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PRPF3 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9129 pre-mRNA processing factor 3 chr1 + 150288927 - 150294427 150293927 Transcription Factor Binding Sites   Download all TFBS in the PRPF3 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX4_HMG_DBD_dimeric_16_1 SELEX - 150293808 150293823 9.0E-06 GAGCAATTTCCTTGCT 16 Tp53_p53l_DBD_dimeric_18_1 SELEX - 150294850 150294867 0.0E+00 ACAAGCCCTTGGGCAAGT 18 IRF7_IRF_DBD_dimeric_14_1 SELEX - 150294912 150294925 1.0E-06 TAGAAAGTGAAAAC 14 ZNF713_C2H2_full_monomeric_17_1 SELEX + 150293741 150293757 3.0E-06 AAAAAAAAAGCTAAAAA 17 FOXG1_forkhead_DBD_dimeric_17_1 SELEX - 150294901 150294917 4.0E-06 GAAAACAAGAGTTCACA 17 OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 150293780 150293794 8.0E-06 GCTAAACCTATTAGC 15 IRF1_MA0050.1 JASPAR - 150294912 150294923 2.0E-06 GAAAGTGAAAAC 12 USF1_bHLH_DBD_dimeric_10_1 SELEX - 150293914 150293923 5.0E-06 AACACGTGAC 10 ETV2_ETS_DBD_monomeric_11_1 SELEX - 150293416 150293426 1.0E-05 AAGCGGAAATT 11 ETV2_ETS_DBD_monomeric_11_1 SELEX - 150293986 150293996 7.0E-06 AACCGGAAACC 11 E2F8_E2F_DBD_dimeric_12_1 SELEX - 150294167 150294178 3.0E-06 TCTCCCACCAAA 12 SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 150293914 150293923 5.0E-06 AACACGTGAC 10 Otx1_homeodomain_DBD_dimeric_15_1 SELEX - 150293780 150293794 1.0E-05 GCTAAACCTATTAGC 15 Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 150293914 150293923 6.0E-06 AACACGTGAC 10 TFEB_bHLH_full_dimeric_10_1 SELEX - 150293914 150293923 6.0E-06 AACACGTGAC 10 ELK1_MA0028.1 JASPAR - 150293988 150293997 1.0E-06 GAACCGGAAA 10 IRF9_IRF_full_trimeric_15_1 SELEX - 150294912 150294926 7.0E-06 ATAGAAAGTGAAAAC 15 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 150294910 150294924 8.0E-06 AGAAAGTGAAAACAA 15 MLXIPL_bHLH_full_dimeric_10_1 SELEX + 150293914 150293923 9.0E-06 GTCACGTGTT 10 ZNF282_C2H2_DBD_monomeric_17_1 SELEX - 150293916 150293932 1.0E-05 CTGTCTCCCAACACGTG 17 TFE3_bHLH_DBD_dimeric_10_1 SELEX - 150293914 150293923 5.0E-06 AACACGTGAC 10 ETV6_ETS_full_dimeric_15_1 SELEX - 150293416 150293430 2.0E-06 CCTGAAGCGGAAATT 15 ETV6_ETS_full_dimeric_15_1 SELEX - 150293986 150294000 0.0E+00 CCGGAACCGGAAACC 15 ELF5_MA0136.1 JASPAR - 150293811 150293819 5.0E-06 AATTTCCTT 9 V_FOXP1_01_M00987 TRANSFAC - 150293741 150293760 2.0E-06 TTTTTTTTAGCTTTTTTTTT 20 V_FOXP1_01_M00987 TRANSFAC - 150293744 150293763 2.0E-06 TTTTTTTTTTTAGCTTTTTT 20 V_SRF_Q6_M00186 TRANSFAC + 150293387 150293400 1.0E-05 CTCCATATGAGGAA 14 V_TST1_02_M01316 TRANSFAC + 150294837 150294853 3.0E-06 AAAGAATTACTTAACTT 17 V_USF_Q6_M00187 TRANSFAC + 150293914 150293923 7.0E-06 GTCACGTGTT 10 V_FXR_Q3_M00631 TRANSFAC + 150292632 150292645 8.0E-06 GAATGTGAATAACC 14 V_GATA2_02_M00348 TRANSFAC - 150292595 150292604 3.0E-06 AAAGATAACA 10 V_NF1_Q6_01_M00806 TRANSFAC - 150293764 150293780 6.0E-06 CTAGATTTCTGCCAAGG 17 V_EVI1_04_M00081 TRANSFAC + 150293749 150293763 4.0E-06 AGCTAAAAAAAAAAA 15 V_BCL6_01_M01183 TRANSFAC - 150293742 150293757 0.0E+00 TTTTTAGCTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 150293743 150293758 6.0E-06 TTTTTTAGCTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 150293747 150293762 1.0E-06 TTTTTTTTTTAGCTTT 16 V_BCL6_01_M01183 TRANSFAC - 150294837 150294852 8.0E-06 AGTTAAGTAATTCTTT 16 V_ISL2_01_M01328 TRANSFAC + 150294838 150294853 1.0E-06 AAGAATTACTTAACTT 16 V_IRF_Q6_01_M00972 TRANSFAC + 150293799 150293809 1.0E-05 GAAATAGAAAG 11 V_IRF_Q6_01_M00972 TRANSFAC - 150294913 150294923 1.0E-06 GAAAGTGAAAA 11 V_IRF2_Q6_M01882 TRANSFAC + 150293797 150293812 1.0E-06 GGGAAATAGAAAGCAA 16 V_IRF2_Q6_M01882 TRANSFAC - 150294910 150294925 0.0E+00 TAGAAAGTGAAAACAA 16 V_FOXO3A_Q1_M01137 TRANSFAC - 150294907 150294918 6.0E-06 TGAAAACAAGAG 12 V_TCFAP2E_04_M02926 TRANSFAC + 150293736 150293749 2.0E-06 GTCTCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 150293747 150293760 8.0E-06 AAAGCTAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 150293748 150293761 3.0E-06 AAGCTAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 150293749 150293762 1.0E-06 AGCTAAAAAAAAAA 14 V_TCFAP2C_04_M02925 TRANSFAC + 150294852 150294865 0.0E+00 TTGCCCAAGGGCTT 14 V_CETS1P54_02_M00074 TRANSFAC + 150293424 150293436 5.0E-06 CTTCAGGAAGTTA 13 V_TAL1_GATA1_01_M02243 TRANSFAC - 150292596 150292613 6.0E-06 TTTGTATCTAAAGATAAC 18 V_WT1_Q6_01_M02036 TRANSFAC - 150294211 150294220 4.0E-06 CGCCCCCGCC 10 V_ELF4_04_M02850 TRANSFAC + 150293737 150293753 0.0E+00 TCTCAAAAAAAAAGCTA 17 V_ELF4_04_M02850 TRANSFAC + 150293748 150293764 4.0E-06 AAGCTAAAAAAAAAAAC 17 V_ELF4_04_M02850 TRANSFAC + 150293750 150293766 0.0E+00 GCTAAAAAAAAAAACCT 17 V_ELF4_04_M02850 TRANSFAC + 150293751 150293767 3.0E-06 CTAAAAAAAAAAACCTT 17 V_PR_01_M00954 TRANSFAC - 150292647 150292673 7.0E-06 ACTAGAAGATGCAGTTGTTCTTCAGGG 27 V_ZFP105_03_M02827 TRANSFAC + 150293738 150293752 9.0E-06 CTCAAAAAAAAAGCT 15 V_ZFP105_03_M02827 TRANSFAC + 150293749 150293763 5.0E-06 AGCTAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC + 150293752 150293766 9.0E-06 TAAAAAAAAAAACCT 15 V_TBX18_01_M01262 TRANSFAC + 150294146 150294164 9.0E-06 GAGTGTGAAAGGAGTACCT 19 V_XFD3_01_M00269 TRANSFAC - 150294985 150294998 8.0E-06 TGAGTAGACATACA 14 V_KROX_Q6_M00982 TRANSFAC - 150294209 150294222 3.0E-06 CCCGCCCCCGCCCT 14 V_CEBPD_Q6_M00621 TRANSFAC + 150294841 150294852 3.0E-06 AATTACTTAACT 12 V_RSRFC4_Q2_M00407 TRANSFAC + 150293748 150293764 8.0E-06 AAGCTAAAAAAAAAAAC 17 V_PXRRXR_02_M01153 TRANSFAC - 150294903 150294910 1.0E-05 AGAGTTCA 8 V_IRF3_Q3_M01279 TRANSFAC + 150294910 150294922 1.0E-06 TTGTTTTCACTTT 13 V_MAZ_Q6_01_M02023 TRANSFAC + 150294214 150294227 5.0E-06 GGGGGCGGGAAGGA 14 V_EGR1_Q6_M01873 TRANSFAC + 150294212 150294221 4.0E-06 GCGGGGGCGG 10 V_IRF_Q6_M00772 TRANSFAC - 150293799 150293813 5.0E-06 CTTGCTTTCTATTTC 15 V_IRF_Q6_M00772 TRANSFAC + 150294909 150294923 1.0E-06 CTTGTTTTCACTTTC 15 V_MEF2_03_M00232 TRANSFAC - 150292592 150292613 2.0E-06 TTTGTATCTAAAGATAACAATG 22 V_ELF5_01_M01197 TRANSFAC + 150293425 150293435 1.0E-05 TTCAGGAAGTT 11 Tal1_Gata1_MA0140.1 JASPAR - 150292596 150292613 6.0E-06 TTTGTATCTAAAGATAAC 18 V_PIT1_01_M01465 TRANSFAC + 150294837 150294853 7.0E-06 AAAGAATTACTTAACTT 17 V_MUSCLE_INI_B_M00321 TRANSFAC - 150293928 150293948 2.0E-06 CGCCGCCGCCACGCCGCTGTC 21 V_BLIMP1_Q6_M01066 TRANSFAC + 150294144 150294159 7.0E-06 AGGAGTGTGAAAGGAG 16 V_ELF1_Q6_M00746 TRANSFAC + 150293391 150293402 4.0E-06 ATATGAGGAAAA 12 V_USF_Q6_01_M00796 TRANSFAC - 150293913 150293924 4.0E-06 CAACACGTGACC 12 V_MINI19_B_M00323 TRANSFAC - 150293928 150293948 5.0E-06 CGCCGCCGCCACGCCGCTGTC 21 V_SOX15_03_M02799 TRANSFAC - 150292587 150292603 6.0E-06 AAGATAACAATGTACAT 17 V_GATA1_05_M00346 TRANSFAC - 150292595 150292604 5.0E-06 AAAGATAACA 10 V_MTF1_06_M02882 TRANSFAC + 150293749 150293762 2.0E-06 AGCTAAAAAAAAAA 14 V_E2_01_M00107 TRANSFAC - 150294159 150294174 8.0E-06 CCACCAAACCAGGTAC 16 V_HAND1E47_01_M00222 TRANSFAC + 150294924 150294939 0.0E+00 TATGGCATCTGGATAT 16 V_BRN4_01_M01473 TRANSFAC + 150294837 150294853 5.0E-06 AAAGAATTACTTAACTT 17 V_IPF1_05_M01255 TRANSFAC + 150293438 150293449 9.0E-06 AGACATTAACTT 12 V_GATA3_02_M00350 TRANSFAC - 150292595 150292604 3.0E-06 AAAGATAACA 10 V_PARP_Q3_M01211 TRANSFAC + 150293796 150293805 4.0E-06 TGGGAAATAG 10 V_GATA6_01_M00462 TRANSFAC - 150292595 150292604 6.0E-06 AAAGATAACA 10 V_NRSF_01_M00256 TRANSFAC - 150294012 150294032 5.0E-06 TTCAGCCCCTGAGACGGAGCC 21 V_ZABC1_01_M01306 TRANSFAC - 150294183 150294190 1.0E-05 ATTCCAAC 8 V_CEBPB_Q6_M01896 TRANSFAC + 150294947 150294956 1.0E-06 TTGTGCAATA 10 V_EGR1_06_M02744 TRANSFAC - 150294209 150294222 8.0E-06 CCCGCCCCCGCCCT 14 V_IRF1_Q6_01_M01881 TRANSFAC - 150293798 150293811 9.0E-06 TGCTTTCTATTTCC 14 V_IRF1_Q6_01_M01881 TRANSFAC + 150294911 150294924 0.0E+00 TGTTTTCACTTTCT 14 V_SRF_02_M01257 TRANSFAC + 150293387 150293404 5.0E-06 CTCCATATGAGGAAAACA 18 V_SREBP1_02_M00221 TRANSFAC - 150295001 150295011 7.0E-06 TATTACCCCAC 11 V_GATA2_03_M00349 TRANSFAC - 150292595 150292604 7.0E-06 AAAGATAACA 10 V_SRF_06_M02916 TRANSFAC + 150293736 150293752 6.0E-06 GTCTCAAAAAAAAAGCT 17 V_SRF_06_M02916 TRANSFAC + 150293737 150293753 2.0E-06 TCTCAAAAAAAAAGCTA 17 V_SRF_06_M02916 TRANSFAC + 150293749 150293765 7.0E-06 AGCTAAAAAAAAAAACC 17 V_SRF_06_M02916 TRANSFAC + 150293750 150293766 0.0E+00 GCTAAAAAAAAAAACCT 17 V_SRF_06_M02916 TRANSFAC + 150293751 150293767 0.0E+00 CTAAAAAAAAAAACCTT 17 V_SRF_06_M02916 TRANSFAC + 150293752 150293768 5.0E-06 TAAAAAAAAAAACCTTG 17 V_RFX3_05_M02892 TRANSFAC + 150292595 150292617 7.0E-06 TGTTATCTTTAGATACAAAAATC 23 V_SOX12_03_M02796 TRANSFAC + 150292591 150292604 1.0E-05 ACATTGTTATCTTT 14 V_ELF5_04_M02241 TRANSFAC - 150293811 150293819 5.0E-06 AATTTCCTT 9 V_CEBP_Q2_01_M00912 TRANSFAC + 150294842 150294853 9.0E-06 ATTACTTAACTT 12 V_GATA6_04_M02757 TRANSFAC - 150292591 150292607 2.0E-06 TCTAAAGATAACAATGT 17 V_TCF3_05_M02920 TRANSFAC + 150293748 150293762 0.0E+00 AAGCTAAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 150293749 150293763 5.0E-06 AGCTAAAAAAAAAAA 15 V_PAX4_04_M00380 TRANSFAC + 150293741 150293770 1.0E-06 AAAAAAAAAGCTAAAAAAAAAAACCTTGGC 30 V_PPARA_01_M00242 TRANSFAC + 150293772 150293791 8.0E-06 GAAATCTAGCTAATAGGTTT 20 V_GATA1_06_M00347 TRANSFAC - 150292595 150292604 1.0E-05 AAAGATAACA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.