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CHRNA6 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8973 cholinergic receptor, nicotinic, alpha 6 (neuronal) chr8 - 42623429 - 42628929 42623929 Transcription Factor Binding Sites   Download all TFBS in the CHRNA6 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints NFE2_bZIP_DBD_dimeric_11_1 SELEX + 42623799 42623809 2.0E-06 GATGAGTCATC 11 NFE2_bZIP_DBD_dimeric_11_1 SELEX - 42623799 42623809 0.0E+00 GATGACTCATC 11 FOXO4_forkhead_DBD_dimeric_14_1 SELEX + 42623086 42623099 4.0E-06 ACAAACATGATTAC 14 MESP1_bHLH_DBD_dimeric_10_1 SELEX + 42623902 42623911 1.0E-06 AACACCTGTG 10 Foxa2_MA0047.2 JASPAR - 42619916 42619927 1.0E-06 TGTTTACACTGT 12 SPIC_ETS_full_monomeric_14_1 SELEX + 42623844 42623857 1.0E-06 AGAAAGGGGAAGAA 14 POU3F3_POU_DBD_monomeric_12_1 SELEX - 42624070 42624081 4.0E-06 ATTCATATTTTA 12 FOXA1_MA0148.1 JASPAR - 42619917 42619927 1.0E-06 TGTTTACACTG 11 FOXO3_MA0157.1 JASPAR + 42619920 42619927 7.0E-06 TGTAAACA 8 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 42620058 42620069 7.0E-06 AGTTTTCCCACC 12 GRHL1_CP2_full_dimeric_12_1 SELEX - 42619997 42620008 6.0E-06 AGAACCAGTTTA 12 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX + 42623066 42623075 4.0E-06 ATCACGTGAT 10 Bhlhb2_bHLH_DBD_dimeric_10_1 SELEX - 42623066 42623075 4.0E-06 ATCACGTGAT 10 EWSR1-FLI1_MA0149.1 JASPAR - 42619206 42619223 3.0E-06 GGAAGCAAGGAAGGTCTG 18 EWSR1-FLI1_MA0149.1 JASPAR + 42623851 42623868 6.0E-06 GGAAGAAAAGCAGAAAAG 18 STAT1_MA0137.2 JASPAR + 42620014 42620028 1.0E-06 CACTTCCAGGAAAAA 15 STAT1_MA0137.2 JASPAR - 42620014 42620028 1.0E-06 TTTTTCCTGGAAGTG 15 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 42623402 42623413 5.0E-06 TATATTAATAAA 12 E2F7_E2F_DBD_dimeric_14_1 SELEX - 42620054 42620067 8.0E-06 TTTTCCCACCAATG 14 SPIB_ETS_DBD_monomeric_14_1 SELEX + 42623844 42623857 5.0E-06 AGAAAGGGGAAGAA 14 USF1_bHLH_DBD_dimeric_10_1 SELEX + 42623066 42623075 1.0E-06 ATCACGTGAT 10 USF1_bHLH_DBD_dimeric_10_1 SELEX - 42623066 42623075 1.0E-06 ATCACGTGAT 10 RFX2_RFX_DBD_dimeric_15_1 SELEX + 42623597 42623611 2.0E-06 TTTTCCTAGGCAAAG 15 E2F8_E2F_DBD_dimeric_12_1 SELEX - 42620055 42620066 1.0E-06 TTTCCCACCAAT 12 BHLHE41_bHLH_full_dimeric_10_1 SELEX + 42623066 42623075 3.0E-06 ATCACGTGAT 10 BHLHE41_bHLH_full_dimeric_10_1 SELEX - 42623066 42623075 3.0E-06 ATCACGTGAT 10 SREBF2_bHLH_DBD_dimeric_10_1 SELEX + 42623066 42623075 1.0E-06 ATCACGTGAT 10 SREBF2_bHLH_DBD_dimeric_10_1 SELEX - 42623066 42623075 1.0E-06 ATCACGTGAT 10 FOXI1_MA0042.1 JASPAR - 42623084 42623095 1.0E-06 TCATGTTTGTTT 12 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX + 42623066 42623075 6.0E-06 ATCACGTGAT 10 Bhlhb2_bHLH_DBD_monomeric_10_1 SELEX - 42623066 42623075 6.0E-06 ATCACGTGAT 10 Mafb_bZIP_DBD_dimeric_17_1 SELEX - 42623796 42623812 9.0E-06 TGTGATGACTCATCTGA 17 RFX3_RFX_DBD_dimeric_15_1 SELEX + 42623597 42623611 9.0E-06 TTTTCCTAGGCAAAG 15 Srebf1_bHLH_DBD_dimeric_10_1 SELEX + 42623066 42623075 1.0E-06 ATCACGTGAT 10 Srebf1_bHLH_DBD_dimeric_10_1 SELEX - 42623066 42623075 1.0E-06 ATCACGTGAT 10 TFEB_bHLH_full_dimeric_10_1 SELEX + 42623066 42623075 1.0E-06 ATCACGTGAT 10 TFEB_bHLH_full_dimeric_10_1 SELEX - 42623066 42623075 1.0E-06 ATCACGTGAT 10 TFCP2_CP2_full_dimeric_10_1 SELEX + 42619998 42620007 7.0E-06 AAACTGGTTC 10 MAFK_bZIP_DBD_dimeric_21_1 SELEX + 42623794 42623814 8.0E-06 TGTCAGATGAGTCATCACATT 21 MAFK_bZIP_DBD_dimeric_21_1 SELEX - 42623794 42623814 5.0E-06 AATGTGATGACTCATCTGACA 21 ZNF143_C2H2_DBD_monomeric_16_1 SELEX - 42619934 42619949 6.0E-06 CACCCATTATGCACCA 16 Stat3_MA0144.1 JASPAR - 42619235 42619244 7.0E-06 TTCTAGGAAG 10 Stat3_MA0144.1 JASPAR - 42620016 42620025 2.0E-06 TTCCTGGAAG 10 Stat3_MA0144.1 JASPAR + 42620017 42620026 1.0E-06 TTCCAGGAAA 10 MLXIPL_bHLH_full_dimeric_10_1 SELEX + 42623066 42623075 1.0E-06 ATCACGTGAT 10 MLXIPL_bHLH_full_dimeric_10_1 SELEX - 42623066 42623075 1.0E-06 ATCACGTGAT 10 POU3F1_POU_DBD_monomeric_12_2 SELEX - 42624070 42624081 6.0E-06 ATTCATATTTTA 12 FEV_MA0156.1 JASPAR - 42623812 42623819 1.0E-05 CAGGAAAT 8 MAFG_bZIP_full_dimeric_21_1 SELEX + 42623794 42623814 7.0E-06 TGTCAGATGAGTCATCACATT 21 MAFG_bZIP_full_dimeric_21_1 SELEX - 42623794 42623814 4.0E-06 AATGTGATGACTCATCTGACA 21 MAX_MA0058.1 JASPAR + 42623065 42623074 2.0E-06 AATCACGTGA 10 JDP2_bZIP_full_dimeric_9_1 SELEX + 42623800 42623808 4.0E-06 ATGAGTCAT 9 JDP2_bZIP_full_dimeric_9_1 SELEX - 42623800 42623808 2.0E-06 ATGACTCAT 9 TFE3_bHLH_DBD_dimeric_10_1 SELEX - 42623066 42623075 1.0E-06 ATCACGTGAT 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX + 42623066 42623075 1.0E-06 ATCACGTGAT 10 TFEC_bHLH_DBD_dimeric_10_1 SELEX - 42623066 42623075 1.0E-06 ATCACGTGAT 10 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 42623077 42623087 5.0E-06 TTTCCCCAAAC 11 CPEB1_RRM_full_monomeric_8_1 SELEX + 42623773 42623780 4.0E-06 AATAAAAA 8 FOXO3_forkhead_full_dimeric_14_1 SELEX + 42623086 42623099 3.0E-06 ACAAACATGATTAC 14 FOXO3_forkhead_full_dimeric_14_1 SELEX - 42623086 42623099 4.0E-06 GTAATCATGTTTGT 14 SPI1_ETS_full_monomeric_14_1 SELEX + 42623844 42623857 3.0E-06 AGAAAGGGGAAGAA 14 ETV6_ETS_full_dimeric_15_1 SELEX - 42619875 42619889 9.0E-06 GAGGAAATGGAAGCT 15 MLX_bHLH_full_dimeric_10_1 SELEX + 42623066 42623075 1.0E-06 ATCACGTGAT 10 MLX_bHLH_full_dimeric_10_1 SELEX - 42623066 42623075 1.0E-06 ATCACGTGAT 10 POU3F3_POU_DBD_dimeric_12_1 SELEX + 42624070 42624081 1.0E-05 TAAAATATGAAT 12 Sox2_MA0143.1 JASPAR + 42619986 42620000 7.0E-06 TCTTTGTTTCGTAAA 15 FOXO6_forkhead_DBD_dimeric_14_1 SELEX - 42623086 42623099 1.0E-06 GTAATCATGTTTGT 14 TCF3_bHLH_DBD_dimeric_10_1 SELEX + 42623902 42623911 4.0E-06 AACACCTGTG 10 FOXO1_forkhead_DBD_dimeric_14_1 SELEX + 42623086 42623099 8.0E-06 ACAAACATGATTAC 14 FOXO1_forkhead_DBD_dimeric_14_1 SELEX - 42623086 42623099 2.0E-06 GTAATCATGTTTGT 14 V_DMRT4_01_M01149 TRANSFAC - 42623014 42623026 3.0E-06 AAAGTTACAACTT 13 V_ELF5_03_M02057 TRANSFAC + 42620019 42620028 8.0E-06 CCAGGAAAAA 10 V_SPI1_01_M01203 TRANSFAC + 42623844 42623860 5.0E-06 AGAAAGGGGAAGAAAAG 17 V_STAT5A_Q6_M01890 TRANSFAC - 42620017 42620029 8.0E-06 GTTTTTCCTGGAA 13 V_STAT5A_Q6_M01890 TRANSFAC - 42623696 42623708 1.0E-06 TGATTTCTGAGAA 13 V_DBX1_01_M01483 TRANSFAC - 42623400 42623416 8.0E-06 AGATATATTAATAAAAG 17 V_BCL6_Q3_01_M02085 TRANSFAC + 42619235 42619244 2.0E-06 CTTCCTAGAA 10 V_BCL6_Q3_01_M02085 TRANSFAC + 42624065 42624074 5.0E-06 CTTTCTAAAA 10 V_FOXO3_02_M02270 TRANSFAC + 42619920 42619927 7.0E-06 TGTAAACA 8 V_BACH2_01_M00490 TRANSFAC + 42623799 42623809 1.0E-06 GATGAGTCATC 11 V_MAFK_03_M02776 TRANSFAC - 42623802 42623816 5.0E-06 GAAATGTGATGACTC 15 V_ACAAT_B_M00309 TRANSFAC + 42620054 42620062 8.0E-06 CATTGGTGG 9 V_ARNT_02_M00539 TRANSFAC + 42623061 42623080 0.0E+00 GCATAATCACGTGATGTTTC 20 V_ARNT_02_M00539 TRANSFAC - 42623061 42623080 0.0E+00 GAAACATCACGTGATTATGC 20 V_FOXD3_01_M00130 TRANSFAC - 42623084 42623095 9.0E-06 TCATGTTTGTTT 12 V_BCL6_01_M01183 TRANSFAC + 42624053 42624068 1.0E-06 CTTGTTAGAAAACTTT 16 V_BCL6_01_M01183 TRANSFAC - 42624061 42624076 1.0E-06 TATTTTAGAAAGTTTT 16 V_MAFB_05_M02775 TRANSFAC - 42623799 42623815 3.0E-06 AAATGTGATGACTCATC 17 V_GATA3_03_M00351 TRANSFAC + 42623034 42623043 4.0E-06 AATGATCTTA 10 V_STAT_Q6_M00777 TRANSFAC - 42620018 42620030 1.0E-05 TGTTTTTCCTGGA 13 V_IK_Q5_M01169 TRANSFAC - 42620074 42620083 3.0E-06 TTTGGGAGGC 10 V_NFAT3_Q3_M01734 TRANSFAC - 42620021 42620030 6.0E-06 TGTTTTTCCT 10 V_P50P50_Q3_M01223 TRANSFAC + 42623955 42623967 1.0E-05 AGGGGAATTCACT 13 V_ARNT_01_M00236 TRANSFAC + 42623063 42623078 0.0E+00 ATAATCACGTGATGTT 16 V_STAT5B_01_M00459 TRANSFAC + 42619233 42619247 7.0E-06 ATCTTCCTAGAATTT 15 V_STAT5B_01_M00459 TRANSFAC - 42619233 42619247 4.0E-06 AAATTCTAGGAAGAT 15 V_STAT5B_01_M00459 TRANSFAC - 42620014 42620028 2.0E-06 TTTTTCCTGGAAGTG 15 V_STAT5B_01_M00459 TRANSFAC - 42623693 42623707 9.0E-06 GATTTCTGAGAAGAC 15 V_PU1_Q4_M01172 TRANSFAC - 42623845 42623863 1.0E-06 CTGCTTTTCTTCCCCTTTC 19 V_LYF1_01_M00141 TRANSFAC - 42620075 42620083 9.0E-06 TTTGGGAGG 9 V_STAT4_Q4_M01666 TRANSFAC + 42620017 42620030 3.0E-06 TTCCAGGAAAAACA 14 V_STAT4_Q4_M01666 TRANSFAC - 42623691 42623704 7.0E-06 TTCTGAGAAGACAC 14 V_STAT4_Q4_M01666 TRANSFAC + 42623696 42623709 2.0E-06 TTCTCAGAAATCAA 14 V_AP1_Q6_M00174 TRANSFAC - 42623799 42623809 3.0E-06 GATGACTCATC 11 V_ELF4_04_M02850 TRANSFAC + 42623770 42623786 8.0E-06 GCGAATAAAAAAGATTC 17 V_BACH1_01_M00495 TRANSFAC + 42623797 42623811 1.0E-06 CAGATGAGTCATCAC 15 V_LMX1_01_M01409 TRANSFAC + 42623398 42623414 4.0E-06 AACTTTTATTAATATAT 17 V_HNF3G_Q4_M02015 TRANSFAC - 42623085 42623092 7.0E-06 TGTTTGTT 8 V_SREBP1_01_M00220 TRANSFAC + 42623065 42623075 1.0E-06 AATCACGTGAT 11 V_SREBP1_01_M00220 TRANSFAC - 42623066 42623076 0.0E+00 CATCACGTGAT 11 V_TEF_Q6_M00672 TRANSFAC - 42623403 42623414 7.0E-06 ATATATTAATAA 12 V_RSRFC4_Q2_M00407 TRANSFAC + 42623400 42623416 9.0E-06 CTTTTATTAATATATCT 17 V_AP1_Q6_01_M00925 TRANSFAC - 42623800 42623808 4.0E-06 ATGACTCAT 9 V_HOXA3_07_M02869 TRANSFAC - 42623404 42623417 4.0E-06 AAGATATATTAATA 14 V_HNF3A_01_M01261 TRANSFAC + 42619919 42619928 9.0E-06 GTGTAAACAG 10 V_E47_02_M00071 TRANSFAC - 42623899 42623914 0.0E+00 ACTCACAGGTGTTCAT 16 V_STAT5A_02_M00460 TRANSFAC + 42620017 42620040 9.0E-06 TTCCAGGAAAAACACTGCCTCACA 24 V_LEF1_03_M02878 TRANSFAC - 42623028 42623043 9.0E-06 TAAGATCATTCATTTT 16 V_TATA_C_M00216 TRANSFAC - 42622907 42622916 9.0E-06 GCTATAAAAT 10 V_USF_02_M00122 TRANSFAC + 42623064 42623077 1.0E-06 TAATCACGTGATGT 14 V_USF_02_M00122 TRANSFAC - 42623064 42623077 1.0E-06 ACATCACGTGATTA 14 V_JUNDM2_04_M02876 TRANSFAC + 42623796 42623811 6.0E-06 TCAGATGAGTCATCAC 16 V_JUNDM2_04_M02876 TRANSFAC - 42623797 42623812 1.0E-06 TGTGATGACTCATCTG 16 V_OCT1_04_M00138 TRANSFAC + 42623397 42623419 7.0E-06 AAACTTTTATTAATATATCTTCT 23 V_OCT1_04_M00138 TRANSFAC - 42624067 42624089 1.0E-06 AAATGAGGATTCATATTTTAGAA 23 V_USF_01_M00121 TRANSFAC + 42623064 42623077 5.0E-06 TAATCACGTGATGT 14 V_USF_01_M00121 TRANSFAC - 42623064 42623077 5.0E-06 ACATCACGTGATTA 14 V_RREB1_01_M00257 TRANSFAC + 42623080 42623093 1.0E-06 CCCCAAACAAACAT 14 V_AP1_C_M00199 TRANSFAC + 42623800 42623808 8.0E-06 ATGAGTCAT 9 V_AP1_C_M00199 TRANSFAC - 42624016 42624024 3.0E-06 ATGAGTCAG 9 V_STAT4_Q5_M02117 TRANSFAC + 42620017 42620026 7.0E-06 TTCCAGGAAA 10 V_STAT4_Q5_M02117 TRANSFAC + 42623696 42623705 9.0E-06 TTCTCAGAAA 10 V_ARID3A_04_M02735 TRANSFAC - 42623397 42623413 1.0E-05 TATATTAATAAAAGTTT 17 V_ARID3A_04_M02735 TRANSFAC + 42623398 42623414 1.0E-06 AACTTTTATTAATATAT 17 V_AP1_01_M00517 TRANSFAC + 42623798 42623810 2.0E-06 AGATGAGTCATCA 13 V_AP1_01_M00517 TRANSFAC - 42624014 42624026 1.0E-06 CCATGAGTCAGAA 13 V_TBP_06_M02814 TRANSFAC + 42623400 42623415 2.0E-06 CTTTTATTAATATATC 16 V_TBP_06_M02814 TRANSFAC + 42623402 42623417 5.0E-06 TTTATTAATATATCTT 16 V_STAT3_03_M01595 TRANSFAC + 42620015 42620030 1.0E-06 ACTTCCAGGAAAAACA 16 V_BLIMP1_Q6_M01066 TRANSFAC - 42619965 42619980 1.0E-06 AGGGGAGTGAAAGGGA 16 V_IRF7_01_M00453 TRANSFAC - 42619872 42619889 9.0E-06 GAGGAAATGGAAGCTCAG 18 V_AP1_Q4_01_M00926 TRANSFAC + 42623801 42623808 1.0E-05 TGAGTCAT 8 V_MTF1_06_M02882 TRANSFAC - 42623401 42623414 2.0E-06 ATATATTAATAAAA 14 V_STRA13_01_M00985 TRANSFAC - 42623064 42623077 5.0E-06 ACATCACGTGATTA 14 V_TFEB_01_M01768 TRANSFAC + 42623066 42623075 1.0E-06 ATCACGTGAT 10 V_TFEB_01_M01768 TRANSFAC - 42623066 42623075 1.0E-06 ATCACGTGAT 10 V_MAX_01_M00119 TRANSFAC + 42623064 42623077 5.0E-06 TAATCACGTGATGT 14 V_MAX_01_M00119 TRANSFAC - 42623064 42623077 5.0E-06 ACATCACGTGATTA 14 V_ZBTB3_03_M02825 TRANSFAC + 42623671 42623687 2.0E-06 AAGCCCACTGCAATCCG 17 V_FOXL1_02_M02857 TRANSFAC + 42623703 42623718 3.0E-06 AAATCAAAACATCCCC 16 V_PARP_Q3_M01211 TRANSFAC - 42623595 42623604 8.0E-06 TAGGAAAAAG 10 V_XBP1_01_M00251 TRANSFAC + 42623063 42623079 5.0E-06 ATAATCACGTGATGTTT 17 V_LMX1B_01_M01363 TRANSFAC + 42623397 42623413 8.0E-06 AAACTTTTATTAATATA 17 V_LMX1B_01_M01363 TRANSFAC - 42623398 42623414 3.0E-06 ATATATTAATAAAAGTT 17 V_FRA1_Q5_M01267 TRANSFAC + 42623801 42623808 1.0E-05 TGAGTCAT 8 V_NRF2_Q4_M00821 TRANSFAC + 42623797 42623809 1.0E-05 CAGATGAGTCATC 13 V_MYB_Q3_M00773 TRANSFAC + 42620040 42620050 4.0E-06 ACAGACAGTTA 11 V_FOXA2_03_M02260 TRANSFAC - 42619916 42619927 1.0E-06 TGTTTACACTGT 12 V_STAT5A_01_M00457 TRANSFAC - 42619233 42619247 5.0E-06 AAATTCTAGGAAGAT 15 V_STAT5A_01_M00457 TRANSFAC - 42620014 42620028 8.0E-06 TTTTTCCTGGAAGTG 15 V_SOX2_01_M02246 TRANSFAC + 42619986 42620000 7.0E-06 TCTTTGTTTCGTAAA 15 V_E2F_01_M00024 TRANSFAC + 42620056 42620070 3.0E-06 TTGGTGGGAAAACTG 15 V_HFH3_01_M00289 TRANSFAC - 42623083 42623095 2.0E-06 TCATGTTTGTTTG 13 V_EWSR1FLI1_01_M02252 TRANSFAC - 42619206 42619223 3.0E-06 GGAAGCAAGGAAGGTCTG 18 V_EWSR1FLI1_01_M02252 TRANSFAC + 42623851 42623868 6.0E-06 GGAAGAAAAGCAGAAAAG 18 V_NFE2_Q6_M02104 TRANSFAC - 42623794 42623809 4.0E-06 GATGACTCATCTGACA 16 V_SMAD3_Q6_M00701 TRANSFAC - 42623755 42623763 1.0E-05 TGTCTGCCT 9 V_NFE2_01_M00037 TRANSFAC + 42623798 42623808 8.0E-06 AGATGAGTCAT 11 V_NFE2_01_M00037 TRANSFAC - 42623800 42623810 6.0E-06 TGATGACTCAT 11 V_CMAF_01_M01070 TRANSFAC - 42623797 42623815 3.0E-06 AAATGTGATGACTCATCTG 19 V_ZFP128_04_M02932 TRANSFAC - 42623402 42623415 9.0E-06 GATATATTAATAAA 14 V_SOX5_04_M02910 TRANSFAC - 42624067 42624081 2.0E-06 ATTCATATTTTAGAA 15 V_TCF3_05_M02920 TRANSFAC + 42623768 42623782 1.0E-06 GGGCGAATAAAAAAG 15 V_FEV_01_M02269 TRANSFAC - 42623812 42623819 1.0E-05 CAGGAAAT 8 V_STAT1_Q6_M01823 TRANSFAC + 42620017 42620026 2.0E-06 TTCCAGGAAA 10 V_GLIS2_04_M02863 TRANSFAC - 42623400 42623413 0.0E+00 TATATTAATAAAAG 14 V_GLIS2_04_M02863 TRANSFAC + 42623402 42623415 2.0E-06 TTTATTAATATATC 14 V_STAT1_05_M01260 TRANSFAC - 42619226 42619247 5.0E-06 AAATTCTAGGAAGATGCAGGCT 22 V_STAT1_05_M01260 TRANSFAC - 42620007 42620028 0.0E+00 TTTTTCCTGGAAGTGCTTTGAG 22 V_STAT1_05_M01260 TRANSFAC + 42620014 42620035 8.0E-06 CACTTCCAGGAAAAACACTGCC 22 V_PAX4_04_M00380 TRANSFAC + 42624061 42624090 3.0E-06 AAAACTTTCTAAAATATGAATCCTCATTTC 30

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