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C9orf69 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 90120 chromosome 9 open reading frame 69 chr9 - 139009777 - 139015731 139010277 Transcription Factor Binding Sites   Download all TFBS in the C9orf69 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR - 139014919 139014937 1.0E-06 AGCCCAGCAGATGGCGCCA 19 GABPA_MA0062.2 JASPAR - 139010255 139010265 0.0E+00 CCGGAAGTGGC 11 ELF4_ETS_full_monomeric_12_1 SELEX - 139010257 139010268 1.0E-06 GACCCGGAAGTG 12 RFX4_RFX_DBD_dimeric_16_1 SELEX + 139010279 139010294 8.0E-06 CGTTGCCCTGGAGACG 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 139010279 139010294 9.0E-06 CGTCTCCAGGGCAACG 16 Tcfap2a_TFAP_DBD_dimeric_13_1 SELEX - 139011611 139011623 8.0E-06 AGCCCTCAGGGCG 13 GMEB2_SAND_DBD_dimer-of-dimers_14_1 SELEX - 139010729 139010742 7.0E-06 AGCGTGCGCACGCA 14 Pax4_MA0068.1 JASPAR + 139005326 139005355 2.0E-06 GAAAAAATGAGAAACGTGAACTTCCTCCCT 30 SRF_MA0083.1 JASPAR + 139009302 139009313 4.0E-06 GCCCTTAAATGG 12 TFAP2C_TFAP_full_dimeric_13_1 SELEX + 139011611 139011623 7.0E-06 CGCCCTGAGGGCT 13 Klf4_MA0039.2 JASPAR + 139011419 139011428 2.0E-06 TGGGTGTGGC 10 TEAD1_TEA_full_monomeric_10_1 SELEX - 139011395 139011404 7.0E-06 CACATTCCTC 10 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 139010621 139010636 5.0E-06 TCACGCCCCCTCCACC 16 ELF3_ETS_full_monomeric_13_1 SELEX - 139010256 139010268 1.0E-06 GACCCGGAAGTGG 13 RELA_MA0107.1 JASPAR + 139011382 139011391 9.0E-06 GGGGGTTTCC 10 ZIC3_C2H2_full_monomeric_15_1 SELEX + 139014890 139014904 4.0E-06 GGCCTCCTGCTGCGC 15 HNF4A_nuclearreceptor_full_dimeric_15_1 SELEX - 139011592 139011606 6.0E-06 TGGTCCAAAGGACAG 15 TFAP2A_TFAP_DBD_dimeric_13_1 SELEX - 139011611 139011623 6.0E-06 AGCCCTCAGGGCG 13 RFX2_RFX_DBD_dimeric_16_1 SELEX + 139010279 139010294 1.0E-05 CGTTGCCCTGGAGACG 16 Klf12_C2H2_DBD_monomeric_15_1 SELEX - 139010486 139010500 7.0E-06 AACCACGCCCTCAGC 15 MTF1_C2H2_DBD_monomeric_14_1 SELEX - 139011060 139011073 1.0E-06 TTCGCACACGGCCC 14 TFAP2B_TFAP_DBD_dimeric_13_1 SELEX - 139011611 139011623 8.0E-06 AGCCCTCAGGGCG 13 EHF_ETS_full_monomeric_12_1 SELEX - 139010257 139010268 2.0E-06 GACCCGGAAGTG 12 Pou5f1_MA0142.1 JASPAR - 139005316 139005330 6.0E-06 TTTTCACTTGCAAAG 15 ELF5_ETS_full_monomeric_11_1 SELEX - 139010257 139010267 2.0E-06 ACCCGGAAGTG 11 ELF1_ETS_full_monomeric_12_1 SELEX - 139010257 139010268 6.0E-06 GACCCGGAAGTG 12 ELF3_ETS_DBD_monomeric_12_1 SELEX - 139010257 139010268 1.0E-06 GACCCGGAAGTG 12 TEAD4_TEA_DBD_monomeric_10_1 SELEX - 139011395 139011404 9.0E-06 CACATTCCTC 10 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 139009491 139009509 8.0E-06 GTGACTTTGGGCAGGTCAC 19 Nr2f6_nuclearreceptor_DBD_dimeric_15_1 SELEX - 139011593 139011607 6.0E-06 CTGGTCCAAAGGACA 15 ETV6_ETS_full_dimeric_15_1 SELEX - 139010257 139010271 3.0E-06 CGGGACCCGGAAGTG 15 NRF1_NRF_full_dimeric_12_1 SELEX + 139010800 139010811 1.0E-05 TGCGCCTGCGCT 12 NRF1_NRF_full_dimeric_12_1 SELEX + 139010834 139010845 9.0E-06 CGCGCACGCGCT 12 TEAD1_MA0090.1 JASPAR - 139011393 139011404 3.0E-06 CACATTCCTCGC 12 ZIC1_C2H2_full_monomeric_14_1 SELEX + 139014890 139014903 7.0E-06 GGCCTCCTGCTGCG 14 V_AP2ALPHA_Q6_M01857 TRANSFAC + 139014758 139014768 6.0E-06 CGCCCCCGGCC 11 V_E2A_Q6_01_M02088 TRANSFAC + 139014922 139014934 1.0E-05 CGCCATCTGCTGG 13 V_TEL1_02_M02070 TRANSFAC - 139010257 139010266 5.0E-06 CCCGGAAGTG 10 V_ZFX_01_M01593 TRANSFAC - 139014758 139014773 7.0E-06 GGCCAGGCCGGGGGCG 16 V_NERF_01_M01976 TRANSFAC - 139010257 139010266 9.0E-06 CCCGGAAGTG 10 V_LMAF_Q2_M01139 TRANSFAC + 139011452 139011460 6.0E-06 GGTCAGCAG 9 V_POU5F1_02_M02245 TRANSFAC - 139005316 139005330 6.0E-06 TTTTCACTTGCAAAG 15 V_RELBP52_01_M01239 TRANSFAC + 139011382 139011391 3.0E-06 GGGGGTTTCC 10 V_AP2_Q6_01_M00915 TRANSFAC + 139011127 139011139 1.0E-06 CGCCCCCCAGGCT 13 V_GKLF_02_M01588 TRANSFAC - 139011417 139011428 4.0E-06 GCCACACCCAGG 12 V_TR4_Q2_M01725 TRANSFAC + 139011591 139011601 6.0E-06 CCTGTCCTTTG 11 V_PPAR_DR1_Q2_M00763 TRANSFAC + 139010892 139010904 9.0E-06 AGTCCTTTGGCCC 13 V_PU1_Q4_M01172 TRANSFAC + 139005338 139005356 7.0E-06 AACGTGAACTTCCTCCCTT 19 V_TCFAP2E_04_M02926 TRANSFAC + 139005321 139005334 6.0E-06 CAAGTGAAAAAATG 14 V_STAT4_Q4_M01666 TRANSFAC + 139005355 139005368 2.0E-06 TTCACAGAAACTAA 14 V_ELF2_02_M02054 TRANSFAC - 139010257 139010266 8.0E-06 CCCGGAAGTG 10 V_SRF_C_M00215 TRANSFAC - 139009300 139009314 2.0E-06 GCCATTTAAGGGCTT 15 V_ZNF219_01_M01122 TRANSFAC + 139011299 139011310 4.0E-06 CGCCCCCCCGCC 12 V_FKLF_Q5_M01837 TRANSFAC + 139011017 139011026 5.0E-06 GGGGTGGGCG 10 V_GFI1_01_M00250 TRANSFAC + 139009753 139009776 6.0E-06 GGAAATAAAATCTGAGCAGGAAAG 24 V_E2F1_01_M01250 TRANSFAC - 139011802 139011809 1.0E-05 CGTTTCTT 8 V_PAX9_B_M00329 TRANSFAC + 139010600 139010623 2.0E-06 GACGGCCACCGTAGGGCGGCCTCA 24 V_SP4_03_M02810 TRANSFAC + 139010619 139010635 5.0E-06 CCTCACGCCCCCTCCAC 17 V_MAZ_Q6_01_M02023 TRANSFAC + 139009576 139009589 0.0E+00 GTGGGAGGGAAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 139009864 139009877 2.0E-06 GGAGGAGGGAGGGG 14 V_GADP_01_M01258 TRANSFAC + 139010257 139010268 1.0E-06 CACTTCCGGGTC 12 V_SP1SP3_Q4_M01219 TRANSFAC + 139010623 139010633 7.0E-06 ACGCCCCCTCC 11 V_ZBRK1_01_M01105 TRANSFAC + 139010885 139010899 9.0E-06 GTGGAGCAGTCCTTT 15 V_ZIC3_05_M02941 TRANSFAC - 139014892 139014906 1.0E-05 CAGCGCAGCAGGAGG 15 V_TEF_01_M01305 TRANSFAC - 139011393 139011404 3.0E-06 CACATTCCTCGC 12 V_KLF7_03_M02773 TRANSFAC - 139010487 139010502 2.0E-06 TGAACCACGCCCTCAG 16 V_RFX_Q6_M00975 TRANSFAC + 139009796 139009804 4.0E-06 CTGTTGCCA 9 V_TEL1_01_M01993 TRANSFAC - 139010257 139010266 5.0E-06 CCCGGAAGTG 10 V_CTCF_02_M01259 TRANSFAC - 139014921 139014940 2.0E-06 ACCAGCCCAGCAGATGGCGC 20 V_OCT4_02_M01124 TRANSFAC - 139005315 139005329 4.0E-06 TTTCACTTGCAAAGG 15 V_CTCF_01_M01200 TRANSFAC - 139014919 139014938 4.0E-06 CAGCCCAGCAGATGGCGCCA 20 V_ELF4_01_M01979 TRANSFAC - 139010257 139010266 4.0E-06 CCCGGAAGTG 10 V_ELK1_01_M00007 TRANSFAC - 139005341 139005356 7.0E-06 AAGGGAGGAAGTTCAC 16 V_GLI3_01_M01596 TRANSFAC + 139011480 139011490 7.0E-06 GTGGGTGGCCC 11 V_CAAT_01_M00254 TRANSFAC - 139011546 139011557 7.0E-06 TGCAGCCAATGA 12 V_ZIC2_05_M02940 TRANSFAC - 139014892 139014906 4.0E-06 CAGCGCAGCAGGAGG 15 V_ALPHACP1_01_M00687 TRANSFAC - 139011545 139011555 1.0E-05 CAGCCAATGAC 11 V_AP4_01_M00005 TRANSFAC - 139010673 139010690 9.0E-06 ACGCCCAGCGCGGGCCCG 18 V_EHF_06_M02745 TRANSFAC - 139010256 139010270 7.0E-06 GGGACCCGGAAGTGG 15 V_CNOT3_01_M01253 TRANSFAC - 139010545 139010554 8.0E-06 GGCCGCGCCC 10 V_ZBTB3_03_M02825 TRANSFAC + 139009551 139009567 8.0E-06 AATAGCACTGCCTTTGT 17 V_T3R_Q6_M00963 TRANSFAC + 139011591 139011599 7.0E-06 CCTGTCCTT 9 V_E2F6_01_M01252 TRANSFAC - 139011802 139011809 1.0E-05 CGTTTCTT 8 V_TEF1_Q6_03_M01817 TRANSFAC + 139011395 139011403 3.0E-06 GAGGAATGT 9 V_TFIIA_Q6_M00707 TRANSFAC - 139009635 139009646 8.0E-06 TCTGTAAGGGCC 12 V_ZFP206_01_M01742 TRANSFAC + 139010800 139010810 8.0E-06 TGCGCCTGCGC 11 V_ZFP206_01_M01742 TRANSFAC + 139010834 139010844 9.0E-06 CGCGCACGCGC 11 V_ZFP206_01_M01742 TRANSFAC + 139010868 139010878 1.0E-06 TGCGCAGGCGC 11 V_SRF_01_M00152 TRANSFAC + 139009300 139009317 5.0E-06 AAGCCCTTAAATGGCATC 18 V_STAT6_02_M00500 TRANSFAC - 139005282 139005289 1.0E-05 GATTTCCT 8 V_R_01_M00273 TRANSFAC + 139010928 139010948 1.0E-06 CTGGCCCCGGACTGAGGTGTC 21 V_PLAGL1_03_M02786 TRANSFAC - 139011120 139011135 3.0E-06 TGGGGGGCGCCCTCAT 16 V_EKLF_Q5_M01874 TRANSFAC - 139011418 139011427 5.0E-06 CCACACCCAG 10 V_ELF_02_M02053 TRANSFAC - 139010257 139010266 1.0E-05 CCCGGAAGTG 10 V_NFYA_Q5_M02106 TRANSFAC - 139011542 139011555 4.0E-06 CAGCCAATGACGGG 14 V_ZIC1_05_M02939 TRANSFAC - 139014892 139014906 3.0E-06 CAGCGCAGCAGGAGG 15 V_AP2_Q3_M00800 TRANSFAC - 139009824 139009839 1.0E-06 GGCCCCAGGCTGAATC 16 V_OCT4_01_M01125 TRANSFAC - 139005316 139005330 6.0E-06 TTTTCACTTGCAAAG 15

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.