Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

SLC7A6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 9057 solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 chr16 + 68293418 - 68298918 68298418 Transcription Factor Binding Sites   Download all TFBS in the SLC7A6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 68301792 68301807 1.0E-05 ATGCCTATGTAATGAA 16 CTCF_MA0139.1 JASPAR + 68295630 68295648 1.0E-06 GGGCCACAAGAGGGCGCCC 19 FOXO4_forkhead_DBD_dimeric_14_1 SELEX - 68299252 68299265 5.0E-06 CACAACATGTTTGC 14 Foxa2_MA0047.2 JASPAR + 68303283 68303294 6.0E-06 TATTTATTTTGG 12 Sox1_HMG_DBD_dimeric_14_1 SELEX + 68293649 68293662 5.0E-06 TGACTCACCATTCA 14 Sox1_HMG_DBD_dimeric_14_1 SELEX + 68303340 68303353 6.0E-06 TGAACTCCTAGTCA 14 SOX10_HMG_full_dimeric_14_1 SELEX - 68293649 68293662 2.0E-06 TGAATGGTGAGTCA 14 NFIA_NFI_full_dimeric_15_1 SELEX + 68302104 68302118 3.0E-06 TTGGATTTGTGCCAG 15 SPIC_ETS_full_monomeric_14_1 SELEX - 68299503 68299516 7.0E-06 GATATAAGGAAGTA 14 FOXA1_MA0148.1 JASPAR - 68299248 68299258 1.0E-06 TGTTTGCTTAG 11 ESR2_MA0258.1 JASPAR - 68295687 68295704 6.0E-06 CTGGGTCACCTCGTCCTT 18 FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 68303281 68303292 9.0E-06 AAAATAAATACT 12 IRX2_homeodomain_DBD_dimeric_12_1 SELEX - 68299257 68299268 2.0E-06 TTACACAACATG 12 RFX4_RFX_DBD_dimeric_16_1 SELEX + 68303379 68303394 0.0E+00 TGTTGCTATGGTTACG 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 68303379 68303394 0.0E+00 CGTAACCATAGCAACA 16 TBX20_TBX_DBD_dimeric_19_1 SELEX - 68299180 68299198 9.0E-06 AGGAGAGATAGTCACACAA 19 GRHL1_CP2_full_dimeric_12_1 SELEX - 68299765 68299776 2.0E-06 AAAACCGGTATA 12 TBP_MA0108.2 JASPAR + 68299275 68299289 5.0E-06 GTATAAATAGGAATC 15 TBP_MA0108.2 JASPAR + 68301812 68301826 0.0E+00 CTATAAAAACCCAAG 15 CUX1_CUT_DBD_dimeric_17_1 SELEX - 68299623 68299639 9.0E-06 AACGATCTGAGATCAAA 17 HLF_bZIP_full_dimeric_12_1 SELEX - 68299259 68299270 5.0E-06 CATTACACAACA 12 EWSR1-FLI1_MA0149.1 JASPAR + 68301729 68301746 5.0E-06 GGAGGGGAGAAAGGAGGA 18 NFIX_NFI_full_dimeric_15_2 SELEX - 68302104 68302118 1.0E-06 CTGGCACAAATCCAA 15 SOX8_HMG_DBD_dimeric_14_1 SELEX - 68293649 68293662 1.0E-06 TGAATGGTGAGTCA 14 TCF7L1_HMG_full_monomeric_12_1 SELEX - 68299621 68299632 5.0E-06 TGAGATCAAAGT 12 TBX1_TBX_DBD_dimeric_19_1 SELEX + 68299180 68299198 4.0E-06 TTGTGTGACTATCTCTCCT 19 Hoxc10_homeodomain_DBD_monomeric_10_1 SELEX - 68299772 68299781 6.0E-06 ATCATAAAAC 10 HOXD11_homeodomain_DBD_monomeric_10_2 SELEX - 68299773 68299782 4.0E-06 GATCATAAAA 10 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 68303379 68303394 0.0E+00 TGTTGCTATGGTTACG 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 68303379 68303394 0.0E+00 CGTAACCATAGCAACA 16 FIGLA_bHLH_DBD_dimeric_10_1 SELEX + 68295665 68295674 1.0E-06 ACCACCTGTT 10 FOXI1_MA0042.1 JASPAR + 68303280 68303291 3.0E-06 TAGTATTTATTT 12 Creb3l2_bZIP_DBD_dimeric_13_1 SELEX - 68298397 68298409 2.0E-06 CGCCACGTCACCC 13 NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 68299681 68299694 3.0E-06 GTGGAAAACCACCA 14 HOXC11_homeodomain_DBD_monomeric_11_1 SELEX - 68299772 68299782 8.0E-06 GATCATAAAAC 11 SOX9_HMG_full_dimeric_16_3 SELEX - 68303407 68303422 0.0E+00 AAGAATTTGAAGTCAT 12 CTCF_C2H2_full_monomeric_17_1 SELEX - 68295631 68295647 1.0E-06 GGCGCCCTCTTGTGGCC 17 Tcf7_HMG_DBD_monomeric_12_1 SELEX - 68299621 68299632 4.0E-06 TGAGATCAAAGT 12 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 68299659 68299669 9.0E-06 GAAAATAAACT 11 FOXC2_forkhead_DBD_dimeric_11_1 SELEX - 68303283 68303293 7.0E-06 CAAAATAAATA 11 NFIL3_bZIP_DBD_dimeric_12_1 SELEX - 68299259 68299270 4.0E-06 CATTACACAACA 12 RFX2_RFX_DBD_dimeric_16_1 SELEX + 68303379 68303394 0.0E+00 TGTTGCTATGGTTACG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 68303379 68303394 0.0E+00 CGTAACCATAGCAACA 16 TEAD3_TEA_DBD_dimeric_17_1 SELEX + 68299222 68299238 0.0E+00 ACATTCTGAAAATTCTT 17 POU1F1_POU_DBD_monomeric_17_1 SELEX + 68301789 68301805 2.0E-06 CTCATGCCTATGTAATG 17 RFX5_RFX_DBD_dimeric_16_3 SELEX + 68303379 68303394 4.0E-06 TGTTGCTATGGTTACG 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 68303379 68303394 0.0E+00 CGTAACCATAGCAACA 16 TBX15_TBX_DBD_dimeric_19_1 SELEX - 68299180 68299198 4.0E-06 AGGAGAGATAGTCACACAA 19 Stat3_MA0144.1 JASPAR - 68299666 68299675 7.0E-06 TGCCAGGAAA 10 Hltf_MA0109.1 JASPAR + 68299506 68299515 6.0E-06 TTCCTTATAT 10 NFIB_NFI_full_dimeric_15_1 SELEX + 68302104 68302118 2.0E-06 TTGGATTTGTGCCAG 15 CREB3L1_bZIP_full_dimeric_14_1 SELEX - 68298397 68298410 2.0E-06 CCGCCACGTCACCC 14 TEAD1_TEA_full_dimeric_17_1 SELEX + 68299222 68299238 0.0E+00 ACATTCTGAAAATTCTT 17 HOXC10_homeodomain_DBD_monomeric_10_3 SELEX - 68299772 68299781 8.0E-06 ATCATAAAAC 10 Hoxd9_homeodomain_DBD_monomeric_9_2 SELEX - 68299773 68299781 8.0E-06 ATCATAAAA 9 HOXD12_homeodomain_DBD_monomeric_11_1 SELEX - 68299772 68299782 9.0E-06 GATCATAAAAC 11 ELF5_MA0136.1 JASPAR + 68299503 68299511 4.0E-06 TACTTCCTT 9 RARG_nuclearreceptor_full_dimeric_16_1 SELEX + 68302083 68302098 8.0E-06 TCGGTCAGAAGTTCAG 16 FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 68299659 68299671 6.0E-06 AGGAAAATAAACT 13 FOXO6_forkhead_DBD_dimeric_14_1 SELEX + 68299252 68299265 7.0E-06 GCAAACATGTTGTG 14 RARA_nuclearreceptor_full_dimeric_15_1 SELEX + 68302083 68302097 4.0E-06 TCGGTCAGAAGTTCA 15 RREB1_MA0073.1 JASPAR - 68298636 68298655 3.0E-06 CCCCCCCTCACCCGCAGCGC 20 RORA_2_MA0072.1 JASPAR - 68295867 68295880 4.0E-06 CTAAAATGGGTCAG 14 Zfx_MA0146.1 JASPAR + 68298408 68298421 8.0E-06 CGGGGCGGGGCCTG 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 68299252 68299265 2.0E-06 CACAACATGTTTGC 14 IRX5_homeodomain_DBD_dimeric_12_1 SELEX - 68299257 68299268 1.0E-06 TTACACAACATG 12 V_DMRT4_01_M01149 TRANSFAC - 68302070 68302082 8.0E-06 ACTGTTTCAAGTT 13 V_RUSH1A_02_M01107 TRANSFAC + 68299506 68299515 6.0E-06 TTCCTTATAT 10 V_SRF_Q6_M00186 TRANSFAC - 68299731 68299744 2.0E-06 GGCCAAATAGGGAA 14 V_HNF3B_01_M00131 TRANSFAC - 68299249 68299263 5.0E-06 CAACATGTTTGCTTA 15 V_HNF3B_01_M00131 TRANSFAC + 68303278 68303292 2.0E-06 TATAGTATTTATTTT 15 V_DBX1_01_M01483 TRANSFAC + 68299031 68299047 6.0E-06 TTATCATTTTAAAATCA 17 V_FREAC7_01_M00293 TRANSFAC + 68299272 68299287 6.0E-06 TCAGTATAAATAGGAA 16 V_MYOD_Q6_M00184 TRANSFAC + 68295665 68295674 7.0E-06 ACCACCTGTT 10 V_XFD1_01_M00267 TRANSFAC - 68303279 68303292 1.0E-06 AAAATAAATACTAT 14 V_ZFX_01_M01593 TRANSFAC + 68298296 68298311 1.0E-06 GGCCAGGCCGTGGCGG 16 V_ZFX_01_M01593 TRANSFAC + 68298853 68298868 5.0E-06 GCGCGGGCCGCGCCGC 16 V_NF1A_Q6_M02103 TRANSFAC + 68302104 68302119 0.0E+00 TTGGATTTGTGCCAGG 16 V_HMGIY_Q3_M01010 TRANSFAC + 68303410 68303424 5.0E-06 ACTTCAAATTCTTCT 9 V_BCL6_01_M01183 TRANSFAC + 68299224 68299239 2.0E-06 ATTCTGAAAATTCTTT 16 V_BCL6_01_M01183 TRANSFAC + 68303276 68303291 4.0E-06 TATATAGTATTTATTT 16 V_COE1_Q6_M01871 TRANSFAC - 68297972 68297985 5.0E-06 ACTCTGGGGACTTG 14 V_RORA_Q4_M01138 TRANSFAC - 68295868 68295878 2.0E-06 AAAATGGGTCA 11 V_SP1_Q6_01_M00931 TRANSFAC + 68298409 68298418 4.0E-06 GGGGCGGGGC 10 V_ZTA_Q2_M00711 TRANSFAC - 68299262 68299274 5.0E-06 TGACCATTACACA 13 V_NFAT3_Q3_M01734 TRANSFAC + 68299662 68299671 3.0E-06 TTATTTTCCT 10 V_PLAG1_02_M01973 TRANSFAC + 68293654 68293669 3.0E-06 CACCATTCAAGGCCCC 16 V_RFX4_03_M02789 TRANSFAC - 68303377 68303391 1.0E-06 AACCATAGCAACAAT 15 V_P53_DECAMER_Q2_M00761 TRANSFAC - 68299437 68299446 4.0E-06 AGACAAGCCC 10 V_HNF3_Q6_01_M01012 TRANSFAC + 68303278 68303295 2.0E-06 TATAGTATTTATTTTGGG 18 V_HFH4_01_M00742 TRANSFAC + 68303280 68303292 6.0E-06 TAGTATTTATTTT 13 V_AREB6_04_M00415 TRANSFAC - 68302073 68302081 8.0E-06 CTGTTTCAA 9 V_PU1_Q4_M01172 TRANSFAC + 68299704 68299722 9.0E-06 TCTCCTCTCTTCCTCTCCT 19 V_ZFP281_05_M02935 TRANSFAC - 68295702 68295718 4.0E-06 TTTTTACCCCCACTCTG 17 V_CEBPB_01_M00109 TRANSFAC + 68299258 68299271 4.0E-06 ATGTTGTGTAATGG 14 V_NKX62_Q2_M00489 TRANSFAC - 68303281 68303292 1.0E-06 AAAATAAATACT 12 V_CDP_04_M01344 TRANSFAC + 68299025 68299039 1.0E-05 TGACGATTATCATTT 15 V_CDP_04_M01344 TRANSFAC - 68299025 68299039 7.0E-06 AAATGATAATCGTCA 15 V_HMGA2_01_M01300 TRANSFAC + 68299764 68299778 7.0E-06 ATATACCGGTTTTAT 15 V_PAX5_02_M00144 TRANSFAC + 68298666 68298693 1.0E-06 AGAGAGGGACCTCGAGCGTGAGGGCCGA 28 V_ELF4_04_M02850 TRANSFAC - 68303282 68303298 2.0E-06 GTTCCCAAAATAAATAC 17 V_POU3F2_01_M00463 TRANSFAC - 68300234 68300247 1.0E-06 TCACATTAAATCAT 14 V_RFXDC2_04_M02894 TRANSFAC - 68302176 68302192 8.0E-06 CTACCTGGAGACAGCAT 17 V_SOX8_04_M02912 TRANSFAC - 68299191 68299204 6.0E-06 ACATTCAGGAGAGA 14 V_TATA_01_M00252 TRANSFAC + 68299275 68299289 5.0E-06 GTATAAATAGGAATC 15 V_TATA_01_M00252 TRANSFAC + 68301812 68301826 0.0E+00 CTATAAAAACCCAAG 15 V_SPDEF_03_M02811 TRANSFAC + 68301843 68301858 9.0E-06 GAGCTTCCGGATAGCT 16 V_RSRFC4_Q2_M00407 TRANSFAC + 68299272 68299288 7.0E-06 TCAGTATAAATAGGAAT 17 V_OLF1_01_M00261 TRANSFAC + 68297794 68297815 7.0E-06 TGCAGCTCCCCCAAGAGGGGGG 22 V_OLF1_01_M00261 TRANSFAC + 68297970 68297991 0.0E+00 GACAAGTCCCCAGAGTGTGTGT 22 V_SP1_Q6_M00196 TRANSFAC + 68298407 68298419 4.0E-06 GCGGGGCGGGGCC 13 V_FOXK1_04_M02856 TRANSFAC - 68303370 68303384 2.0E-06 GCAACAATAACACCC 15 V_HNF3A_01_M01261 TRANSFAC + 68299250 68299259 5.0E-06 AAGCAAACAT 10 V_HNF3_Q6_M00791 TRANSFAC + 68299248 68299260 5.0E-06 CTAAGCAAACATG 13 V_HNF3_Q6_M00791 TRANSFAC - 68303281 68303293 4.0E-06 CAAAATAAATACT 13 V_HNF3_Q6_M00791 TRANSFAC - 68303322 68303334 9.0E-06 CCATACAAACAGT 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 68299248 68299258 3.0E-06 TGTTTGCTTAG 11 V_HNF3ALPHA_Q6_M00724 TRANSFAC + 68303283 68303293 2.0E-06 TATTTATTTTG 11 V_HMX1_01_M00433 TRANSFAC + 68298094 68298103 5.0E-06 CAAGTGCGAG 10 V_TATA_C_M00216 TRANSFAC + 68301811 68301820 1.0E-06 TCTATAAAAA 10 V_RFXDC2_03_M02790 TRANSFAC - 68303377 68303391 7.0E-06 AACCATAGCAACAAT 15 V_SFPI1_04_M02896 TRANSFAC + 68303286 68303299 7.0E-06 TTATTTTGGGAACT 14 V_ELF5_01_M01197 TRANSFAC - 68299503 68299513 0.0E+00 ATAAGGAAGTA 11 V_CUX1_04_M02959 TRANSFAC + 68299025 68299039 1.0E-05 TGACGATTATCATTT 15 V_CUX1_04_M02959 TRANSFAC - 68299025 68299039 7.0E-06 AAATGATAATCGTCA 15 V_JUNDM2_04_M02876 TRANSFAC + 68293644 68293659 2.0E-06 GTTTGTGACTCACCAT 16 V_JUNDM2_04_M02876 TRANSFAC - 68293645 68293660 0.0E+00 AATGGTGAGTCACAAA 16 V_MEF2_04_M00233 TRANSFAC + 68299268 68299289 0.0E+00 ATGGTCAGTATAAATAGGAATC 22 V_MEF2_04_M00233 TRANSFAC - 68303281 68303302 4.0E-06 CCCAGTTCCCAAAATAAATACT 22 V_MUSCLE_INI_B_M00321 TRANSFAC - 68300882 68300902 3.0E-06 TTGCGCCACCACACCCCAGCC 21 V_SPIB_01_M01204 TRANSFAC - 68299500 68299516 8.0E-06 GATATAAGGAAGTACTC 17 V_RREB1_01_M00257 TRANSFAC - 68298798 68298811 6.0E-06 CCACACACACCCCC 14 V_RREB1_01_M00257 TRANSFAC - 68301830 68301843 2.0E-06 CCCCAAACCCCCAG 14 V_XFD2_01_M00268 TRANSFAC + 68299274 68299287 7.0E-06 AGTATAAATAGGAA 14 V_CDC5_01_M00478 TRANSFAC + 68300236 68300247 5.0E-06 GATTTAATGTGA 12 V_MAFK_Q3_M02022 TRANSFAC + 68293649 68293659 9.0E-06 TGACTCACCAT 11 V_SRF_Q5_02_M01007 TRANSFAC + 68299728 68299746 8.0E-06 TCCTTCCCTATTTGGCCGT 19 V_CTCF_02_M01259 TRANSFAC + 68295627 68295646 0.0E+00 CAGGGGCCACAAGAGGGCGC 20 V_ATF1_04_M02842 TRANSFAC + 68299022 68299035 0.0E+00 GAATGACGATTATC 14 V_IRX3_01_M01318 TRANSFAC + 68299251 68299267 9.0E-06 AGCAAACATGTTGTGTA 17 V_CTCF_01_M01200 TRANSFAC + 68295629 68295648 0.0E+00 GGGGCCACAAGAGGGCGCCC 20 V_CTCF_01_M01200 TRANSFAC + 68298056 68298075 9.0E-06 GTGAGCTGTAGGGGGCGCCC 20 V_MZF1_02_M00084 TRANSFAC + 68299373 68299385 9.0E-06 TTGATAGGGGAAA 13 V_SP4_Q5_M01273 TRANSFAC - 68298408 68298418 2.0E-06 GCCCCGCCCCG 11 V_TBP_01_M00471 TRANSFAC + 68299276 68299283 4.0E-06 TATAAATA 8 V_AP4_01_M00005 TRANSFAC + 68298596 68298613 3.0E-06 AGAAACAGCGCGGGGCTG 18 V_CNOT3_01_M01253 TRANSFAC + 68298858 68298867 4.0E-06 GGCCGCGCCG 10 V_FOXJ3_06_M02855 TRANSFAC - 68303360 68303376 8.0E-06 AACACCCAAACACTACT 17 V_NKX3A_02_M01383 TRANSFAC - 68299308 68299324 6.0E-06 CAAGAGGTACTCAAAAA 17 V_FOXA2_03_M02260 TRANSFAC + 68303283 68303294 6.0E-06 TATTTATTTTGG 12 V_FOX_Q2_M00809 TRANSFAC + 68303280 68303292 1.0E-06 TAGTATTTATTTT 13 V_ZFP281_01_M01597 TRANSFAC - 68301710 68301720 9.0E-06 TGGGGGTAGGG 11 V_IRX2_01_M01405 TRANSFAC - 68300226 68300242 6.0E-06 TTAAATCATGTAAGTCT 17 V_LEF1TCF1_Q4_M00978 TRANSFAC + 68299621 68299631 3.0E-06 ACTTTGATCTC 11 V_HSF_Q6_M00641 TRANSFAC - 68301805 68301817 6.0E-06 TTATAGAGGCTTC 13 V_SRF_02_M01257 TRANSFAC - 68299727 68299744 4.0E-06 GGCCAAATAGGGAAGGAG 18 V_HFH3_01_M00289 TRANSFAC - 68299249 68299261 4.0E-06 ACATGTTTGCTTA 13 V_HFH3_01_M00289 TRANSFAC + 68303280 68303292 2.0E-06 TAGTATTTATTTT 13 V_EWSR1FLI1_01_M02252 TRANSFAC + 68301729 68301746 5.0E-06 GGAGGGGAGAAAGGAGGA 18 V_FOXJ2_01_M00422 TRANSFAC - 68303278 68303295 0.0E+00 CCCAAAATAAATACTATA 18 V_VDR_Q3_M00444 TRANSFAC - 68299704 68299718 1.0E-05 GAGGAAGAGAGGAGA 15 V_PLAGL1_03_M02786 TRANSFAC + 68298064 68298079 3.0E-06 TAGGGGGCGCCCTGGG 16 V_YY1_01_M00059 TRANSFAC + 68299029 68299045 6.0E-06 GATTATCATTTTAAAAT 17 V_RFX3_04_M02788 TRANSFAC - 68303373 68303395 1.0E-06 ACGTAACCATAGCAACAATAACA 23 V_SOX12_03_M02796 TRANSFAC + 68303375 68303388 9.0E-06 TTATTGTTGCTATG 14 V_PIT1_Q6_M00802 TRANSFAC - 68299272 68299289 4.0E-06 GATTCCTATTTATACTGA 18 V_UF1H3BETA_Q6_M01068 TRANSFAC - 68301709 68301722 0.0E+00 GTTGGGGGTAGGGC 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 68302125 68302138 4.0E-06 TGTTGGGGAGGGGC 14 V_HMEF2_Q6_M00406 TRANSFAC + 68301810 68301825 4.0E-06 CTCTATAAAAACCCAA 16 V_ELF5_04_M02241 TRANSFAC + 68299503 68299511 4.0E-06 TACTTCCTT 9 V_CEBP_Q2_01_M00912 TRANSFAC - 68299258 68299269 6.0E-06 ATTACACAACAT 12 V_SP1_Q4_01_M00932 TRANSFAC + 68298407 68298419 6.0E-06 GCGGGGCGGGGCC 13 V_TCF3_05_M02920 TRANSFAC - 68303283 68303297 2.0E-06 TTCCCAAAATAAATA 15 V_RFX1_02_M00281 TRANSFAC + 68303378 68303395 8.0E-06 TTGTTGCTATGGTTACGT 18 V_RFX1_02_M00281 TRANSFAC - 68303378 68303395 0.0E+00 ACGTAACCATAGCAACAA 18 V_PAX2_02_M00486 TRANSFAC - 68299658 68299666 2.0E-06 AATAAACTC 9 V_RORA2_01_M00157 TRANSFAC - 68295867 68295879 4.0E-06 TAAAATGGGTCAG 13 V_ESR2_01_M02377 TRANSFAC - 68295687 68295704 6.0E-06 CTGGGTCACCTCGTCCTT 18 V_NF1_Q6_M00193 TRANSFAC - 68302103 68302120 8.0E-06 ACCTGGCACAAATCCAAG 18 V_OCT4_01_M01125 TRANSFAC - 68299030 68299044 4.0E-06 TTTTAAAATGATAAT 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.