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PRPF4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9128 PRP4 pre-mRNA processing factor 4 homolog (yeast) chr9 + 116032913 - 116038413 116037913 Transcription Factor Binding Sites   Download all TFBS in the PRPF4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 116036863 116036881 0.0E+00 TGGCCACTAGGGAGCAGTA 19 PITX3_homeodomain_DBD_monomeric_9_1 SELEX + 116036930 116036938 1.0E-05 TTTAATCCC 9 Rxrb_nuclearreceptor_DBD_dimeric_14_1 SELEX + 116036911 116036924 1.0E-06 GAGGTTAAAGGGCA 14 RARA_nuclearreceptor_full_dimeric_18_1 SELEX - 116037888 116037905 8.0E-06 GTGGGCCAAGAGGGGTCA 18 NR4A2_nuclearreceptor_full_monomeric_11_1 SELEX + 116036914 116036924 1.0E-05 GTTAAAGGGCA 11 RFX4_RFX_DBD_dimeric_16_1 SELEX + 116037527 116037542 0.0E+00 GGTTTCTATGGTAACA 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 116037527 116037542 1.0E-06 TGTTACCATAGAAACC 16 TEF_bZIP_DBD_dimeric_12_1 SELEX - 116037028 116037039 9.0E-06 TATTACGTTATT 12 RXRG_nuclearreceptor_full_dimeric_14_1 SELEX + 116036911 116036924 2.0E-06 GAGGTTAAAGGGCA 14 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX + 116036911 116036924 1.0E-06 GAGGTTAAAGGGCA 14 Rarb_nuclearreceptor_DBD_dimeric_18_1 SELEX - 116037888 116037905 1.0E-05 GTGGGCCAAGAGGGGTCA 18 STAT1_MA0137.2 JASPAR + 116037683 116037697 6.0E-06 CCCTTCCCGGAACCT 15 IRF5_IRF_full_monomeric_11_1 SELEX + 116037709 116037719 4.0E-06 CAACGAAACTA 11 IRF7_IRF_DBD_trimeric_17_1 SELEX + 116036816 116036832 5.0E-06 GAAAAAAAAATCTATAC 17 Pax4_MA0068.1 JASPAR + 116036817 116036846 9.0E-06 AAAAAAAAATCTATACATTTTACCTTTTCT 30 SPIB_ETS_DBD_monomeric_14_1 SELEX + 116038312 116038325 5.0E-06 GAAATAGGGAAGTG 14 PITX1_homeodomain_full_monomeric_8_1 SELEX + 116036931 116036938 1.0E-05 TTAATCCC 8 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 116037527 116037542 0.0E+00 GGTTTCTATGGTAACA 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 116037527 116037542 0.0E+00 TGTTACCATAGAAACC 16 RARG_nuclearreceptor_DBD_dimeric_17_2 SELEX - 116037888 116037904 5.0E-06 TGGGCCAAGAGGGGTCA 17 FOXJ3_forkhead_DBD_dimeric_14_1 SELEX + 116036885 116036898 8.0E-06 ATTAACAGTTAAAA 14 NR2F1_nuclearreceptor_DBD_dimeric_15_1 SELEX + 116036911 116036925 1.0E-06 GAGGTTAAAGGGCAC 15 znf143_MA0088.1 JASPAR + 116037852 116037871 8.0E-06 CGACTTCCATCATGCTCCGC 20 NR2C2_nuclearreceptor_DBD_dimeric_14_1 SELEX + 116036911 116036924 1.0E-06 GAGGTTAAAGGGCA 14 SOX7_HMG_full_dimeric_16_1 SELEX + 116036888 116036903 2.0E-06 AACAGTTAAAAGTGCT 16 RARG_nuclearreceptor_DBD_dimeric_17_1 SELEX - 116037888 116037904 7.0E-06 TGGGCCAAGAGGGGTCA 17 RFX2_RFX_DBD_dimeric_16_1 SELEX + 116037527 116037542 0.0E+00 GGTTTCTATGGTAACA 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 116037527 116037542 0.0E+00 TGTTACCATAGAAACC 16 TEAD3_TEA_DBD_dimeric_17_1 SELEX - 116038401 116038417 3.0E-06 ACATTTCAAACGTTCCT 17 RFX5_RFX_DBD_dimeric_16_3 SELEX + 116037527 116037542 1.0E-06 GGTTTCTATGGTAACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 116037527 116037542 0.0E+00 TGTTACCATAGAAACC 16 RHOXF1_homeodomain_full_monomeric_8_1 SELEX + 116036931 116036938 1.0E-05 TTAATCCC 8 PITX1_homeodomain_full_monomeric_9_1 SELEX + 116036930 116036938 4.0E-06 TTTAATCCC 9 Stat3_MA0144.1 JASPAR - 116037685 116037694 3.0E-06 TTCCGGGAAG 10 ERF_ETS_DBD_monomeric_10_1 SELEX - 116037921 116037930 9.0E-06 ACAGGAAGTG 10 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 116037555 116037570 1.0E-06 CCAAGAAGACGTAAAC 16 HNF4A_MA0114.1 JASPAR + 116036912 116036924 7.0E-06 AGGTTAAAGGGCA 13 TEAD1_TEA_full_dimeric_17_1 SELEX - 116038401 116038417 6.0E-06 ACATTTCAAACGTTCCT 17 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX + 116036911 116036924 7.0E-06 GAGGTTAAAGGGCA 14 SPI1_ETS_full_monomeric_14_1 SELEX + 116038312 116038325 7.0E-06 GAAATAGGGAAGTG 14 Sox3_HMG_DBD_dimeric_17_1 SELEX - 116038418 116038434 7.0E-06 CAACATTACAAGTGTAT 17 RXRA_nuclearreceptor_full_dimeric_14_1 SELEX + 116036911 116036924 1.0E-06 GAGGTTAAAGGGCA 14 TP63_p53l_DBD_dimeric_18_1 SELEX - 116038426 116038443 6.0E-06 AACAAGTTACAACATTAC 18 ONECUT3_CUT_DBD_monomeric_14_1 SELEX + 116036820 116036833 3.0E-06 AAAAAATCTATACA 14 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 116036885 116036898 5.0E-06 ATTAACAGTTAAAA 14 IRX5_homeodomain_DBD_dimeric_12_1 SELEX - 116038423 116038434 9.0E-06 CAACATTACAAG 12 V_TAXCREB_01_M00114 TRANSFAC - 116037560 116037574 8.0E-06 GGGCGTTTACGTCTT 15 V_SPI1_01_M01203 TRANSFAC + 116038312 116038328 6.0E-06 GAAATAGGGAAGTGTCT 17 V_OBOX5_05_M03066 TRANSFAC - 116036926 116036942 5.0E-06 TAGTGGGATTAAAACCT 17 V_FOXA2_04_M02749 TRANSFAC + 116038548 116038564 7.0E-06 ATGAAGTAAACAGATTT 17 V_OBOX1_01_M01450 TRANSFAC - 116036927 116036943 2.0E-06 GTAGTGGGATTAAAACC 17 V_HMGIY_Q3_M01010 TRANSFAC - 116036817 116036831 5.0E-06 TATAGATTTTTTTTT 15 V_BCL6_01_M01183 TRANSFAC + 116038435 116038450 5.0E-06 TAACTTGTTATCCTTT 16 V_DEAF1_02_M01002 TRANSFAC + 116037980 116038004 6.0E-06 GAGTGTTCGGGTTTCGCTGGGGCCT 25 V_ETS_B_M00340 TRANSFAC - 116037918 116037931 0.0E+00 GACAGGAAGTGCGT 14 V_MAFB_03_M02879 TRANSFAC + 116036849 116036863 1.0E-06 AAACTGCAAAAAACT 15 V_FOXJ1_04_M02854 TRANSFAC - 116038426 116038440 1.0E-05 AAGTTACAACATTAC 15 V_GABP_B_M00341 TRANSFAC - 116037919 116037930 3.0E-06 ACAGGAAGTGCG 12 V_IRF_Q6_01_M00972 TRANSFAC - 116036965 116036975 7.0E-06 AGAAATGAAAC 11 V_IRF2_Q6_M01882 TRANSFAC - 116036962 116036977 3.0E-06 TGAGAAATGAAACGAA 16 V_GABPA_04_M02858 TRANSFAC + 116038280 116038295 8.0E-06 ATCTCTTCCGACTCAT 16 V_HNF4A_03_M02220 TRANSFAC + 116036912 116036924 7.0E-06 AGGTTAAAGGGCA 13 V_PITX2_Q6_M02114 TRANSFAC + 116036930 116036939 3.0E-06 TTTAATCCCA 10 V_NERF_Q2_M00531 TRANSFAC - 116037915 116037932 0.0E+00 TGACAGGAAGTGCGTCAC 18 V_PPAR_DR1_Q2_M00763 TRANSFAC - 116036912 116036924 7.0E-06 TGCCCTTTAACCT 13 V_COUPTF_Q6_M01036 TRANSFAC - 116036907 116036929 8.0E-06 ACCTGTGCCCTTTAACCTCTACA 23 V_PU1_Q4_M01172 TRANSFAC - 116036809 116036827 2.0E-06 GATTTTTTTTTCCCCCTTT 19 V_HOXA13_03_M01430 TRANSFAC - 116038361 116038376 8.0E-06 AGGTCTCATTAAAATT 16 V_CDX_Q5_M00991 TRANSFAC + 116036816 116036833 5.0E-06 GAAAAAAAAATCTATACA 18 V_HOXC13_01_M01317 TRANSFAC - 116038361 116038376 5.0E-06 AGGTCTCATTAAAATT 16 V_ETS_Q4_M00771 TRANSFAC + 116037918 116037929 2.0E-06 ACGCACTTCCTG 12 V_ELF4_04_M02850 TRANSFAC + 116036814 116036830 2.0E-06 GGGAAAAAAAAATCTAT 17 V_COMP1_01_M00057 TRANSFAC + 116036878 116036901 1.0E-06 AGTATAGATTAACAGTTAAAAGTG 24 V_OBOX5_02_M01480 TRANSFAC - 116036926 116036942 5.0E-06 TAGTGGGATTAAAACCT 17 V_SPI1_03_M02078 TRANSFAC - 116037939 116037948 1.0E-05 AGGGGAAGTG 10 V_GFI1_01_M00250 TRANSFAC + 116036816 116036839 2.0E-06 GAAAAAAAAATCTATACATTTTAC 24 V_STAF_01_M00262 TRANSFAC + 116037853 116037874 5.0E-06 GACTTCCATCATGCTCCGCGCC 22 V_STAT1_01_M00224 TRANSFAC - 116037680 116037700 9.0E-06 CCGAGGTTCCGGGAAGGGGCT 21 V_PXRRXR_02_M01153 TRANSFAC + 116037624 116037631 1.0E-05 AGAGTTCA 8 V_HNF3A_01_M01261 TRANSFAC + 116038551 116038560 2.0E-06 AAGTAAACAG 10 V_AP2BETA_Q3_M01858 TRANSFAC + 116038146 116038161 2.0E-06 GTGGAGGGCTGAGGAG 16 V_OBOX2_01_M01364 TRANSFAC - 116036927 116036943 3.0E-06 GTAGTGGGATTAAAACC 17 V_BCL6_Q3_M01171 TRANSFAC + 116037805 116037814 5.0E-06 GGTTCTAGGA 10 V_SPIB_01_M01204 TRANSFAC + 116038312 116038328 3.0E-06 GAAATAGGGAAGTGTCT 17 V_BBX_04_M02843 TRANSFAC + 116036880 116036896 3.0E-06 TATAGATTAACAGTTAA 17 V_TAXCREB_02_M00115 TRANSFAC + 116037933 116037947 1.0E-06 GTGACGCACTTCCCC 15 V_CETS1P54_01_M00032 TRANSFAC - 116037921 116037930 9.0E-06 ACAGGAAGTG 10 V_STAF_02_M00264 TRANSFAC + 116037741 116037761 2.0E-06 ACTTCCCAGACTGCTTGGAGC 21 V_CTCF_02_M01259 TRANSFAC + 116036860 116036879 6.0E-06 AACTGGCCACTAGGGAGCAG 20 V_STAT3_03_M01595 TRANSFAC - 116037681 116037696 3.0E-06 GGTTCCGGGAAGGGGC 16 V_CTCF_01_M01200 TRANSFAC + 116036862 116036881 2.0E-06 CTGGCCACTAGGGAGCAGTA 20 V_ELK1_01_M00007 TRANSFAC - 116037918 116037933 0.0E+00 CTGACAGGAAGTGCGT 16 V_HOXD9_Q2_M01834 TRANSFAC + 116038513 116038522 4.0E-06 AAGCATAAAA 10 V_TFIII_Q6_M00706 TRANSFAC - 116037657 116037665 1.0E-05 AGAGGTAGG 9 V_OTX2_Q3_M01719 TRANSFAC - 116036929 116036941 5.0E-06 AGTGGGATTAAAA 13 V_SOX15_03_M02799 TRANSFAC + 116036952 116036968 2.0E-06 TCCTGAACAATTCGTTT 17 V_MTF1_06_M02882 TRANSFAC - 116038463 116038476 4.0E-06 ATAGATGAAATAAC 14 V_GABPBETA_Q3_M01876 TRANSFAC - 116037920 116037930 1.0E-06 ACAGGAAGTGC 11 V_OBOX2_02_M03064 TRANSFAC - 116036927 116036943 3.0E-06 GTAGTGGGATTAAAACC 17 V_IPF1_05_M01255 TRANSFAC - 116038362 116038373 2.0E-06 TCTCATTAAAAT 12 V_PITX1_01_M01484 TRANSFAC - 116036927 116036943 1.0E-06 GTAGTGGGATTAAAACC 17 V_AIRE_01_M00999 TRANSFAC + 116036895 116036920 1.0E-05 AAAAGTGCTGGCTGTAGAGGTTAAAG 26 V_STAT_01_M00223 TRANSFAC + 116037686 116037694 7.0E-06 TTCCCGGAA 9 V_PITX2_Q2_M00482 TRANSFAC + 116036930 116036940 1.0E-06 TTTAATCCCAC 11 V_ETS1_B_M00339 TRANSFAC - 116037916 116037930 0.0E+00 ACAGGAAGTGCGTCA 15 V_SOX21_04_M02907 TRANSFAC - 116036951 116036967 6.0E-06 AACGAATTGTTCAGGAT 17 V_SRF_06_M02916 TRANSFAC + 116036812 116036828 3.0E-06 GGGGGAAAAAAAAATCT 17 V_SRF_06_M02916 TRANSFAC + 116036813 116036829 5.0E-06 GGGGAAAAAAAAATCTA 17 V_SRF_06_M02916 TRANSFAC + 116036814 116036830 1.0E-06 GGGAAAAAAAAATCTAT 17 V_RXRLXRB_01_M01198 TRANSFAC + 116036912 116036924 2.0E-06 AGGTTAAAGGGCA 13 V_HNF4_01_M00134 TRANSFAC + 116036909 116036927 3.0E-06 TAGAGGTTAAAGGGCACAG 19 V_SOX5_07_M02909 TRANSFAC - 116036952 116036968 4.0E-06 AAACGAATTGTTCAGGA 17 V_P300_01_M00033 TRANSFAC + 116037975 116037988 7.0E-06 AAAGGGAGTGTTCG 14 V_OBOX3_02_M03065 TRANSFAC - 116036927 116036943 5.0E-06 GTAGTGGGATTAAAACC 17 V_TCF3_05_M02920 TRANSFAC + 116036811 116036825 1.0E-06 AGGGGGAAAAAAAAA 15 V_TCF3_05_M02920 TRANSFAC + 116036812 116036826 0.0E+00 GGGGGAAAAAAAAAT 15 V_TCF3_05_M02920 TRANSFAC + 116036813 116036827 2.0E-06 GGGGAAAAAAAAATC 15 V_STAT1_Q6_M01823 TRANSFAC - 116037685 116037694 8.0E-06 TTCCGGGAAG 10 V_STAT1_05_M01260 TRANSFAC - 116037676 116037697 4.0E-06 AGGTTCCGGGAAGGGGCTAGGC 22 V_OBOX3_01_M01466 TRANSFAC - 116036927 116036943 5.0E-06 GTAGTGGGATTAAAACC 17 V_RFX1_02_M00281 TRANSFAC + 116037526 116037543 3.0E-06 GGGTTTCTATGGTAACAT 18 V_RFX1_02_M00281 TRANSFAC - 116037526 116037543 4.0E-06 ATGTTACCATAGAAACCC 18 V_PAX6_01_M00097 TRANSFAC - 116038498 116038518 9.0E-06 ATGCTTCCCGGATTACTGCTT 21 V_TR4_03_M01782 TRANSFAC + 116036912 116036924 2.0E-06 AGGTTAAAGGGCA 13 V_PPARG_01_M00512 TRANSFAC + 116036908 116036928 6.0E-06 GTAGAGGTTAAAGGGCACAGG 21

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