Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

FATE1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 89885 fetal and adult testis expressed 1 chrX + 150879507 - 150885007 150884507 Transcription Factor Binding Sites   Download all TFBS in the FATE1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints CTCF_MA0139.1 JASPAR + 150882494 150882512 0.0E+00 ATGCCACCAGGGGGCAGTG 19 FOXO3_MA0157.1 JASPAR - 150880468 150880475 7.0E-06 TGTAAACA 8 FOXO1_forkhead_DBD_monomeric_8_1 SELEX - 150880467 150880474 7.0E-06 GTAAACAA 8 Foxq1_MA0040.1 JASPAR + 150880465 150880475 9.0E-06 AATTGTTTACA 11 Ascl2_bHLH_DBD_dimeric_10_1 SELEX + 150880437 150880446 9.0E-06 ACCAGCTGCT 10 SRY_MA0084.1 JASPAR - 150880466 150880474 3.0E-06 GTAAACAAT 9 CTCF_C2H2_full_monomeric_17_1 SELEX - 150882495 150882511 8.0E-06 ACTGCCCCCTGGTGGCA 17 Tp53_p53l_DBD_dimeric_17_1 SELEX - 150889344 150889360 8.0E-06 ACAACTCCCTAGCATGT 17 FOXB1_forkhead_full_monomeric_9_1 SELEX - 150880467 150880475 2.0E-06 TGTAAACAA 9 FOXO3_forkhead_full_monomeric_8_1 SELEX - 150880467 150880474 7.0E-06 GTAAACAA 8 V_MYB_Q6_M00183 TRANSFAC - 150882565 150882574 5.0E-06 ATCAACTGGC 10 V_MEQ_01_M02049 TRANSFAC - 150889171 150889179 7.0E-06 AACACACAC 9 V_FOXO3_02_M02270 TRANSFAC - 150880468 150880475 7.0E-06 TGTAAACA 8 V_AREB6_03_M00414 TRANSFAC + 150882520 150882531 4.0E-06 ATGCACCTGGAC 12 V_HP1SITEFACTOR_Q6_M00725 TRANSFAC + 150880465 150880476 4.0E-06 AATTGTTTACAG 12 V_MMEF2_Q6_M00405 TRANSFAC + 150889367 150889382 1.0E-05 ATGGATAAAAATGAAA 16 V_IRF2_Q6_M01882 TRANSFAC + 150889371 150889386 0.0E+00 ATAAAAATGAAAGCCA 16 V_FOXO3A_Q1_M01137 TRANSFAC - 150880464 150880475 7.0E-06 TGTAAACAATTC 12 V_SOX11_04_M02899 TRANSFAC + 150880463 150880476 6.0E-06 AGAATTGTTTACAG 14 V_HEN1_01_M00068 TRANSFAC + 150880431 150880452 7.0E-06 CTCAGTACCAGCTGCTTCCAGG 22 V_PU1_Q4_M01172 TRANSFAC + 150889264 150889282 8.0E-06 CACGCTCTTTTCCTCTATC 19 V_TAL1_Q6_M00993 TRANSFAC - 150889362 150889371 8.0E-06 TCCATCTGCC 10 V_TBX18_01_M01262 TRANSFAC + 150889173 150889191 9.0E-06 GTGTGTTAAATAAGCAGCT 19 V_FOXO1_02_M00474 TRANSFAC + 150880464 150880477 3.0E-06 GAATTGTTTACAGG 14 V_HIC1_06_M02867 TRANSFAC + 150882539 150882554 6.0E-06 TCCTGTGCCCAAGAAG 16 V_BCL6_Q3_M01171 TRANSFAC - 150889219 150889228 8.0E-06 AGTTCTAGGT 10 V_CTCF_02_M01259 TRANSFAC + 150882491 150882510 1.0E-06 CCTATGCCACCAGGGGGCAG 20 V_CTCF_01_M01200 TRANSFAC + 150882493 150882512 0.0E+00 TATGCCACCAGGGGGCAGTG 20 V_FREAC2_01_M00290 TRANSFAC - 150880464 150880479 8.0E-06 GACCTGTAAACAATTC 16 V_ELF1_Q6_M00746 TRANSFAC - 150889271 150889282 2.0E-06 GATAGAGGAAAA 12 V_AIRE_01_M00999 TRANSFAC + 150880467 150880492 2.0E-06 TTGTTTACAGGTCCATAAGGTTCATT 26 V_TCF4_Q5_M00671 TRANSFAC - 150889295 150889302 1.0E-05 CCTTTGAA 8 V_R_01_M00273 TRANSFAC + 150889155 150889175 7.0E-06 TGGTCCCTGGCATGTGGTGTG 21 V_PIT1_Q6_M00802 TRANSFAC - 150889366 150889383 4.0E-06 CTTTCATTTTTATCCATC 18 V_FOXO4_01_M00472 TRANSFAC - 150880464 150880474 4.0E-06 GTAAACAATTC 11

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.