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LHX4 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS Motifs 89884 LIM homeobox 4 chr1 + 180194432 - 180199932 180199432 Lhx4_homeodomain_DBD_monomeric_8_1 V_LHX4_01_M01421 Transcription Factor Binding Sites   Download all TFBS in the LHX4 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints HOXC13_homeodomain_DBD_monomeric_11_1 SELEX + 180198276 180198286 3.0E-06 TCTCGTAAATA 11 NR2F6_nuclearreceptor_full_dimeric_14_1 SELEX + 180203810 180203823 8.0E-06 AGGGGCAAAGGTCT 14 HOXD13_homeodomain_DBD_monomeric_11_1 SELEX + 180198276 180198286 6.0E-06 TCTCGTAAATA 11 TCF7L1_HMG_full_monomeric_12_1 SELEX + 180199450 180199461 1.0E-06 CGAGATCAAAGG 12 LEF1_HMG_DBD_monomeric_15_1 SELEX + 180199450 180199464 1.0E-06 CGAGATCAAAGGGAC 15 Tcfcp2l1_MA0145.1 JASPAR + 180198679 180198692 4.0E-06 CCAGCCTCAGCCAG 14 Rarb_nuclearreceptor_DBD_dimeric_17_1 SELEX - 180204004 180204020 9.0E-06 CGGTCGTAGCGAGGTCA 17 SP1_MA0079.2 JASPAR - 180199353 180199362 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR - 180199488 180199497 3.0E-06 CCCCTCCCCC 10 Tcf7_HMG_DBD_monomeric_12_1 SELEX + 180199450 180199461 2.0E-06 CGAGATCAAAGG 12 MZF1_5-13_MA0057.1 JASPAR + 180199356 180199365 4.0E-06 GGAGGGGGAA 10 HOXB13_homeodomain_DBD_monomeric_11_1 SELEX + 180198276 180198286 5.0E-06 TCTCGTAAATA 11 Myf_MA0055.1 JASPAR - 180199011 180199022 8.0E-06 CGGCAGCAGGTG 12 HOXA13_homeodomain_full_monomeric_11_1 SELEX + 180198276 180198286 1.0E-06 TCTCGTAAATA 11 HNF4A_MA0114.1 JASPAR + 180203811 180203823 3.0E-06 GGGGCAAAGGTCT 13 HNF4A_nuclearreceptor_full_dimeric_14_1 SELEX + 180203810 180203823 4.0E-06 AGGGGCAAAGGTCT 14 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX + 180197846 180197864 6.0E-06 GTGACCTCATTGGAGACAA 19 THRB_nuclearreceptor_DBD_dimeric_19_1 SELEX - 180197846 180197864 2.0E-06 TTGTCTCCAATGAGGTCAC 19 HOXC12_homeodomain_DBD_monomeric_11_1 SELEX + 180203852 180203862 1.0E-05 AGTCGTAAAGT 11 V_E2A_Q6_01_M02088 TRANSFAC + 180199008 180199020 3.0E-06 GACCACCTGCTGC 13 V_LEF1_04_M02774 TRANSFAC - 180199449 180199465 0.0E+00 AGTCCCTTTGATCTCGC 17 V_XFD1_01_M00267 TRANSFAC + 180198277 180198290 5.0E-06 CTCGTAAATACAGT 14 V_NRSF_Q4_M01028 TRANSFAC + 180198262 180198280 9.0E-06 TACCTGTCCATGCATCTCG 19 V_SPIB_02_M02041 TRANSFAC - 180203897 180203906 4.0E-06 AGAGGAAATA 10 V_TCF4_Q5_01_M02033 TRANSFAC + 180199454 180199463 5.0E-06 ATCAAAGGGA 10 V_EBOX_Q6_01_M01034 TRANSFAC + 180203999 180204008 8.0E-06 CCACATGACC 10 V_SP1_Q6_01_M00931 TRANSFAC - 180198911 180198920 4.0E-06 GGGGCGGGGC 10 V_ZFP740_03_M02834 TRANSFAC - 180199097 180199112 4.0E-06 CACCCCCCCCCCCTCC 16 V_HNF4ALPHA_Q6_M00638 TRANSFAC - 180203812 180203824 7.0E-06 CAGACCTTTGCCC 13 V_ATF3_Q6_01_M01863 TRANSFAC - 180199761 180199771 7.0E-06 ATTAAATCAGC 11 V_GABPA_04_M02858 TRANSFAC - 180198756 180198771 8.0E-06 CTATCTTCCTCCTCCT 16 V_SP1_03_M02281 TRANSFAC - 180199353 180199362 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC - 180199488 180199497 3.0E-06 CCCCTCCCCC 10 V_HNF4A_03_M02220 TRANSFAC + 180203811 180203823 3.0E-06 GGGGCAAAGGTCT 13 V_PPAR_DR1_Q2_M00763 TRANSFAC - 180203811 180203823 1.0E-06 AGACCTTTGCCCC 13 V_PRX2_Q2_M02115 TRANSFAC - 180200869 180200877 7.0E-06 TTAAAGTAA 9 V_PU1_Q4_M01172 TRANSFAC + 180203891 180203909 0.0E+00 CAAGTTTATTTCCTCTCTT 19 V_HOXA13_03_M01430 TRANSFAC + 180198273 180198288 3.0E-06 GCATCTCGTAAATACA 16 V_HOXC13_01_M01317 TRANSFAC + 180198273 180198288 3.0E-06 GCATCTCGTAAATACA 16 V_PPARGRXRA_01_M02262 TRANSFAC + 180203809 180203823 3.0E-06 GAGGGGCAAAGGTCT 15 V_SPIC_01_M02042 TRANSFAC - 180203897 180203906 7.0E-06 AGAGGAAATA 10 V_ZNF219_01_M01122 TRANSFAC - 180199101 180199112 1.0E-06 CACCCCCCCCCC 12 V_TCF3_04_M02816 TRANSFAC + 180199449 180199465 3.0E-06 GCGAGATCAAAGGGACT 17 V_MYF_01_M01302 TRANSFAC - 180199011 180199022 8.0E-06 CGGCAGCAGGTG 12 V_NFAT_Q6_M00302 TRANSFAC + 180199384 180199395 3.0E-06 AAGAGGAAAAAA 12 V_HIC1_03_M01073 TRANSFAC + 180199105 180199122 8.0E-06 GGGGGGTGCCGGCTTGCG 18 V_KROX_Q6_M00982 TRANSFAC - 180199084 180199097 1.0E-05 CCCGCCTCCGCCTC 14 V_OLF1_01_M00261 TRANSFAC + 180203643 180203664 9.0E-06 GAGGACTCCCAAGGGGCGAGAG 22 V_SP1_Q6_M00196 TRANSFAC - 180198910 180198922 6.0E-06 CAGGGGCGGGGCG 13 V_MAZ_Q6_01_M02023 TRANSFAC + 180199089 180199102 6.0E-06 GGAGGCGGGGAGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 180199094 180199107 2.0E-06 CGGGGAGGGGGGGG 14 V_MAZ_Q6_01_M02023 TRANSFAC + 180199375 180199388 3.0E-06 GGGGGAGGGAAGAG 14 V_AP2BETA_Q3_M01858 TRANSFAC + 180200056 180200071 8.0E-06 GGCCAGGCCTGAGGGC 16 V_HOXC11_01_M01329 TRANSFAC + 180203849 180203864 6.0E-06 GGAAGTCGTAAAGTCG 16 V_NFE4_Q5_M02105 TRANSFAC - 180200363 180200374 9.0E-06 CTCCCTCCCCTG 12 V_HBP1_03_M02762 TRANSFAC + 180199287 180199302 1.0E-06 AGTGTGAATGAATCAA 16 V_SP1SP3_Q4_M01219 TRANSFAC - 180199097 180199107 2.0E-06 CCCCCCCCTCC 11 V_SP1SP3_Q4_M01219 TRANSFAC - 180199100 180199110 7.0E-06 CCCCCCCCCCC 11 V_PPARG_03_M00528 TRANSFAC + 180203807 180203823 5.0E-06 GTGAGGGGCAAAGGTCT 17 V_TCF7_03_M02817 TRANSFAC + 180199449 180199465 2.0E-06 GCGAGATCAAAGGGACT 17 V_HFH1_01_M00129 TRANSFAC + 180203890 180203901 6.0E-06 TCAAGTTTATTT 12 V_HNF4_DR1_Q3_M00764 TRANSFAC - 180203811 180203823 4.0E-06 AGACCTTTGCCCC 13 V_HOXA11_01_M01378 TRANSFAC + 180203849 180203864 6.0E-06 GGAAGTCGTAAAGTCG 16 V_PPARA_02_M00518 TRANSFAC - 180203993 180204011 1.0E-06 CGAGGTCATGTGGGTCGCG 19 V_HIC1_02_M01072 TRANSFAC - 180200764 180200778 1.0E-06 CCAGGGTGCCCGGGG 15 V_MZF1_02_M00084 TRANSFAC + 180199353 180199365 1.0E-06 GGGGGAGGGGGAA 13 V_MZF1_02_M00084 TRANSFAC + 180203805 180203817 4.0E-06 AGGTGAGGGGCAA 13 V_GATA4_Q3_M00632 TRANSFAC + 180199452 180199463 2.0E-06 AGATCAAAGGGA 12 V_SP4_Q5_M01273 TRANSFAC + 180198911 180198921 8.0E-06 GCCCCGCCCCT 11 V_ELF1_Q6_M00746 TRANSFAC + 180199382 180199393 2.0E-06 GGAAGAGGAAAA 12 V_ALPHACP1_01_M00687 TRANSFAC - 180197851 180197861 5.0E-06 TCTCCAATGAG 11 V_TBP_01_M00471 TRANSFAC - 180199040 180199047 8.0E-06 TATAAATT 8 V_LEF1_Q2_01_M01022 TRANSFAC + 180199453 180199462 3.0E-06 GATCAAAGGG 10 V_AP4_01_M00005 TRANSFAC + 180200108 180200125 9.0E-06 ACGGTCAGCGCTTGCAGG 18 V_DR1_Q3_M00762 TRANSFAC + 180203811 180203823 1.0E-06 GGGGCAAAGGTCT 13 V_GATA3_02_M00350 TRANSFAC - 180204392 180204401 3.0E-06 TGAGATAATA 10 V_CPHX_01_M01478 TRANSFAC + 180199290 180199303 3.0E-06 GTGAATGAATCAAA 14 V_NRF1_Q6_M00652 TRANSFAC - 180200411 180200420 6.0E-06 CGCGTGCGCA 10 V_E47_01_M00002 TRANSFAC - 180199006 180199020 6.0E-06 GCAGCAGGTGGTCGG 15 V_NFAT2_02_M01749 TRANSFAC - 180200953 180200963 4.0E-06 TGCCATGGAAA 11 V_ZFP281_01_M01597 TRANSFAC + 180199352 180199362 3.0E-06 AGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC + 180199487 180199497 2.0E-06 GGGGGGAGGGG 11 V_TITF1_Q3_M00432 TRANSFAC + 180203888 180203897 2.0E-06 ACTCAAGTTT 10 V_LEF1TCF1_Q4_M00978 TRANSFAC - 180199451 180199461 2.0E-06 CCTTTGATCTC 11 V_TCFAP2A_03_M02819 TRANSFAC - 180200598 180200612 6.0E-06 ATTCCCTTCGGGAAA 15 V_MYF6_03_M02781 TRANSFAC + 180200669 180200684 7.0E-06 CCAGAACAGGTGCCCA 16 V_ZFP281_04_M02831 TRANSFAC - 180199097 180199111 1.0E-06 ACCCCCCCCCCCTCC 15 V_ZFP281_04_M02831 TRANSFAC - 180199098 180199112 2.0E-06 CACCCCCCCCCCCTC 15 V_ZFP281_04_M02831 TRANSFAC - 180199099 180199113 1.0E-05 GCACCCCCCCCCCCT 15 V_ZFP281_04_M02831 TRANSFAC - 180199100 180199114 8.0E-06 GGCACCCCCCCCCCC 15 V_ZFP281_04_M02831 TRANSFAC - 180199350 180199364 0.0E+00 TCCCCCTCCCCCTCC 15 V_GATA2_03_M00349 TRANSFAC - 180204392 180204401 7.0E-06 TGAGATAATA 10 V_HOXC10_01_M01361 TRANSFAC + 180203849 180203864 5.0E-06 GGAAGTCGTAAAGTCG 16 V_SP1_Q2_01_M00933 TRANSFAC + 180198912 180198921 7.0E-06 CCCCGCCCCT 10 V_FOXO4_01_M00472 TRANSFAC - 180200543 180200553 1.0E-05 ATAAACACGCC 11 V_UF1H3BETA_Q6_M01068 TRANSFAC + 180199372 180199385 6.0E-06 GGCGGGGGAGGGAA 14 V_HNF4_01_M00134 TRANSFAC + 180203808 180203826 6.0E-06 TGAGGGGCAAAGGTCTGCA 19 V_SP1_Q4_01_M00932 TRANSFAC - 180198910 180198922 6.0E-06 CAGGGGCGGGGCG 13 V_COUP_DR1_Q6_M00765 TRANSFAC - 180203811 180203823 2.0E-06 AGACCTTTGCCCC 13 PPARG_RXRA_MA0065.2 JASPAR + 180203809 180203823 3.0E-06 GAGGGGCAAAGGTCT 15 V_PPARA_01_M00242 TRANSFAC + 180203804 180203823 2.0E-06 CAGGTGAGGGGCAAAGGTCT 20 V_SPI1_02_M02043 TRANSFAC - 180203897 180203906 3.0E-06 AGAGGAAATA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.