA 17 V_IRX4_01_M01410 TRANSFAC + 118176462 118176478 7.0E-06 AAATAACTTGTTTTAAA 17 V_IRF3_Q3_M01279 TRANSFAC + 118175588 118175600 1.0E-06 TCTGTTTTGCTTT 13 V_PAX2_01_M00098 TRANSFAC + 118175263 118175281 9.0E-06 AAATGTCATGTATTTTTCA 19 V_BCL6_Q3_M01171 TRANSFAC - 118176583 118176592 5.0E-06 TTTTCTAGGT 10 V_MATH1_Q2_M01716 TRANSFAC + 118176600 118176609 6.0E-06 ACAGCTGGTG 10 V_YY1_Q6_02_M01035 TRANSFAC + 118175629 118175639 7.0E-06 TCCGCCATCTT 11 V_REX1_03_M01744 TRANSFAC - 118175628 118175639 6.0E-06 AAGATGGCGGAG 12 V_AP4_Q5_M00175 TRANSFAC + 118176599 118176608 6.0E-06 CACAGCTGGT 10 V_MEF2_04_M00233 TRANSFAC + 118176443 118176464 2.0E-06 ATTGATACTCAAAAAAGTTAAA 22 V_GATA1_09_M02254 TRANSFAC - 118175555 118175565 1.0E-06 AGAGATAAGGA 11 V_SMAD4_Q6_M00733 TRANSFAC - 118176531 118176545 2.0E-06 GTGGTGCAGCCATTT 15 V_STAT3_03_M01595 TRANSFAC + 118175319 118175334 8.0E-06 CCTTCTAGGAAGGCTG 16 V_IRX3_01_M01318 TRANSFAC - 118176461 118176477 9.0E-06 TTAAAACAAGTTATTTA 17 V_IRX5_01_M01472 TRANSFAC - 118176461 118176477 8.0E-06 TTAAAACAAGTTATTTA 17 V_IRX5_01_M01472 TRANSFAC + 118176462 118176478 8.0E-06 AAATAACTTGTTTTAAA 17 V_TAL1BETAITF2_01_M00070 TRANSFAC + 118175563 118175578 9.0E-06 TCTAGCAGATGTTTTG 16 V_TAL1_01_M01591 TRANSFAC + 118175553 118175565 8.0E-06 GGTCCTTATCTCT 13 V_TAL1ALPHAE47_01_M00066 TRANSFAC + 118175563 118175578 5.0E-06 TCTAGCAGATGTTTTG 16 V_FOXJ3_06_M02855 TRANSFAC - 118175585 118175601 1.0E-06 AAAAGCAAAACAGATGA 17 V_GEN_INI2_B_M00313 TRANSFAC + 118175807 118175814 1.0E-05 CCTCATTT 8 V_TCF7_04_M02921 TRANSFAC + 118175189 118175203 4.0E-06 TTGTATTACAATTAC 15 V_OCT1_06_M00162 TRANSFAC + 118175261 118175274 0.0E+00 CTAAATGTCATGTA 14 V_IRX2_01_M01405 TRANSFAC - 118176461 118176477 9.0E-06 TTAAAACAAGTTATTTA 17 V_DMRT2_01_M01147 TRANSFAC + 118175187 118175202 2.0E-06 TATTGTATTACAATTA 16 V_SRF_06_M02916 TRANSFAC - 118176566 118176582 5.0E-06 CTTTGAAATAAAACCAT 17 V_YY1_01_M00059 TRANSFAC - 118175481 118175497 5.0E-06 ACTCACCATTTTCTGAA 17 V_SOX15_04_M02903 TRANSFAC - 118175189 118175203 6.0E-06 GTAATTGTAATACAA 15 V_SOX5_07_M02909 TRANSFAC - 118175190 118175206 8.0E-06 AAAGTAATTGTAATACA 17 V_STAT1_05_M01260 TRANSFAC + 118175318 118175339 8.0E-06 GCCTTCTAGGAAGGCTGTGGGA 22 V_SOX14_03_M02798 TRANSFAC + 118175189 118175204 7.0E-06 TTGTATTACAATTACT 16 V_SOX14_03_M02798 TRANSFAC - 118175189 118175204 6.0E-06 AGTAATTGTAATACAA 16

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.