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RCCD1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 91433 RCC1 domain containing 1 chr15 + 91493105 - 91498605 91498105 Transcription Factor Binding Sites   Download all TFBS in the RCCD1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 91499939 91499957 1.0E-06 CGGCCGGCAGAGGGCGCTG 19 SOX10_HMG_full_dimeric_16_1 SELEX + 91502573 91502588 6.0E-06 AAAAAGCTCCAGTGTT 16 SOX9_HMG_full_dimeric_16_1 SELEX + 91502573 91502588 3.0E-06 AAAAAGCTCCAGTGTT 16 Zfp423_MA0116.1 JASPAR - 91498690 91498704 4.0E-06 CCAACCCAAGGGGGC 15 SOX8_HMG_DBD_dimeric_16_1 SELEX + 91502573 91502588 1.0E-06 AAAAAGCTCCAGTGTT 16 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX + 91498071 91498080 6.0E-06 GGCACGTGAC 10 RARA_nuclearreceptor_DBD_dimeric_18_2 SELEX + 91498660 91498677 6.0E-06 GAGGGCATAGGGTCAAGA 18 Barhl1_homeodomain_DBD_dimeric_16_1 SELEX + 91501081 91501096 1.0E-05 TTATGACTCCTAAATG 16 RUNX2_RUNX_DBD_dimeric_18_1 SELEX - 91499997 91500014 1.0E-06 AAGCCGCAGAAACCGAAG 18 BHLHE41_bHLH_full_dimeric_10_1 SELEX + 91498071 91498080 5.0E-06 GGCACGTGAC 10 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX + 91498071 91498080 8.0E-06 GGCACGTGAC 10 CTCF_C2H2_full_monomeric_17_1 SELEX - 91499940 91499956 2.0E-06 AGCGCCCTCTGCCGGCC 17 SP1_C2H2_DBD_monomeric_11_1 SELEX + 91498003 91498013 1.0E-05 GCCCCGCCCAC 11 NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 91498660 91498675 1.0E-06 GAGGGCATAGGGTCAA 16 Gata1_MA0035.2 JASPAR + 91499838 91499848 5.0E-06 ACAGATAAGGC 11 Mycn_MA0104.2 JASPAR + 91502613 91502622 9.0E-06 TGCACGTGGC 10 TP53_MA0106.1 JASPAR + 91498778 91498797 8.0E-06 CTGAAAATGCCCATGCAATT 20 REST_MA0138.2 JASPAR - 91498247 91498267 9.0E-06 ATTAGAACCACAGAGAGGACA 21 IRF3_IRF_full_trimeric_21_1 SELEX - 91499988 91500008 7.0E-06 CAGAAACCGAAGCCGAACCAG 21 POU3F3_POU_DBD_dimeric_12_1 SELEX + 91497833 91497844 3.0E-06 AAAAATATTAAA 12 RARG_nuclearreceptor_full_dimeric_16_1 SELEX + 91498660 91498675 1.0E-06 GAGGGCATAGGGTCAA 16 ARNTL_bHLH_DBD_dimeric_10_1 SELEX + 91498071 91498080 4.0E-06 GGCACGTGAC 10 RARA_nuclearreceptor_full_dimeric_15_1 SELEX + 91498660 91498674 2.0E-06 GAGGGCATAGGGTCA 15 BHLHB3_bHLH_full_dimeric_10_1 SELEX + 91498071 91498080 6.0E-06 GGCACGTGAC 10 Zfx_MA0146.1 JASPAR - 91498848 91498861 5.0E-06 CCCGCCTCGGCCTC 14 RUNX3_RUNX_DBD_dimeric_18_1 SELEX - 91499997 91500014 2.0E-06 AAGCCGCAGAAACCGAAG 18 V_AP2ALPHA_Q6_M01857 TRANSFAC - 91500448 91500458 3.0E-06 CGCCTCCGGCC 11 V_AP1_Q2_M00173 TRANSFAC + 91500959 91500969 6.0E-06 AGTGACTTAGT 11 V_E2A_Q6_01_M02088 TRANSFAC + 91500081 91500093 1.0E-05 CGACATCTGCCGC 13 V_GATA1_Q6_M02004 TRANSFAC + 91499835 91499849 5.0E-06 TTTACAGATAAGGCA 15 V_OSF2_Q6_M00731 TRANSFAC - 91499804 91499811 1.0E-05 ACCACAAA 8 V_BCL6_01_M01183 TRANSFAC - 91497832 91497847 5.0E-06 TAGTTTAATATTTTTT 16 V_ETS_B_M00340 TRANSFAC - 91498110 91498123 5.0E-06 AACAGGAAGCAGCT 14 V_IK_Q5_M01169 TRANSFAC + 91498843 91498852 3.0E-06 TTTGGGAGGC 10 V_AP2_Q6_M00189 TRANSFAC + 91500609 91500620 6.0E-06 AGCCCGCGGGCG 12 V_GKLF_02_M01588 TRANSFAC + 91498003 91498014 8.0E-06 GCCCCGCCCACC 12 V_PITX2_Q6_M02114 TRANSFAC + 91498829 91498838 1.0E-06 TGTAATCCCA 10 V_NERF_Q2_M00531 TRANSFAC - 91498107 91498124 0.0E+00 CAACAGGAAGCAGCTTTT 18 V_SP1_02_M01303 TRANSFAC - 91500138 91500148 3.0E-06 GGGGCGGGGAG 11 V_VAX2_01_M01327 TRANSFAC - 91498236 91498251 6.0E-06 GGACATTCATTAAGAC 16 V_LYF1_01_M00141 TRANSFAC + 91498843 91498851 9.0E-06 TTTGGGAGG 9 V_TAL1_GATA1_01_M02243 TRANSFAC + 91499829 91499846 9.0E-06 CTCCATTTTACAGATAAG 18 V_NFY_C_M00209 TRANSFAC + 91498507 91498520 4.0E-06 GGTGATTGGCCGCC 14 V_RPC155_01_M01798 TRANSFAC + 91498876 91498891 9.0E-06 CCAGGAATTTGAGACC 16 V_ETS_Q4_M00771 TRANSFAC + 91498110 91498121 1.0E-05 AGCTGCTTCCTG 12 V_ELF4_04_M02850 TRANSFAC + 91497828 91497844 7.0E-06 TCTCAAAAAATATTAAA 17 V_MTERF_01_M01245 TRANSFAC + 91497957 91497970 6.0E-06 GGGTTGGGGTTGGT 14 V_E2F1_01_M01250 TRANSFAC - 91499322 91499329 1.0E-05 CGTTTCTT 8 V_HOXA3_07_M02869 TRANSFAC + 91497832 91497845 3.0E-06 AAAAAATATTAAAC 14 V_AP1_Q4_M00188 TRANSFAC + 91500959 91500969 8.0E-06 AGTGACTTAGT 11 V_SP1_Q6_M00196 TRANSFAC - 91498002 91498014 3.0E-06 GGTGGGCGGGGCC 13 V_HNF1_Q6_01_M01011 TRANSFAC + 91497829 91497849 4.0E-06 CTCAAAAAATATTAAACTATC 21 V_YY1_Q6_02_M01035 TRANSFAC + 91499827 91499837 2.0E-06 TTCTCCATTTT 11 Tal1_Gata1_MA0140.1 JASPAR + 91499829 91499846 9.0E-06 CTCCATTTTACAGATAAG 18 V_DAX1_01_M01248 TRANSFAC + 91498673 91498692 0.0E+00 CAAGATCAAGGTCAGAGGCC 20 V_GATA1_09_M02254 TRANSFAC + 91499838 91499848 5.0E-06 ACAGATAAGGC 11 V_MYCN_01_M02259 TRANSFAC + 91502613 91502622 9.0E-06 TGCACGTGGC 10 V_BRACH_01_M00150 TRANSFAC - 91501080 91501103 9.0E-06 TGAGAGGCATTTAGGAGTCATAAC 24 V_SP3_Q3_M00665 TRANSFAC - 91493122 91493135 5.0E-06 ACCAGTGTGGAGGG 14 V_LMO2COM_01_M00277 TRANSFAC + 91500043 91500054 4.0E-06 CGCCAGGTGCAC 12 V_LMO2COM_01_M00277 TRANSFAC + 91500337 91500348 9.0E-06 CCGCAGGTGGAG 12 V_CTCF_02_M01259 TRANSFAC + 91499936 91499955 9.0E-06 CGGCGGCCGGCAGAGGGCGC 20 V_CTCF_01_M01200 TRANSFAC + 91499938 91499957 0.0E+00 GCGGCCGGCAGAGGGCGCTG 20 V_SP4_Q5_M01273 TRANSFAC + 91498003 91498013 9.0E-06 GCCCCGCCCAC 11 V_HBP1_04_M02866 TRANSFAC + 91499826 91499842 7.0E-06 TTTCTCCATTTTACAGA 17 V_CREM_Q6_M01820 TRANSFAC + 91498488 91498498 1.0E-05 CGACGTCACCG 11 V_CIZ_01_M00734 TRANSFAC + 91497831 91497839 6.0E-06 CAAAAAATA 9 V_TAL1_01_M01591 TRANSFAC - 91499838 91499850 1.0E-06 CTGCCTTATCTGT 13 V_AP1FJ_Q2_M00172 TRANSFAC + 91500959 91500969 1.0E-06 AGTGACTTAGT 11 V_E2F6_01_M01252 TRANSFAC - 91499322 91499329 1.0E-05 CGTTTCTT 8 V_ERR2_01_M01589 TRANSFAC + 91498678 91498689 2.0E-06 TCAAGGTCAGAG 12 V_GATA3_01_M00077 TRANSFAC - 91497823 91497831 4.0E-06 GAGATAGGG 9 V_PITX2_Q2_M00482 TRANSFAC + 91498829 91498839 0.0E+00 TGTAATCCCAA 11 V_REST_02_M02256 TRANSFAC - 91498247 91498267 9.0E-06 ATTAGAACCACAGAGAGGACA 21 V_LMO2COM_02_M00278 TRANSFAC + 91499839 91499847 3.0E-06 CAGATAAGG 9 V_HNF1A_Q5_M02013 TRANSFAC - 91497835 91497845 9.0E-06 GTTTAATATTT 11 V_GATA1_02_M00126 TRANSFAC + 91499836 91499849 2.0E-06 TTACAGATAAGGCA 14 V_NFYA_Q5_M02106 TRANSFAC - 91498505 91498518 2.0E-06 CGGCCAATCACCAG 14 V_SP1_Q4_01_M00932 TRANSFAC - 91498002 91498014 2.0E-06 GGTGGGCGGGGCC 13 V_GATA1_06_M00347 TRANSFAC + 91499838 91499847 1.0E-05 ACAGATAAGG 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.