Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

ARHGAP11B Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 89839 Rho GTPase activating protein 11B chr15 + 30913878 - 30919378 30918878 Transcription Factor Binding Sites   Download all TFBS in the ARHGAP11B promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX21_HMG_DBD_dimeric_15_1 SELEX + 30919890 30919904 5.0E-06 AGGAATTGCATTGTG 15 SOX4_HMG_DBD_dimeric_16_1 SELEX + 30919889 30919904 1.0E-05 CAGGAATTGCATTGTG 16 SOX10_HMG_full_dimeric_16_1 SELEX - 30916716 30916731 0.0E+00 GACAATCTTCAGTGTT 16 MSX2_homeodomain_DBD_dimeric_18_1 SELEX - 30919858 30919875 8.0E-06 GCTATTAAAATCTCATTC 18 SPIC_ETS_full_monomeric_14_1 SELEX + 30916645 30916658 4.0E-06 AAAAAGAGAAAGGA 14 BARX1_homeodomain_DBD_dimeric_17_1 SELEX + 30916681 30916697 1.0E-06 GCTTTAAAAAAGGATTA 17 SOX9_HMG_full_dimeric_16_1 SELEX - 30916716 30916731 0.0E+00 GACAATCTTCAGTGTT 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 30917226 30917241 8.0E-06 TGTTGCTTTAACAACT 16 SOX8_HMG_DBD_dimeric_16_1 SELEX - 30916716 30916731 0.0E+00 GACAATCTTCAGTGTT 16 ZNF435_C2H2_full_dimeric_18_1 SELEX - 30918599 30918616 9.0E-06 AATGTGAAGAGAACCCTT 18 SRY_HMG_DBD_dimeric_16_1 SELEX + 30916716 30916731 4.0E-06 AACACTGAAGATTGTC 16 SRY_HMG_DBD_dimeric_16_1 SELEX - 30916716 30916731 0.0E+00 GACAATCTTCAGTGTT 16 NFYA_MA0060.1 JASPAR + 30918253 30918268 3.0E-06 GTGGACCAATCAGATG 16 OTX2_homeodomain_DBD_dimeric_15_1 SELEX - 30916685 30916699 9.0E-06 CATAATCCTTTTTTA 15 Rfx3_RFX_DBD_dimeric_16_1 SELEX + 30917226 30917241 9.0E-06 AGTTGTTAAAGCAACA 16 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 30917226 30917241 9.0E-06 TGTTGCTTTAACAACT 16 E2F8_E2F_DBD_dimeric_12_1 SELEX + 30917878 30917889 6.0E-06 GTTCCCACCAAA 12 Creb3l2_bZIP_DBD_dimeric_13_1 SELEX + 30919878 30919890 5.0E-06 TGCCACATAATCA 13 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 30916663 30916673 8.0E-06 AAAAACAAAAA 11 SOX7_HMG_full_dimeric_16_1 SELEX - 30916716 30916731 0.0E+00 GACAATCTTCAGTGTT 16 RFX2_RFX_DBD_dimeric_16_1 SELEX + 30917226 30917241 8.0E-06 AGTTGTTAAAGCAACA 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 30917226 30917241 6.0E-06 TGTTGCTTTAACAACT 16 RFX5_RFX_DBD_dimeric_16_3 SELEX + 30917226 30917241 9.0E-06 AGTTGTTAAAGCAACA 16 RFX5_RFX_DBD_dimeric_16_3 SELEX - 30917226 30917241 5.0E-06 TGTTGCTTTAACAACT 16 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX + 30916645 30916659 7.0E-06 AAAAAGAGAAAGGAG 15 SOX21_HMG_DBD_dimeric_16_1 SELEX - 30916716 30916731 0.0E+00 GACAATCTTCAGTGTT 16 Sox11_HMG_DBD_dimeric_15_1 SELEX + 30919890 30919904 6.0E-06 AGGAATTGCATTGTG 15 REST_MA0138.2 JASPAR - 30918219 30918239 1.0E-05 ATCAGGACCCCGGAGGGTGGC 21 IRF3_IRF_full_trimeric_21_1 SELEX + 30916649 30916669 1.0E-05 AGAGAAAGGAGACGAAAAACA 21 ELF5_MA0136.1 JASPAR - 30916747 30916755 5.0E-06 AATTTCCTT 9 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 30916663 30916675 6.0E-06 AAAAACAAAAAGA 13 V_FOXP1_01_M00987 TRANSFAC - 30916639 30916658 4.0E-06 TCCTTTCTCTTTTTTTTTTT 20 V_OBOX6_01_M01445 TRANSFAC + 30916686 30916700 4.0E-06 AAAAAAGGATTATGA 15 V_ELK1_04_M01165 TRANSFAC + 30917680 30917690 6.0E-06 GACCGGAAGCT 11 V_MMEF2_Q6_M00405 TRANSFAC + 30916680 30916695 6.0E-06 AGCTTTAAAAAAGGAT 16 V_SATB1_Q3_M01723 TRANSFAC - 30916732 30916747 2.0E-06 TTTCTTAAAGACCCAT 16 V_IRF_Q6_01_M00972 TRANSFAC + 30916646 30916656 2.0E-06 AAAAGAGAAAG 11 V_SRY_02_M00160 TRANSFAC + 30916663 30916674 4.0E-06 AAAAACAAAAAG 12 V_IRF2_Q6_M01882 TRANSFAC + 30916644 30916659 5.0E-06 AAAAAAGAGAAAGGAG 16 V_CETS1P54_02_M00074 TRANSFAC + 30916744 30916756 3.0E-06 GAAAAGGAAATTT 13 V_TRF1_01_M01237 TRANSFAC + 30917893 30917907 1.0E-06 CGAGGGTTAAGGTTA 15 V_CEBPE_Q6_M01868 TRANSFAC + 30917824 30917837 6.0E-06 TAAGATTTCAGCAT 14 V_ZFP105_03_M02827 TRANSFAC + 30916662 30916676 1.0E-06 GAAAAACAAAAAGAG 15 V_POLY_C_M00212 TRANSFAC - 30919856 30919873 6.0E-06 TATTAAAATCTCATTCAA 18 V_HOXA3_07_M02869 TRANSFAC + 30916687 30916700 1.0E-05 AAAAAGGATTATGA 14 V_HOXB9_01_M01426 TRANSFAC - 30919863 30919878 3.0E-06 AGAGCTATTAAAATCT 16 V_HNF3_Q6_M00791 TRANSFAC + 30916663 30916675 3.0E-06 AAAAACAAAAAGA 13 V_IRF_Q6_M00772 TRANSFAC - 30916646 30916660 4.0E-06 TCTCCTTTCTCTTTT 15 V_CDX2_Q5_M00729 TRANSFAC + 30919863 30919876 3.0E-06 AGATTTTAATAGCT 14 V_ASCL2_03_M02737 TRANSFAC + 30917732 30917748 2.0E-06 TTCTGCAGCTGCCACCT 17 V_ELF5_01_M01197 TRANSFAC + 30916745 30916755 1.0E-06 AAAAGGAAATT 11 V_SOX12_04_M02900 TRANSFAC + 30916645 30916660 5.0E-06 AAAAAGAGAAAGGAGA 16 V_NKX3A_01_M00451 TRANSFAC - 30917802 30917813 6.0E-06 AATTAAGTACAA 12 V_NCX_02_M01420 TRANSFAC - 30917802 30917818 8.0E-06 TAGGAAATTAAGTACAA 17 V_ATF1_04_M02842 TRANSFAC + 30916695 30916708 8.0E-06 TTATGACGTAGAAA 14 V_FOXO1_Q5_M01216 TRANSFAC + 30916663 30916671 1.0E-06 AAAAACAAA 9 V_IRF7_01_M00453 TRANSFAC + 30916741 30916758 1.0E-06 TAAGAAAAGGAAATTTGA 18 V_ELF1_Q6_M00746 TRANSFAC - 30918035 30918046 2.0E-06 ATTTGAGGAAAT 12 V_FAC1_01_M00456 TRANSFAC + 30916660 30916673 3.0E-06 ACGAAAAACAAAAA 14 V_PXR_Q2_M00964 TRANSFAC + 30917901 30917912 3.0E-06 AAGGTTACTAAA 12 V_XBP1_01_M00251 TRANSFAC + 30916694 30916710 9.0E-06 ATTATGACGTAGAAAAA 17 V_NFY_01_M00287 TRANSFAC + 30918253 30918268 2.0E-06 GTGGACCAATCAGATG 16 V_REST_02_M02256 TRANSFAC - 30918219 30918239 1.0E-05 ATCAGGACCCCGGAGGGTGGC 21 V_IRF1_Q6_01_M01881 TRANSFAC - 30916645 30916658 3.0E-06 TCCTTTCTCTTTTT 14 V_IRF1_Q6_01_M01881 TRANSFAC - 30916743 30916756 8.0E-06 AAATTTCCTTTTCT 14 V_LXRA_RXRA_Q3_M00647 TRANSFAC + 30917898 30917912 2.0E-06 GTTAAGGTTACTAAA 15 V_MYF6_03_M02781 TRANSFAC + 30917219 30917234 2.0E-06 AATAAACAGTTGTTAA 16 V_SOX2_Q6_M01272 TRANSFAC - 30916662 30916677 7.0E-06 GCTCTTTTTGTTTTTC 16 V_PIT1_Q6_M00802 TRANSFAC - 30918711 30918728 9.0E-06 ACTTCTTTCTGATTCTTT 18 V_SOX15_04_M02903 TRANSFAC + 30919856 30919870 8.0E-06 TTGAATGAGATTTTA 15 V_MEF2A_05_M01301 TRANSFAC - 30919865 30919876 9.0E-06 AGCTATTAAAAT 12 V_ELF5_04_M02241 TRANSFAC - 30916747 30916755 5.0E-06 AATTTCCTT 9 V_TAACC_B_M00331 TRANSFAC + 30916646 30916668 9.0E-06 AAAAGAGAAAGGAGACGAAAAAC 23 V_TAACC_B_M00331 TRANSFAC + 30918743 30918765 1.0E-05 GAAAGCATTGGGTGACCAGAAAG 23 V_OBOX6_02_M03068 TRANSFAC + 30916686 30916700 4.0E-06 AAAAAAGGATTATGA 15 V_TCF3_05_M02920 TRANSFAC + 30916658 30916672 3.0E-06 AGACGAAAAACAAAA 15 V_SMAD1_01_M01590 TRANSFAC + 30916647 30916658 3.0E-06 AAAGAGAAAGGA 12 V_SMAD1_01_M01590 TRANSFAC + 30916663 30916674 3.0E-06 AAAAACAAAAAG 12 V_RFX1_02_M00281 TRANSFAC + 30917225 30917242 2.0E-06 CAGTTGTTAAAGCAACAT 18 V_PPARA_01_M00242 TRANSFAC + 30918008 30918027 9.0E-06 AAAGAACGGGAATAAGTTGT 20 V_NANOG_02_M01247 TRANSFAC + 30916643 30916662 3.0E-06 AAAAAAAGAGAAAGGAGACG 20 V_NANOG_02_M01247 TRANSFAC + 30916659 30916678 6.0E-06 GACGAAAAACAAAAAGAGCT 20 V_OTX3_01_M01403 TRANSFAC + 30916686 30916702 5.0E-06 AAAAAAGGATTATGACG 17

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.