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KALRN Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8997 kalirin, RhoGEF kinase chr3 + 123808557 - 123814057 123813557 Transcription Factor Binding Sites   Download all TFBS in the KALRN promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 123810541 123810554 1.0E-05 GAAAACATGTCTCT 14 EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 123811837 123811850 8.0E-06 TAATAAGAAAATAA 14 FOXC2_forkhead_DBD_monomeric_12_1 SELEX + 123811840 123811851 5.0E-06 TAAGAAAATAAT 12 SRF_MADS_DBD_dimeric_12_1 SELEX - 123811826 123811837 6.0E-06 ACCTTAAATGGA 12 PDX1_homeodomain_DBD_dimeric_18_1 SELEX + 123811826 123811843 1.0E-05 TCCATTTAAGGTAATAAG 18 TBX5_TBX_DBD_dimeric_20_1 SELEX + 123816434 123816453 4.0E-06 ATCTGTGATTTGACACACCT 20 TBX5_TBX_DBD_dimeric_20_1 SELEX - 123816434 123816453 2.0E-06 AGGTGTGTCAAATCACAGAT 20 ZNF435_C2H2_full_dimeric_18_1 SELEX + 123811800 123811817 3.0E-06 TGTGTTAACTACACACTG 18 FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 123811840 123811850 6.0E-06 TAAGAAAATAA 11 EWSR1-FLI1_MA0149.1 JASPAR - 123811972 123811989 2.0E-06 GGGAGAAAGCAAGCAGAG 18 GATA5_GATA_DBD_monomeric_8_1 SELEX + 123816833 123816840 7.0E-06 AGATAAGA 8 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 123816693 123816704 7.0E-06 CTTAATAATAGA 12 GATA4_GATA_DBD_monomeric_8_1 SELEX + 123816833 123816840 7.0E-06 AGATAAGA 8 POU4F3_POU_DBD_monomeric_16_1 SELEX + 123816693 123816708 7.0E-06 CTTAATAATAGATGCT 16 RUNX2_RUNX_DBD_monomeric_9_1 SELEX + 123811925 123811933 8.0E-06 AAACCACAA 9 POU6F2_POU_DBD_dimeric_16_1 SELEX - 123811836 123811851 7.0E-06 ATTATTTTCTTATTAC 16 RUNX2_RUNX_DBD_dimeric_18_1 SELEX - 123816704 123816721 1.0E-06 ACACCACAAAAACAGCAT 18 MEF2A_MA0052.1 JASPAR - 123816694 123816703 1.0E-05 CTATTATTAA 10 SP1_MA0079.2 JASPAR - 123811780 123811789 9.0E-06 CCCCTCCTCC 10 Gfi_MA0038.1 JASPAR - 123816436 123816445 2.0E-06 CAAATCACAG 10 NFIX_NFI_full_monomeric_9_2 SELEX + 123816735 123816743 8.0E-06 TTTGCCAAT 9 NFATC1_NFAT_full_dimeric_20_1 SELEX - 123810754 123810773 2.0E-06 AGTTGAATAAAATGTTCCAA 20 TBX4_TBX_DBD_dimeric_20_1 SELEX + 123816434 123816453 2.0E-06 ATCTGTGATTTGACACACCT 20 TBX4_TBX_DBD_dimeric_20_1 SELEX - 123816434 123816453 2.0E-06 AGGTGTGTCAAATCACAGAT 20 SOX7_HMG_full_dimeric_16_1 SELEX - 123816696 123816711 7.0E-06 AACAGCATCTATTATT 16 Gata1_MA0035.2 JASPAR + 123816831 123816841 0.0E+00 AGAGATAAGAA 11 GATA3_GATA_full_monomeric_8_1 SELEX + 123816833 123816840 7.0E-06 AGATAAGA 8 FEV_MA0156.1 JASPAR + 123816360 123816367 1.0E-05 CAGGAAAT 8 SRF_MADS_full_dimeric_16_1 SELEX + 123811824 123811839 7.0E-06 TGTCCATTTAAGGTAA 16 SRF_MADS_full_dimeric_16_1 SELEX - 123811824 123811839 8.0E-06 TTACCTTAAATGGACA 16 SOX21_HMG_DBD_dimeric_16_1 SELEX + 123810825 123810840 6.0E-06 AGAAATGAGCAGTGGT 16 RUNX1_MA0002.2 JASPAR - 123811925 123811935 4.0E-06 CCTTGTGGTTT 11 POU4F1_POU_DBD_monomeric_14_1 SELEX + 123816693 123816706 6.0E-06 CTTAATAATAGATG 14 RUNX3_RUNX_DBD_dimeric_18_1 SELEX - 123816704 123816721 3.0E-06 ACACCACAAAAACAGCAT 18 V_ELF5_02_M01980 TRANSFAC + 123816359 123816368 7.0E-06 CCAGGAAATT 10 V_OSF2_Q6_M00731 TRANSFAC - 123816712 123816719 1.0E-05 ACCACAAA 8 V_BTEB3_Q5_M01865 TRANSFAC + 123813528 123813540 7.0E-06 GTGTGGGAGGACT 13 V_MAFK_03_M02776 TRANSFAC + 123816740 123816754 1.0E-05 CAATTCTGCTGATTG 15 V_GATA2_02_M00348 TRANSFAC + 123816831 123816840 0.0E+00 AGAGATAAGA 10 V_XPF1_Q6_M00684 TRANSFAC - 123812038 123812047 1.0E-06 TCTGAAGAAC 10 V_NF1_Q6_01_M00806 TRANSFAC + 123810871 123810887 7.0E-06 ATGGGTTGAAGCCAATC 17 V_MYB_03_M02883 TRANSFAC - 123811930 123811945 9.0E-06 CCCCCAACTGCCTTGT 16 V_HMGIY_Q3_M01010 TRANSFAC - 123816359 123816373 3.0E-06 ATTTCAATTTCCTGG 15 V_AML3_Q6_M01856 TRANSFAC + 123811926 123811933 1.0E-05 AACCACAA 8 V_ETS_B_M00340 TRANSFAC + 123816461 123816474 6.0E-06 GGCAGGAAACATTA 14 V_IRF_Q6_01_M00972 TRANSFAC + 123816363 123816373 4.0E-06 GAAATTGAAAT 11 V_IRF2_Q6_M01882 TRANSFAC + 123816361 123816376 8.0E-06 AGGAAATTGAAATAAT 16 V_RFX4_03_M02789 TRANSFAC - 123816786 123816800 0.0E+00 CACCATAGCAACCAT 15 V_HNF3_Q6_01_M01012 TRANSFAC - 123811837 123811854 5.0E-06 AGCATTATTTTCTTATTA 18 V_SP1_03_M02281 TRANSFAC - 123811780 123811789 9.0E-06 CCCCTCCTCC 10 V_CMYB_Q5_M01821 TRANSFAC - 123811933 123811943 1.0E-06 CCCAACTGCCT 11 V_AFP1_Q6_M00616 TRANSFAC - 123816704 123816714 9.0E-06 AAAAACAGCAT 11 V_MYBL1_04_M02884 TRANSFAC - 123811931 123811945 4.0E-06 CCCCCAACTGCCTTG 15 V_P53_02_M00272 TRANSFAC + 123810543 123810552 9.0E-06 AAACATGTCT 10 V_P53_02_M00272 TRANSFAC - 123810543 123810552 2.0E-06 AGACATGTTT 10 V_P53_02_M00272 TRANSFAC + 123812107 123812116 1.0E-06 AGACATGCCT 10 V_P53_02_M00272 TRANSFAC - 123812107 123812116 4.0E-06 AGGCATGTCT 10 V_SRF_C_M00215 TRANSFAC - 123811823 123811837 3.0E-06 ACCTTAAATGGACAA 15 V_SRF_C_M00215 TRANSFAC + 123811826 123811840 4.0E-06 TCCATTTAAGGTAAT 15 V_COMP1_01_M00057 TRANSFAC - 123810870 123810893 4.0E-06 ACTCAAGATTGGCTTCAACCCATC 24 V_GC_01_M00255 TRANSFAC + 123811779 123811792 7.0E-06 AGGAGGAGGGGTTT 14 V_HNF3G_Q4_M02015 TRANSFAC + 123816719 123816726 7.0E-06 TGTTTGTT 8 V_RUNX1_01_M02257 TRANSFAC - 123811925 123811935 4.0E-06 CCTTGTGGTTT 11 V_POLY_C_M00212 TRANSFAC + 123810890 123810907 1.0E-06 GAGTAAAACTCCAGGCTG 18 V_IRF2_01_M00063 TRANSFAC + 123816425 123816437 7.0E-06 GATAAGTGAATCT 13 V_AML2_01_M01759 TRANSFAC + 123811926 123811933 1.0E-05 AACCACAA 8 V_AP2BETA_Q3_M01858 TRANSFAC + 123810836 123810851 8.0E-06 GTGGTGGGCTGGGGAG 16 V_HNF3_Q6_M00791 TRANSFAC + 123811839 123811851 9.0E-06 ATAAGAAAATAAT 13 V_CDX2_Q5_M00729 TRANSFAC - 123811835 123811848 1.0E-06 ATTTTCTTATTACC 14 V_HNF1_Q6_01_M01011 TRANSFAC + 123811831 123811851 3.0E-06 TTAAGGTAATAAGAAAATAAT 21 V_RFXDC2_03_M02790 TRANSFAC - 123816786 123816800 2.0E-06 CACCATAGCAACCAT 15 V_CMYB_01_M00004 TRANSFAC + 123811928 123811945 0.0E+00 CCACAAGGCAGTTGGGGG 18 V_MEF2_04_M00233 TRANSFAC - 123811822 123811843 7.0E-06 CTTATTACCTTAAATGGACAAG 22 V_GATA1_09_M02254 TRANSFAC + 123816831 123816841 0.0E+00 AGAGATAAGAA 11 V_SRF_Q5_02_M01007 TRANSFAC + 123811822 123811840 1.0E-06 CTTGTCCATTTAAGGTAAT 19 V_IRF7_01_M00453 TRANSFAC + 123816360 123816377 2.0E-06 CAGGAAATTGAAATAATG 18 V_GLI3_01_M01596 TRANSFAC + 123810563 123810573 8.0E-06 CTGGGTGGGCT 11 V_PTF1BETA_Q6_M00657 TRANSFAC + 123811921 123811934 8.0E-06 GAAGAAACCACAAG 14 V_MTF1_06_M02882 TRANSFAC + 123811837 123811850 1.0E-06 TAATAAGAAAATAA 14 V_SIRT6_01_M01797 TRANSFAC + 123816833 123816840 7.0E-06 AGATAAGA 8 V_FOXL1_04_M02753 TRANSFAC + 123811838 123811854 1.0E-05 AATAAGAAAATAATGCT 17 V_NKX3A_02_M01383 TRANSFAC - 123811678 123811694 4.0E-06 CACAAAGTACTTTCATA 17 V_NKX3A_02_M01383 TRANSFAC + 123811679 123811695 1.0E-05 ATGAAAGTACTTTGTGA 17 V_GATA3_02_M00350 TRANSFAC + 123816831 123816840 1.0E-06 AGAGATAAGA 10 V_GFI1B_01_M01058 TRANSFAC - 123816434 123816445 8.0E-06 CAAATCACAGAT 12 V_FPM315_01_M01587 TRANSFAC + 123811774 123811785 0.0E+00 GAGGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 123811777 123811788 4.0E-06 GGAGGAGGAGGG 12 V_ASCL2_04_M02841 TRANSFAC - 123816312 123816327 2.0E-06 CTATCCCCTCCTTACT 16 V_SRF_01_M00152 TRANSFAC + 123811823 123811840 2.0E-06 TTGTCCATTTAAGGTAAT 18 V_SRF_01_M00152 TRANSFAC - 123811823 123811840 6.0E-06 ATTACCTTAAATGGACAA 18 V_STAT1STAT1_Q3_M01212 TRANSFAC + 123810788 123810800 3.0E-06 ATTTCAAGTAAGA 13 V_IRF1_Q6_01_M01881 TRANSFAC - 123816362 123816375 4.0E-06 TTATTTCAATTTCC 14 V_SRF_02_M01257 TRANSFAC - 123811821 123811838 4.0E-06 TACCTTAAATGGACAAGA 18 V_SOX8_03_M02808 TRANSFAC - 123816691 123816707 1.0E-05 GCATCTATTATTAAGGA 17 V_GATA2_03_M00349 TRANSFAC + 123816831 123816840 0.0E+00 AGAGATAAGA 10 V_EWSR1FLI1_01_M02252 TRANSFAC - 123811972 123811989 2.0E-06 GGGAGAAAGCAAGCAGAG 18 V_COREBINDINGFACTOR_Q6_M00722 TRANSFAC - 123811925 123811932 1.0E-05 TGTGGTTT 8 V_RFX3_04_M02788 TRANSFAC - 123816782 123816804 2.0E-06 TCCCCACCATAGCAACCATCTCC 23 V_GMEB1_04_M02865 TRANSFAC - 123816765 123816780 6.0E-06 TAGTCAACGTCTATAA 16 V_CMAF_01_M01070 TRANSFAC + 123816741 123816759 9.0E-06 AATTCTGCTGATTGTATTC 19 V_GATA6_04_M02757 TRANSFAC + 123816828 123816844 2.0E-06 CATAGAGATAAGAAGCA 17 V_GFI1_Q6_01_M02010 TRANSFAC + 123816436 123816445 2.0E-06 CTGTGATTTG 10 V_FEV_01_M02269 TRANSFAC + 123816360 123816367 1.0E-05 CAGGAAAT 8 V_SMAD1_01_M01590 TRANSFAC + 123816813 123816824 2.0E-06 CAAAAGAAAAGA 12 V_NF1_Q6_M00193 TRANSFAC - 123816727 123816744 6.0E-06 AATTGGCAAACGCCCAGT 18 V_NANOG_02_M01247 TRANSFAC - 123811788 123811807 3.0E-06 TTAACACAAGAATGCAAACC 20 V_GATA1_06_M00347 TRANSFAC + 123816831 123816840 3.0E-06 AGAGATAAGA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.