Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TMSB4Y Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9087 thymosin beta 4, Y-linked chrY + 15810446 - 15815946 15815446 Transcription Factor Binding Sites   Download all TFBS in the TMSB4Y promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints GABPA_MA0062.2 JASPAR + 15815873 15815883 7.0E-06 GCGGAAGTGGC 11 FOXA1_MA0148.1 JASPAR + 15815402 15815412 7.0E-06 TGTTTGCTCTC 11 Zfp652_C2H2_DBD_monomeric_13_1 SELEX - 15815858 15815870 7.0E-06 TCAAGTGGTTAAA 13 ELF4_ETS_full_monomeric_12_1 SELEX + 15815870 15815881 1.0E-06 AACGCGGAAGTG 12 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 15815445 15815456 5.0E-06 TCTGTTCCCACA 12 Pax4_MA0068.1 JASPAR + 15815372 15815401 3.0E-06 AAAAAAAAAAAAAAAAAAAAAATTTCTTAG 30 ELF3_ETS_full_monomeric_13_1 SELEX + 15815870 15815882 2.0E-06 AACGCGGAAGTGG 13 SOX7_HMG_full_dimeric_16_1 SELEX + 15815390 15815405 6.0E-06 AAAATTTCTTAGTGTT 16 SOX14_HMG_DBD_dimeric_12_1 SELEX - 15815412 15815423 5.0E-06 ACAATACCTTTG 12 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 15819414 15819430 4.0E-06 AAATTCTTGCCATTCTT 17 ZNF282_C2H2_DBD_monomeric_17_1 SELEX - 15819434 15819450 6.0E-06 CAATCCCACAAGACTAA 17 EHF_ETS_full_monomeric_12_1 SELEX + 15815870 15815881 2.0E-06 AACGCGGAAGTG 12 ELF5_ETS_full_monomeric_11_1 SELEX + 15815871 15815881 7.0E-06 ACGCGGAAGTG 11 ELF1_ETS_full_monomeric_12_1 SELEX + 15815870 15815881 1.0E-06 AACGCGGAAGTG 12 TEAD1_TEA_full_dimeric_17_1 SELEX + 15819414 15819430 1.0E-06 AAATTCTTGCCATTCTT 17 ELF3_ETS_DBD_monomeric_12_1 SELEX + 15815870 15815881 2.0E-06 AACGCGGAAGTG 12 SRY_HMG_DBD_dimeric_13_1 SELEX - 15815411 15815423 7.0E-06 ACAATACCTTTGA 13 ETV6_ETS_full_monomeric_10_1 SELEX + 15815872 15815881 5.0E-06 CGCGGAAGTG 10 Sox2_MA0143.1 JASPAR + 15816297 15816311 0.0E+00 CCATTGTCTTCCAAA 15 V_OSR1_03_M02784 TRANSFAC + 15819459 15819474 2.0E-06 AAAAACAGTAGCTCAC 16 V_MEIS1BHOXA9_02_M00421 TRANSFAC + 15815568 15815581 1.0E-06 TGACATTTTCACAG 14 V_TEL1_02_M02070 TRANSFAC + 15815872 15815881 8.0E-06 CGCGGAAGTG 10 V_LEF1_04_M02774 TRANSFAC + 15815458 15815474 6.0E-06 AGATCCTTTGTTCTGAG 17 V_HNF3_Q6_01_M01012 TRANSFAC - 15819495 15819512 3.0E-06 TTTATTATTTTTCTAAGT 18 V_AP4_Q6_02_M01860 TRANSFAC + 15815720 15815732 3.0E-06 CCAGCTGCAGCCT 13 V_TCFAP2E_04_M02926 TRANSFAC + 15819494 15819507 9.0E-06 AACTTAGAAAAATA 14 V_BARBIE_01_M00238 TRANSFAC - 15816331 15816345 5.0E-06 TTCTAAAGATGGGGG 15 V_TBX18_01_M01262 TRANSFAC - 15815565 15815583 1.0E-06 GGCTGTGAAAATGTCACAG 19 V_ZBP89_Q4_M01816 TRANSFAC + 15816327 15816336 2.0E-06 TCCTCCCCCA 10 V_NKX22_02_M01372 TRANSFAC + 15815859 15815875 2.0E-06 TTAACCACTTGAACGCG 17 V_YY1_Q6_02_M01035 TRANSFAC - 15815805 15815815 7.0E-06 ACTTCCATTTT 11 V_TEL1_01_M01993 TRANSFAC + 15815872 15815881 8.0E-06 CGCGGAAGTG 10 V_SOX11_03_M02795 TRANSFAC - 15815458 15815474 1.0E-06 CTCAGAACAAAGGATCT 17 V_MTF1_06_M02882 TRANSFAC + 15819494 15819507 2.0E-06 AACTTAGAAAAATA 14 V_ZSCAN4_04_M02942 TRANSFAC - 15815655 15815670 6.0E-06 CCCAGCACACAAAGCG 16 V_OSR2_03_M02785 TRANSFAC + 15819459 15819474 1.0E-06 AAAAACAGTAGCTCAC 16 V_DMRT2_01_M01147 TRANSFAC + 15816288 15816303 6.0E-06 GAGAAGAATCCATTGT 16 V_SOX2_01_M02246 TRANSFAC + 15816297 15816311 0.0E+00 CCATTGTCTTCCAAA 15 V_SRF_06_M02916 TRANSFAC + 15819495 15819511 6.0E-06 ACTTAGAAAAATAATAA 17 V_SOX4_01_M01308 TRANSFAC - 15815462 15815469 1.0E-05 AACAAAGG 8 V_SOX2_Q6_M01272 TRANSFAC + 15815458 15815473 3.0E-06 AGATCCTTTGTTCTGA 16 V_PAX4_04_M00380 TRANSFAC + 15815372 15815401 4.0E-06 AAAAAAAAAAAAAAAAAAAAAATTTCTTAG 30 V_PAX4_04_M00380 TRANSFAC + 15815373 15815402 0.0E+00 AAAAAAAAAAAAAAAAAAAAATTTCTTAGT 30 V_PAX4_04_M00380 TRANSFAC + 15815375 15815404 3.0E-06 AAAAAAAAAAAAAAAAAAATTTCTTAGTGT 30 V_SMAD1_01_M01590 TRANSFAC - 15815461 15815472 0.0E+00 CAGAACAAAGGA 12 V_SOX9_Q4_M01284 TRANSFAC - 15815460 15815470 3.0E-06 GAACAAAGGAT 11 V_NANOG_02_M01247 TRANSFAC - 15816292 15816311 1.0E-06 TTTGGAAGACAATGGATTCT 20 V_NANOG_02_M01247 TRANSFAC + 15819497 15819516 1.0E-06 TTAGAAAAATAATAAAACCA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.