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H1FX Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8971 H1 histone family, member X chr3 - 129034620 - 129040120 129035120 Transcription Factor Binding Sites   Download all TFBS in the H1FX promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXJ2_forkhead_DBD_dimeric_13_1 SELEX + 129034051 129034063 1.0E-06 AAAAACAAAAACA 13 HINFP1_C2H2_full_dimeric_19_1 SELEX - 129034345 129034363 7.0E-06 GCGGAGCCCCGGCGGCCGC 19 TBX1_TBX_DBD_dimeric_20_2 SELEX + 129031183 129031202 1.0E-05 GTCACTCCTTTGAGTGAGAG 20 SPIC_ETS_full_monomeric_14_1 SELEX - 129034633 129034646 2.0E-06 AAGAAGAGGAAGAA 14 FOXA1_MA0148.1 JASPAR - 129033912 129033922 5.0E-06 TGTTTGCTTTA 11 FOXG1_forkhead_DBD_dimeric_17_1 SELEX + 129033916 129033932 3.0E-06 GCAAACAACGAAAAACG 17 RFX4_RFX_DBD_dimeric_16_1 SELEX + 129033841 129033856 1.0E-06 AGTAACCATGACGACG 16 RFX4_RFX_DBD_dimeric_16_1 SELEX - 129033841 129033856 2.0E-06 CGTCGTCATGGTTACT 16 TBP_MA0108.2 JASPAR - 129035147 129035161 0.0E+00 CTATAAAAAGCCGAG 15 NFYA_MA0060.1 JASPAR + 129033098 129033113 5.0E-06 CTTAACCAATAGGCTC 16 ISL2_homeodomain_DBD_monomeric_8_1 SELEX - 129031706 129031713 1.0E-05 GCACTTAA 8 NKX3-2_homeodomain_DBD_monomeric_9_1 SELEX - 129031706 129031714 7.0E-06 AGCACTTAA 9 Pax4_MA0068.1 JASPAR + 129034050 129034079 5.0E-06 GAAAAACAAAAACACCGAAAAGCCCACGCC 30 SPIB_ETS_DBD_monomeric_14_1 SELEX - 129034633 129034646 1.0E-05 AAGAAGAGGAAGAA 14 Klf4_MA0039.2 JASPAR - 129036051 129036060 1.0E-05 AGGGTGGGGC 10 REL_MA0101.1 JASPAR + 129035636 129035645 9.0E-06 GGGGTTTTCC 10 HMX3_homeodomain_DBD_monomeric_11_1 SELEX - 129031704 129031714 3.0E-06 AGCACTTAAAA 11 Rfx3_RFX_DBD_dimeric_16_1 SELEX - 129033841 129033856 6.0E-06 CGTCGTCATGGTTACT 16 SP1_MA0079.2 JASPAR - 129033943 129033952 3.0E-06 CCCCTCCCCC 10 SP1_MA0079.2 JASPAR + 129035973 129035982 3.0E-06 CCCCTCCCCC 10 FOXC2_forkhead_DBD_dimeric_11_1 SELEX + 129034051 129034061 8.0E-06 AAAAACAAAAA 11 RFX2_RFX_DBD_dimeric_16_1 SELEX + 129033841 129033856 2.0E-06 AGTAACCATGACGACG 16 RFX2_RFX_DBD_dimeric_16_1 SELEX - 129033841 129033856 4.0E-06 CGTCGTCATGGTTACT 16 NKX2-3_homeodomain_full_monomeric_10_1 SELEX - 129031705 129031714 4.0E-06 AGCACTTAAA 10 MAX_MA0058.1 JASPAR - 129035590 129035599 4.0E-06 GACCACGTGA 10 RORA_nuclearreceptor_DBD_dimeric_20_1 SELEX + 129033280 129033299 8.0E-06 TGGAGGCCAAGTTTAGGTCC 20 HMX2_homeodomain_DBD_monomeric_11_1 SELEX - 129031704 129031714 2.0E-06 AGCACTTAAAA 11 FOXC1_forkhead_DBD_dimeric_13_1 SELEX + 129034049 129034061 3.0E-06 AGAAAAACAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 129034051 129034063 0.0E+00 AAAAACAAAAACA 13 ZNF784_C2H2_full_monomeric_10_1 SELEX - 129034480 129034489 3.0E-06 GCACCTACCT 10 HMX1_homeodomain_DBD_monomeric_11_1 SELEX - 129031704 129031714 3.0E-06 AGCACTTAAAA 11 V_FOXP1_01_M00987 TRANSFAC - 129034051 129034070 1.0E-06 TTTTCGGTGTTTTTGTTTTT 20 V_HNF3B_01_M00131 TRANSFAC - 129033913 129033927 7.0E-06 TTCGTTGTTTGCTTT 15 V_AP1_Q2_M00173 TRANSFAC + 129033228 129033238 3.0E-06 AATGACTAAGT 11 V_GEN_INI_B_M00315 TRANSFAC + 129035818 129035825 1.0E-05 CCTCATTT 8 V_TCF3_01_M01594 TRANSFAC - 129034049 129034061 1.0E-06 TTTTTGTTTTTCT 13 V_EBF_Q6_M00977 TRANSFAC - 129033407 129033417 7.0E-06 GTCCCTTAGGA 11 V_MAX_Q6_M01830 TRANSFAC - 129035590 129035601 5.0E-06 CCGACCACGTGA 12 V_HNF1_02_M01379 TRANSFAC + 129033093 129033109 3.0E-06 TCTAGCTTAACCAATAG 17 V_NFY_Q6_M00185 TRANSFAC + 129033100 129033110 8.0E-06 TAACCAATAGG 11 V_ZFX_01_M01593 TRANSFAC + 129033991 129034006 2.0E-06 GACCAGGCCTCGCGGC 16 V_PAX4_03_M00378 TRANSFAC + 129033470 129033481 1.0E-06 AATTCCCACCCC 12 V_ACAAT_B_M00309 TRANSFAC + 129034757 129034765 8.0E-06 GATTGGTGG 9 V_HMGIY_Q3_M01010 TRANSFAC + 129036827 129036841 3.0E-06 ATGTGAATTTCCTGA 15 V_MAFB_03_M02879 TRANSFAC - 129032793 129032807 4.0E-06 AAATTGCAGAAACTA 15 V_CEBP_C_M00201 TRANSFAC + 129035819 129035836 5.0E-06 CTCATTTTGTAATCCACA 18 V_PLAG1_02_M01973 TRANSFAC + 129035444 129035459 2.0E-06 CCCCAGAGGAGGCCCC 16 V_HNF3_Q6_01_M01012 TRANSFAC - 129033910 129033927 2.0E-06 TTCGTTGTTTGCTTTAGG 18 V_SP1_03_M02281 TRANSFAC - 129033943 129033952 3.0E-06 CCCCTCCCCC 10 V_SP1_03_M02281 TRANSFAC + 129035973 129035982 3.0E-06 CCCCTCCCCC 10 V_GKLF_02_M01588 TRANSFAC + 129036051 129036062 5.0E-06 GCCCCACCCTCC 12 V_AREB6_04_M00415 TRANSFAC + 129033898 129033906 8.0E-06 CTGTTTCAA 9 V_CACCCBINDINGFACTOR_Q6_M00721 TRANSFAC - 129035787 129035802 3.0E-06 CGGCAACAGGGTGGGG 16 V_PU1_Q4_M01172 TRANSFAC + 129034627 129034645 8.0E-06 TTGCTATTCTTCCTCTTCT 19 V_BARBIE_01_M00238 TRANSFAC - 129035145 129035159 2.0E-06 ATAAAAAGCCGAGAG 15 V_AP1_Q6_M00174 TRANSFAC + 129033228 129033238 5.0E-06 AATGACTAAGT 11 V_TRF1_01_M01237 TRANSFAC - 129033203 129033217 1.0E-05 CGAGGGTTAGAGTGA 15 V_ZNF219_01_M01122 TRANSFAC + 129035783 129035794 2.0E-06 CTCCCCCCACCC 12 V_ROAZ_01_M00467 TRANSFAC + 129035381 129035394 1.0E-06 GCACCCTAGGCTGC 14 V_ROAZ_01_M00467 TRANSFAC - 129035381 129035394 1.0E-06 GCAGCCTAGGGTGC 14 V_GEN_INI3_B_M00314 TRANSFAC + 129035818 129035825 1.0E-05 CCTCATTT 8 V_FOXA2_02_M02853 TRANSFAC + 129035568 129035582 1.0E-05 CAAACTAACACAGGG 15 V_HIC1_06_M02867 TRANSFAC + 129033632 129033647 0.0E+00 TATTGTGCCCAAAAAA 16 V_TATA_01_M00252 TRANSFAC - 129035147 129035161 0.0E+00 CTATAAAAAGCCGAG 15 V_CREL_01_M00053 TRANSFAC + 129035636 129035645 9.0E-06 GGGGTTTTCC 10 V_ZBP89_Q4_M01816 TRANSFAC - 129033942 129033951 4.0E-06 CCCTCCCCCA 10 V_AP1_Q6_01_M00925 TRANSFAC - 129031601 129031609 2.0E-06 ATGACTCAA 9 V_AP1_Q4_M00188 TRANSFAC + 129033228 129033238 1.0E-06 AATGACTAAGT 11 V_SP1_Q6_M00196 TRANSFAC - 129035971 129035983 8.0E-06 AGGGGGAGGGGTG 13 V_FOXK1_04_M02856 TRANSFAC + 129035182 129035196 6.0E-06 AGAACAACAACAGCC 15 V_HNF3A_01_M01261 TRANSFAC + 129033914 129033923 7.0E-06 AAGCAAACAA 10 V_AP2BETA_Q3_M01858 TRANSFAC + 129035516 129035531 4.0E-06 GTCCCGGCCCGGGGGG 16 V_HNF3_Q6_M00791 TRANSFAC + 129034051 129034063 9.0E-06 AAAAACAAAAACA 13 V_HNF3ALPHA_Q6_M00724 TRANSFAC - 129033912 129033922 1.0E-06 TGTTTGCTTTA 11 V_MATH1_Q2_M01716 TRANSFAC - 129034590 129034599 3.0E-06 CCAGCTGGTG 10 V_TATA_C_M00216 TRANSFAC - 129035153 129035162 3.0E-06 GCTATAAAAA 10 V_JUNDM2_04_M02876 TRANSFAC - 129031176 129031191 4.0E-06 AGGAGTGACTCACCTA 16 V_NFE4_Q5_M02105 TRANSFAC - 129036035 129036046 6.0E-06 GACCCTCTCCAG 12 V_PPARG_03_M00528 TRANSFAC - 129032973 129032989 5.0E-06 AGTTGGGCAATAGGTCA 17 V_TAL1BETAE47_01_M00065 TRANSFAC - 129032949 129032964 9.0E-06 TCTAACAGATGTCCCT 16 V_MEF2_04_M00233 TRANSFAC - 129032936 129032957 6.0E-06 GATGTCCCTAAAAATGGACAAC 22 V_RREB1_01_M00257 TRANSFAC - 129030925 129030938 3.0E-06 CCACAACCAACCAC 14 V_MEF2_Q6_01_M00941 TRANSFAC + 129035150 129035161 8.0E-06 GGCTTTTTATAG 12 V_PAX3_01_M00360 TRANSFAC - 129033842 129033854 7.0E-06 TCGTCATGGTTAC 13 V_MZF1_02_M00084 TRANSFAC + 129033943 129033955 3.0E-06 GGGGGAGGGGAAA 13 V_NKX23_01_M01457 TRANSFAC - 129034467 129034482 4.0E-06 CCTCAAGTACTCGATC 16 V_FOXO1_Q5_M01216 TRANSFAC + 129034051 129034059 1.0E-06 AAAAACAAA 9 V_NKX32_02_M01482 TRANSFAC - 129031702 129031718 8.0E-06 CAAGAGCACTTAAAAGG 17 V_MAF_Q6_01_M00983 TRANSFAC + 129031599 129031609 6.0E-06 TCTTGAGTCAT 11 V_TAL1BETAITF2_01_M00070 TRANSFAC - 129032949 129032964 3.0E-06 TCTAACAGATGTCCCT 16 V_BCL6B_04_M02844 TRANSFAC + 129035640 129035655 6.0E-06 TTTTCCGCCCCATCCA 16 V_ELF1_Q6_M00746 TRANSFAC - 129034634 129034645 2.0E-06 AGAAGAGGAAGA 12 V_USF_Q6_01_M00796 TRANSFAC - 129035588 129035599 9.0E-06 GACCACGTGAGG 12 V_GCNF_01_M00526 TRANSFAC - 129032965 129032982 8.0E-06 CAATAGGTCAAGGTCTAT 18 V_MAZR_01_M00491 TRANSFAC + 129033943 129033955 1.0E-05 GGGGGAGGGGAAA 13 V_CNOT3_01_M01253 TRANSFAC + 129034290 129034299 8.0E-06 GGCCGCGCCC 10 V_CNOT3_01_M01253 TRANSFAC + 129034789 129034798 4.0E-06 GGCCGCGCCG 10 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 129033723 129033731 8.0E-06 GAGGGTGGG 9 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 129036053 129036061 8.0E-06 GAGGGTGGG 9 V_CAAT_C_M00200 TRANSFAC - 129031570 129031594 6.0E-06 GCCAATAAGTGTTCAGTCTGTTATT 25 V_TAL1ALPHAE47_01_M00066 TRANSFAC - 129032949 129032964 3.0E-06 TCTAACAGATGTCCCT 16 V_LUN1_01_M00480 TRANSFAC + 129033438 129033454 1.0E-06 TCCCAGGTACTTTAAGT 17 V_E2F3_03_M02743 TRANSFAC + 129035576 129035590 9.0E-06 CACAGGGCGCGCCCT 15 V_E2F3_03_M02743 TRANSFAC - 129035579 129035593 3.0E-06 GTGAGGGCGCGCCCT 15 V_GEN_INI2_B_M00313 TRANSFAC + 129035818 129035825 1.0E-05 CCTCATTT 8 V_TCF1_06_M02815 TRANSFAC + 129033093 129033109 6.0E-06 TCTAGCTTAACCAATAG 17 V_NFY_01_M00287 TRANSFAC + 129033098 129033113 9.0E-06 CTTAACCAATAGGCTC 16 V_PADS_C_M00211 TRANSFAC - 129033135 129033143 4.0E-06 TGTGGTCTC 9 V_FOXO3_01_M00477 TRANSFAC - 129034048 129034061 7.0E-06 TTTTTGTTTTTCTA 14 V_ASCL2_04_M02841 TRANSFAC - 129031066 129031081 7.0E-06 CCTTCCCCTCCCTTTT 16 V_ASCL2_04_M02841 TRANSFAC + 129035783 129035798 4.0E-06 CTCCCCCCACCCTGTT 16 V_FOX_Q2_M00809 TRANSFAC - 129033913 129033925 7.0E-06 CGTTGTTTGCTTT 13 V_RSRFC4_01_M00026 TRANSFAC + 129035149 129035164 8.0E-06 CGGCTTTTTATAGCTT 16 V_ZFP281_01_M01597 TRANSFAC + 129033942 129033952 1.0E-06 TGGGGGAGGGG 11 V_ZFP281_01_M01597 TRANSFAC - 129035973 129035983 3.0E-06 AGGGGGAGGGG 11 V_R_01_M00273 TRANSFAC - 129035414 129035434 0.0E+00 TTGGCCTCCAAACGAGGTGCC 21 V_ZFP281_04_M02831 TRANSFAC - 129033940 129033954 1.0E-06 TTCCCCTCCCCCAAC 15 V_SRF_06_M02916 TRANSFAC + 129034046 129034062 3.0E-06 GGTAGAAAAACAAAAAC 17 V_SRF_06_M02916 TRANSFAC + 129034047 129034063 3.0E-06 GTAGAAAAACAAAAACA 17 V_E2F_01_M00024 TRANSFAC - 129033057 129033071 8.0E-06 TTGCTGGGAAAATTA 15 V_FOXJ2_01_M00422 TRANSFAC + 129033910 129033927 5.0E-06 CCTAAAGCAAACAACGAA 18 V_ZIC3_04_M02837 TRANSFAC + 129036058 129036072 1.0E-06 CCTCCCCGGGGGGGC 15 V_ZIC1_04_M02835 TRANSFAC + 129036058 129036071 3.0E-06 CCTCCCCGGGGGGG 14 V_ZIC1_04_M02835 TRANSFAC - 129036058 129036071 3.0E-06 CCCCCCCGGGGAGG 14 V_ZIC1_04_M02835 TRANSFAC + 129036059 129036072 4.0E-06 CTCCCCGGGGGGGC 14 V_NFE2_Q6_M02104 TRANSFAC - 129031173 129031188 8.0E-06 AGTGACTCACCTAACC 16 V_EKLF_Q5_M01874 TRANSFAC + 129035787 129035796 9.0E-06 CCCCACCCTG 10 V_SOX2_Q6_M01272 TRANSFAC - 129034050 129034065 6.0E-06 GGTGTTTTTGTTTTTC 16 V_HNF3B_Q6_M02014 TRANSFAC - 129033915 129033923 6.0E-06 TTGTTTGCT 9 V_IRF1_01_M00062 TRANSFAC + 129034050 129034062 4.0E-06 GAAAAACAAAAAC 13 V_FREAC4_01_M00292 TRANSFAC + 129033911 129033926 8.0E-06 CTAAAGCAAACAACGA 16 V_MEF2A_05_M01301 TRANSFAC - 129035152 129035163 9.0E-06 AGCTATAAAAAG 12 V_UF1H3BETA_Q6_M01068 TRANSFAC + 129033940 129033953 0.0E+00 GTTGGGGGAGGGGA 14 V_LPOLYA_B_M00318 TRANSFAC - 129033629 129033636 7.0E-06 CAATAAAG 8 V_CMAF_01_M01070 TRANSFAC - 129033110 129033128 9.0E-06 GTATTTGCTGTCTCTGAGC 19 V_SP1_Q4_01_M00932 TRANSFAC - 129035971 129035983 8.0E-06 AGGGGGAGGGGTG 13 V_CEBPE_01_M01772 TRANSFAC + 129035822 129035831 8.0E-06 ATTTTGTAAT 10 V_ZIC2_04_M02836 TRANSFAC - 129036057 129036071 3.0E-06 CCCCCCCGGGGAGGG 15 V_ZIC2_04_M02836 TRANSFAC + 129036058 129036072 3.0E-06 CCTCCCCGGGGGGGC 15 V_BRCA_01_M01082 TRANSFAC - 129031216 129031223 1.0E-05 TTCTGTTG 8 V_CEBPG_Q6_01_M01869 TRANSFAC - 129035821 129035832 0.0E+00 GATTACAAAATG 12 V_PAX4_04_M00380 TRANSFAC + 129034050 129034079 3.0E-06 GAAAAACAAAAACACCGAAAAGCCCACGCC 30 V_SMAD1_01_M01590 TRANSFAC + 129034051 129034062 2.0E-06 AAAAACAAAAAC 12 V_SMAD1_01_M01590 TRANSFAC - 129034197 129034208 3.0E-06 AAGGACAAAGGC 12 V_NANOG_02_M01247 TRANSFAC + 129034047 129034066 0.0E+00 GTAGAAAAACAAAAACACCG 20 V_ER_Q6_M00191 TRANSFAC + 129032962 129032980 7.0E-06 AGAATAGACCTTGACCTAT 19

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.