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INA Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9118 internexin neuronal intermediate filament protein, alpha chr10 + 105031919 - 105037419 105036919 Transcription Factor Binding Sites   Download all TFBS in the INA promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 105032831 105032841 9.0E-06 CATGAGTCACG 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 105032831 105032841 7.0E-06 CGTGACTCATG 11 Hoxc10_homeodomain_DBD_monomeric_10_2 SELEX + 105032896 105032905 9.0E-06 GTCATTAAAA 10 Hoxd9_homeodomain_DBD_monomeric_10_1 SELEX + 105032896 105032905 5.0E-06 GTCATTAAAA 10 HOXA10_homeodomain_DBD_monomeric_12_1 SELEX + 105032895 105032906 6.0E-06 AGTCATTAAAAC 12 POU3F3_POU_DBD_monomeric_12_1 SELEX - 105033139 105033150 9.0E-06 TTTAATAATTTT 12 NHLH1_MA0048.1 JASPAR + 105036748 105036759 2.0E-06 GCGCAGCTGCGG 12 NHLH1_MA0048.1 JASPAR - 105036748 105036759 2.0E-06 CCGCAGCTGCGC 12 NHLH1_MA0048.1 JASPAR + 105041702 105041713 3.0E-06 CAGCAGCTGCGT 12 NHLH1_MA0048.1 JASPAR - 105041702 105041713 4.0E-06 ACGCAGCTGCTG 12 POU5F1P1_POU_DBD_monomeric_9_1 SELEX + 105035146 105035154 8.0E-06 TATGCAAAA 9 POU2F3_POU_DBD_monomeric_9_1 SELEX + 105035146 105035154 8.0E-06 TATGCAAAA 9 Mafb_bZIP_DBD_monomeric_12_1 SELEX + 105033403 105033414 1.0E-06 ATTTTGCTGACT 12 EWSR1-FLI1_MA0149.1 JASPAR - 105036787 105036804 1.0E-05 GGAAGGGGGGCATCCAGG 18 Pou2f2_POU_DBD_monomeric_9_1 SELEX + 105035146 105035154 7.0E-06 TATGCAAAA 9 ZNF238_C2H2_full_monomeric_13_1 SELEX - 105033154 105033166 7.0E-06 GGCCCAGATGTTT 13 SPIB_ETS_DBD_monomeric_14_1 SELEX + 105033379 105033392 2.0E-06 AGAAAGCGGAACTC 14 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX + 105032896 105032905 2.0E-06 GTCATTAAAA 10 Esrra_nuclearreceptor_DBD_dimeric_17_1 SELEX + 105033097 105033113 8.0E-06 AGGCTCAGCCAAGATCA 17 HOXC11_homeodomain_full_monomeric_11_2 SELEX + 105032895 105032905 5.0E-06 AGTCATTAAAA 11 SP1_MA0079.2 JASPAR + 105036774 105036783 7.0E-06 CCCCGCCCCC 10 SP1_MA0079.2 JASPAR - 105041718 105041727 3.0E-06 CCCCTCCCCC 10 FOXB1_forkhead_DBD_putative-multimer_14_1 SELEX + 105032930 105032943 9.0E-06 AAATGCCACAGAGA 14 znf143_MA0088.1 JASPAR - 105033357 105033376 1.0E-05 CCCTTCCCATCCTCCAGTGG 20 HOXC11_homeodomain_DBD_monomeric_11_1 SELEX + 105032895 105032905 3.0E-06 AGTCATTAAAA 11 NRL_bZIP_DBD_monomeric_11_1 SELEX + 105033403 105033413 1.0E-06 ATTTTGCTGAC 11 IRF9_IRF_full_trimeric_15_1 SELEX + 105033377 105033391 6.0E-06 AAAGAAAGCGGAACT 15 FEV_MA0156.1 JASPAR - 105033460 105033467 1.0E-05 CAGGAAAT 8 JDP2_bZIP_full_dimeric_9_1 SELEX + 105032832 105032840 1.0E-05 ATGAGTCAC 9 Myf_MA0055.1 JASPAR + 105041699 105041710 5.0E-06 CGGCAGCAGCTG 12 HOXC10_homeodomain_DBD_monomeric_10_3 SELEX + 105032896 105032905 4.0E-06 GTCATTAAAA 10 HOXD12_homeodomain_DBD_monomeric_11_1 SELEX + 105032895 105032905 9.0E-06 AGTCATTAAAA 11 MAFK_bZIP_full_monomeric_12_1 SELEX + 105033402 105033413 3.0E-06 CATTTTGCTGAC 12 SPI1_ETS_full_monomeric_14_1 SELEX + 105033379 105033392 2.0E-06 AGAAAGCGGAACTC 14 REST_MA0138.2 JASPAR - 105038765 105038785 0.0E+00 ATCAGCACCGTGGACAGCGCC 21 POU3F3_POU_DBD_dimeric_12_1 SELEX + 105033139 105033150 8.0E-06 AAAATTATTAAA 12 Hoxa11_homeodomain_DBD_monomeric_11_1 SELEX + 105032895 105032905 5.0E-06 AGTCATTAAAA 11 NHLH1_bHLH_full_dimeric_10_1 SELEX + 105036749 105036758 2.0E-06 CGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 105036749 105036758 2.0E-06 CGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX + 105041703 105041712 5.0E-06 AGCAGCTGCG 10 NHLH1_bHLH_full_dimeric_10_1 SELEX - 105041703 105041712 4.0E-06 CGCAGCTGCT 10 RREB1_MA0073.1 JASPAR + 105038622 105038641 0.0E+00 CCCCAACACACACACACACA 20 RREB1_MA0073.1 JASPAR + 105038657 105038676 9.0E-06 CCAGCACACACACACACACA 20 HOXA10_homeodomain_DBD_monomeric_11_1 SELEX + 105032895 105032905 6.0E-06 AGTCATTAAAA 11 V_MEQ_01_M02049 TRANSFAC - 105033328 105033336 2.0E-06 AACACACAT 9 V_KLF15_Q2_M01714 TRANSFAC - 105036774 105036787 9.0E-06 GAGTGGGGGCGGGG 14 V_SPI1_01_M01203 TRANSFAC + 105033379 105033395 4.0E-06 AGAAAGCGGAACTCCAA 17 V_AP1_Q2_M00173 TRANSFAC - 105032891 105032901 3.0E-06 AATGACTCAGT 11 V_TCF3_01_M01594 TRANSFAC + 105036915 105036927 5.0E-06 CCTTTCTTCTGTA 13 V_TCFE2A_04_M02927 TRANSFAC - 105033151 105033167 5.0E-06 AGGCCCAGATGTTTGGC 17 V_BACH2_01_M00490 TRANSFAC + 105032831 105032841 6.0E-06 CATGAGTCACG 11 V_MAFK_03_M02776 TRANSFAC + 105033401 105033415 1.0E-06 ACATTTTGCTGACTT 15 V_NRSF_Q4_M01028 TRANSFAC + 105038766 105038784 0.0E+00 GCGCTGTCCACGGTGCTGA 19 V_HMGIY_Q3_M01010 TRANSFAC - 105033242 105033256 8.0E-06 TTTGCATTTTCTCAA 15 V_MAFB_05_M02775 TRANSFAC + 105033402 105033418 2.0E-06 CATTTTGCTGACTTTCA 17 V_ETS_B_M00340 TRANSFAC - 105033456 105033469 1.0E-05 TGCAGGAAATAGTC 14 V_STAT_Q6_M00777 TRANSFAC - 105038801 105038813 7.0E-06 ATAATTTCTGAGA 13 V_EGR_Q6_M00807 TRANSFAC - 105036775 105036785 6.0E-06 GTGGGGGCGGG 11 V_IRF2_Q6_M01882 TRANSFAC + 105033368 105033383 6.0E-06 TGGGAAGGGAAAGAAA 16 V_RP58_01_M00532 TRANSFAC + 105033153 105033164 3.0E-06 CAAACATCTGGG 12 V_SOX11_04_M02899 TRANSFAC + 105033139 105033152 7.0E-06 AAAATTATTAAAGC 14 V_YY1_Q6_M00793 TRANSFAC + 105041765 105041773 7.0E-06 GCCATCTTT 9 V_SP1_03_M02281 TRANSFAC + 105036774 105036783 7.0E-06 CCCCGCCCCC 10 V_SP1_03_M02281 TRANSFAC - 105041718 105041727 3.0E-06 CCCCTCCCCC 10 V_PITX2_Q6_M02114 TRANSFAC - 105032819 105032828 1.0E-06 TGTAATCCCA 10 V_SP1_02_M01303 TRANSFAC - 105036772 105036782 3.0E-06 GGGGCGGGGAG 11 V_GM497_04_M02864 TRANSFAC + 105038656 105038671 2.0E-06 ACCAGCACACACACAC 16 V_BRN2_01_M00145 TRANSFAC + 105033247 105033262 1.0E-05 AAAATGCAAAATGCAT 16 V_LDSPOLYA_B_M00317 TRANSFAC + 105033329 105033344 9.0E-06 TGTGTGTTTTGCCTTT 16 V_TAL1_GATA1_01_M02243 TRANSFAC + 105033221 105033238 3.0E-06 TTTGGAATCTCAGATAAG 18 V_NRSE_B_M00325 TRANSFAC - 105038765 105038785 0.0E+00 ATCAGCACCGTGGACAGCGCC 21 V_AP1_Q6_M00174 TRANSFAC - 105032891 105032901 1.0E-06 AATGACTCAGT 11 V_TAL1_Q6_M00993 TRANSFAC - 105037306 105037315 7.0E-06 TCCAGCTGAT 10 V_BACH1_01_M00495 TRANSFAC + 105032829 105032843 2.0E-06 GGCATGAGTCACGGT 15 V_IPF1_Q4_M00436 TRANSFAC - 105032895 105032906 1.0E-06 GTTTTAATGACT 12 V_MYF_01_M01302 TRANSFAC + 105041699 105041710 5.0E-06 CGGCAGCAGCTG 12 V_TCFAP2C_03_M02821 TRANSFAC - 105041682 105041696 1.0E-06 TTAGCCTGAGGGAAC 15 V_KROX_Q6_M00982 TRANSFAC + 105036775 105036788 0.0E+00 CCCGCCCCCACTCC 14 V_ZBP89_Q4_M01816 TRANSFAC - 105041717 105041726 4.0E-06 CCCTCCCCCA 10 V_AP1_Q6_01_M00925 TRANSFAC - 105032892 105032900 7.0E-06 ATGACTCAG 9 V_HOXB9_01_M01426 TRANSFAC + 105032893 105032908 3.0E-06 TGAGTCATTAAAACCA 16 V_AP1_Q4_M00188 TRANSFAC - 105032891 105032901 3.0E-06 AATGACTCAGT 11 V_SP1_Q6_M00196 TRANSFAC - 105036830 105036842 7.0E-06 TGGGGGCGGAGCT 13 V_IRF3_Q3_M01279 TRANSFAC - 105033371 105033383 6.0E-06 TTTCTTTCCCTTC 13 V_MEF2_03_M00232 TRANSFAC + 105033130 105033151 6.0E-06 CTTTGTGCTAAAATTATTAAAG 22 V_MATH1_Q2_M01716 TRANSFAC - 105038704 105038713 6.0E-06 TCAGCTGGTG 10 V_HOXD11_01_M01434 TRANSFAC + 105032892 105032908 8.0E-06 CTGAGTCATTAAAACCA 17 V_ASCL2_03_M02737 TRANSFAC - 105037251 105037267 2.0E-06 CCCTGCAGCTGCTCCTT 17 V_REST_01_M01256 TRANSFAC - 105032902 105032923 7.0E-06 GCTGACCACTCTCCTTGGTTTT 22 V_REST_01_M01256 TRANSFAC + 105038761 105038782 0.0E+00 TCGGGGCGCTGTCCACGGTGCT 22 V_OCT1_04_M00138 TRANSFAC + 105033242 105033264 5.0E-06 TTGAGAAAATGCAAAATGCATCT 23 Tal1_Gata1_MA0140.1 JASPAR + 105033221 105033238 3.0E-06 TTTGGAATCTCAGATAAG 18 V_AP4_Q5_M00175 TRANSFAC - 105038705 105038714 6.0E-06 GTCAGCTGGT 10 V_SPIB_01_M01204 TRANSFAC + 105033379 105033395 5.0E-06 AGAAAGCGGAACTCCAA 17 V_AP1_C_M00199 TRANSFAC - 105032892 105032900 6.0E-06 ATGACTCAG 9 V_POU6F1_01_M00465 TRANSFAC + 105033136 105033146 5.0E-06 GCTAAAATTAT 11 V_LMO2COM_01_M00277 TRANSFAC + 105037650 105037661 4.0E-06 CGCCAGGTGCAC 12 V_NKX63_01_M01470 TRANSFAC - 105032892 105032908 9.0E-06 TGGTTTTAATGACTCAG 17 V_OCT1_B_M00342 TRANSFAC + 105035146 105035155 8.0E-06 TATGCAAAAG 10 V_KAISO_01_M01119 TRANSFAC - 105033118 105033127 8.0E-06 ATCCTGCGAA 10 V_HOXD9_Q2_M01834 TRANSFAC + 105032895 105032904 8.0E-06 AGTCATTAAA 10 V_SP4_Q5_M01273 TRANSFAC + 105036773 105036783 9.0E-06 TCCCCGCCCCC 11 V_PTF1BETA_Q6_M00657 TRANSFAC - 105038709 105038722 1.0E-06 GAGGAAATGTCAGC 14 V_ZFP105_04_M02931 TRANSFAC - 105033138 105033154 5.0E-06 TGGCTTTAATAATTTTA 17 V_AP1_Q4_01_M00926 TRANSFAC + 105032893 105032900 1.0E-05 TGAGTCAT 8 V_MAZR_01_M00491 TRANSFAC + 105041718 105041730 4.0E-06 GGGGGAGGGGACA 13 V_POU5F1_01_M01307 TRANSFAC + 105033249 105033258 1.0E-06 AATGCAAAAT 10 V_HIF1_Q3_M00797 TRANSFAC - 105036939 105036952 6.0E-06 CCGGACGTGCGGCT 14 V_FAC1_01_M00456 TRANSFAC - 105033329 105033342 3.0E-06 AGGCAAAACACACA 14 V_IPF1_05_M01255 TRANSFAC + 105032895 105032906 1.0E-06 AGTCATTAAAAC 12 V_AP1FJ_Q2_M00172 TRANSFAC - 105032891 105032901 6.0E-06 AATGACTCAGT 11 NR1H2_RXRA_MA0115.1 JASPAR + 105035128 105035144 7.0E-06 ATGGTTCAGAGGTAAAC 17 V_FRA1_Q5_M01267 TRANSFAC + 105032893 105032900 1.0E-05 TGAGTCAT 8 V_NRSF_01_M00256 TRANSFAC - 105038765 105038785 0.0E+00 ATCAGCACCGTGGACAGCGCC 21 V_MYB_Q3_M00773 TRANSFAC - 105033274 105033284 4.0E-06 AGTGACAGTTG 11 V_PITX2_Q2_M00482 TRANSFAC - 105032818 105032828 1.0E-06 TGTAATCCCAG 11 V_REST_02_M02256 TRANSFAC - 105038765 105038785 0.0E+00 ATCAGCACCGTGGACAGCGCC 21 V_ZFP281_01_M01597 TRANSFAC - 105036774 105036784 6.0E-06 TGGGGGCGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 105041717 105041727 1.0E-06 TGGGGGAGGGG 11 V_TCFAP2A_03_M02819 TRANSFAC + 105041682 105041696 9.0E-06 GTTCCCTCAGGCTAA 15 V_TCFAP2A_03_M02819 TRANSFAC - 105041682 105041696 1.0E-06 TTAGCCTGAGGGAAC 15 V_ZFP281_04_M02831 TRANSFAC - 105041715 105041729 4.0E-06 GTCCCCTCCCCCAAC 15 V_EWSR1FLI1_01_M02252 TRANSFAC - 105036787 105036804 1.0E-05 GGAAGGGGGGCATCCAGG 18 V_NFE2_Q6_M02104 TRANSFAC - 105032886 105032901 2.0E-06 AATGACTCAGTTCTTA 16 V_IPF1_Q4_01_M01013 TRANSFAC + 105032893 105032907 1.0E-06 TGAGTCATTAAAACC 15 V_NFE2_01_M00037 TRANSFAC + 105032890 105032900 3.0E-06 AACTGAGTCAT 11 V_SP1_Q2_01_M00933 TRANSFAC + 105036774 105036783 4.0E-06 CCCCGCCCCC 10 V_HIF1_Q5_M00466 TRANSFAC - 105036940 105036951 5.0E-06 CGGACGTGCGGC 12 V_UF1H3BETA_Q6_M01068 TRANSFAC + 105041715 105041728 0.0E+00 GTTGGGGGAGGGGA 14 V_CMAF_01_M01070 TRANSFAC + 105033402 105033420 3.0E-06 CATTTTGCTGACTTTCAGT 19 V_SOX5_07_M02909 TRANSFAC + 105033136 105033152 9.0E-06 GCTAAAATTATTAAAGC 17 V_TCFAP2E_03_M02822 TRANSFAC + 105041682 105041696 5.0E-06 GTTCCCTCAGGCTAA 15 V_TCFAP2E_03_M02822 TRANSFAC - 105041682 105041696 1.0E-06 TTAGCCTGAGGGAAC 15 V_FEV_01_M02269 TRANSFAC - 105033460 105033467 1.0E-05 CAGGAAAT 8 V_GLIS2_04_M02863 TRANSFAC + 105033139 105033152 2.0E-06 AAAATTATTAAAGC 14 V_SMAD1_01_M01590 TRANSFAC - 105036914 105036925 3.0E-06 CAGAAGAAAGGA 12 V_SOX9_Q4_M01284 TRANSFAC + 105041829 105041839 6.0E-06 AAACAAAGAGA 11 V_TR4_03_M01782 TRANSFAC + 105035130 105035142 6.0E-06 GGTTCAGAGGTAA 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.