Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

FAM127A Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8933 family with sequence similarity 127, member A chrX + 134161332 - 134166832 134166332 Transcription Factor Binding Sites   Download all TFBS in the FAM127A promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints Foxk1_forkhead_DBD_putatively-multimeric_11_1 SELEX + 134164653 134164663 5.0E-06 GGGACACAATA 11 Foxj3_forkhead_DBD_putatively-multimeric_11_1 SELEX + 134164652 134164662 2.0E-06 AGGGACACAAT 11 ZNF435_C2H2_full_dimeric_18_1 SELEX + 134165927 134165944 4.0E-06 TGTGTTCACAGAACCTCA 18 GLI2_C2H2_DBD_monomeric_14_1 SELEX + 134167079 134167092 8.0E-06 GACCACCCACTGCC 14 FOXK1_forkhead_DBD_putatively-multimeric_10_1 SELEX + 134164653 134164662 4.0E-06 GGGACACAAT 10 Egr1_C2H2_mouse-DBD_mutant_DBD_monomeric_16_1 SELEX + 134166296 134166311 7.0E-06 CCCCGCCCACCCAAGC 16 RFX2_RFX_DBD_dimeric_15_1 SELEX - 134164686 134164700 8.0E-06 CTTTCCTAGGCAGAG 15 FOXG1_forkhead_DBD_putatively-multimeric_12_1 SELEX + 134164652 134164663 4.0E-06 AGGGACACAATA 12 SP4_C2H2_full_monomeric_17_1 SELEX + 134166292 134166308 2.0E-06 GTGGCCCCGCCCACCCA 17 SP1_C2H2_DBD_monomeric_11_1 SELEX + 134166295 134166305 1.0E-05 GCCCCGCCCAC 11 Tp53_p53l_DBD_dimeric_17_1 SELEX - 134164789 134164805 7.0E-06 ACAGGCCCTTTACAGGT 17 V_GLI1_Q2_M01042 TRANSFAC + 134167079 134167088 4.0E-06 GACCACCCAC 10 V_GLI1_01_M01702 TRANSFAC + 134166300 134166310 1.0E-05 GCCCACCCAAG 11 V_GLI1_01_M01702 TRANSFAC + 134167079 134167089 2.0E-06 GACCACCCACT 11 V_AP2_Q6_01_M00915 TRANSFAC - 134166771 134166783 0.0E+00 CCGCCCCCAGGCC 13 V_STAT5B_01_M00459 TRANSFAC - 134166919 134166933 9.0E-06 CTATTCCTGGAACAA 15 V_GKLF_02_M01588 TRANSFAC + 134166295 134166306 8.0E-06 GCCCCGCCCACC 12 V_TR4_Q2_M01725 TRANSFAC + 134166356 134166366 7.0E-06 ACTGACCTCTG 11 V_GLI3_02_M01704 TRANSFAC + 134166300 134166310 9.0E-06 GCCCACCCAAG 11 V_GLI3_02_M01704 TRANSFAC + 134167079 134167089 2.0E-06 GACCACCCACT 11 V_ZIC3_01_M00450 TRANSFAC - 134167079 134167087 6.0E-06 TGGGTGGTC 9 V_SP1_Q6_M00196 TRANSFAC - 134166294 134166306 3.0E-06 GGTGGGCGGGGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC - 134167105 134167118 0.0E+00 TGGGGAGGAGAGGG 14 V_STAT5A_02_M00460 TRANSFAC - 134165916 134165939 7.0E-06 TTCTGTGAACACATTTTCCTGCTG 24 V_NKX22_02_M01372 TRANSFAC - 134164637 134164653 5.0E-06 CTGGGTACTTGAGATTA 17 V_ASCL2_03_M02737 TRANSFAC - 134166423 134166439 1.0E-05 TTTATCAGCTGCACCCG 17 V_SOX12_04_M02900 TRANSFAC + 134169350 134169365 0.0E+00 AAAGGGACAAAGGAAT 16 V_ZIC1_01_M00448 TRANSFAC - 134167079 134167087 6.0E-06 TGGGTGGTC 9 V_BLIMP1_Q6_M01066 TRANSFAC - 134166488 134166503 4.0E-06 GGGAAAGGGAATCGGG 16 V_GLI3_Q5_01_M01657 TRANSFAC - 134167080 134167088 6.0E-06 GTGGGTGGT 9 V_GLI3_01_M01596 TRANSFAC - 134167078 134167088 1.0E-06 GTGGGTGGTCT 11 V_SP4_Q5_M01273 TRANSFAC + 134166295 134166305 9.0E-06 GCCCCGCCCAC 11 V_GLI2_01_M01703 TRANSFAC + 134166300 134166310 6.0E-06 GCCCACCCAAG 11 V_GLI2_01_M01703 TRANSFAC + 134167079 134167089 3.0E-06 GACCACCCACT 11 V_LUN1_01_M00480 TRANSFAC + 134167012 134167028 6.0E-06 TCCCATGTACATTTGGA 17 V_FPM315_01_M01587 TRANSFAC - 134166118 134166129 7.0E-06 CGGGGAGCAGGA 12 V_P63_01_M01656 TRANSFAC + 134166550 134166569 6.0E-06 AGACGGGCTCCTACATGTTC 20 V_P63_01_M01656 TRANSFAC - 134166550 134166569 8.0E-06 GAACATGTAGGAGCCCGTCT 20 V_LXRA_RXRA_Q3_M00647 TRANSFAC - 134166353 134166367 3.0E-06 GCAGAGGTCAGTACC 15 V_SOX4_01_M01308 TRANSFAC - 134166916 134166923 1.0E-05 AACAAAGG 8 V_GLI_Q2_M01037 TRANSFAC - 134167078 134167089 2.0E-06 AGTGGGTGGTCT 12 V_SP1_Q4_01_M00932 TRANSFAC - 134166294 134166306 2.0E-06 GGTGGGCGGGGCC 13 V_ZIC2_01_M00449 TRANSFAC - 134167079 134167087 6.0E-06 TGGGTGGTC 9 V_SOX9_Q4_M01284 TRANSFAC - 134166914 134166924 4.0E-06 GAACAAAGGCA 11 V_NANOG_02_M01247 TRANSFAC + 134169348 134169367 6.0E-06 ATAAAGGGACAAAGGAATGG 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.