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TIMELESS Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8914 timeless circadian clock chr12 - 56842700 - 56848200 56843200 Transcription Factor Binding Sites   Download all TFBS in the TIMELESS promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints FOXB1_forkhead_DBD_dimeric_18_1 SELEX + 56846332 56846349 4.0E-06 ATAACCAATATTTATTGA 18 FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 56846332 56846349 2.0E-06 TCAATAAATATTGGTTAT 18 TBX20_TBX_full_monomeric_11_1 SELEX - 56846398 56846408 1.0E-05 AATGTGTGAAA 11 MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 56843360 56843377 6.0E-06 AGAATCAAAGTCCGATTA 18 SPIC_ETS_full_monomeric_14_1 SELEX - 56843396 56843409 5.0E-06 AAGAAGGGGAAGAA 14 TBR1_TBX_DBD_monomeric_10_1 SELEX - 56846398 56846407 3.0E-06 ATGTGTGAAA 10 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 56842970 56842980 1.0E-05 GCCCCGCCCCC 11 EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 56846287 56846300 8.0E-06 TAATTTAAAAATTT 14 TBX20_TBX_DBD_dimeric_19_1 SELEX - 56846389 56846407 5.0E-06 ATGTGTGAAAGTTATATGT 19 TBX19_TBX_DBD_dimeric_20_1 SELEX + 56842750 56842769 7.0E-06 GGTCTCAACTAGATGCTAAG 20 TBX19_TBX_DBD_dimeric_20_1 SELEX - 56842750 56842769 7.0E-06 CTTAGCATCTAGTTGAGACC 20 EWSR1-FLI1_MA0149.1 JASPAR + 56843263 56843280 2.0E-06 GTGAAGAAGGAAGGAAAA 18 POU1F1_POU_DBD_monomeric_14_1 SELEX - 56846297 56846310 9.0E-06 CATATGGAAATAAT 14 POU2F2_POU_DBD_monomeric_11_1 SELEX - 56846299 56846309 6.0E-06 ATATGGAAATA 11 FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 56846334 56846347 3.0E-06 AACCAATATTTATT 14 FOXD2_forkhead_DBD_dimeric_14_1 SELEX - 56846334 56846347 1.0E-06 AATAAATATTGGTT 14 Pax4_MA0068.1 JASPAR - 56846265 56846294 0.0E+00 AAAAATTTTTCAAAGCTGTACACCCATTTT 30 Spz1_MA0111.1 JASPAR - 56845934 56845944 6.0E-06 AGAGTTACAGC 11 EOMES_TBX_DBD_monomeric_13_1 SELEX - 56846396 56846408 3.0E-06 AATGTGTGAAAGT 13 Ar_MA0007.1 JASPAR - 56842787 56842808 4.0E-06 ATTAGAACAGAAAGTGCCTGAG 22 FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 56846334 56846347 6.0E-06 AACCAATATTTATT 14 FOXD3_forkhead_DBD_dimeric_14_1 SELEX - 56846334 56846347 2.0E-06 AATAAATATTGGTT 14 POU6F2_POU_DBD_dimeric_16_1 SELEX + 56843435 56843450 4.0E-06 TTAAATAGTTAGTTAG 16 POU6F2_POU_DBD_dimeric_16_1 SELEX - 56843435 56843450 5.0E-06 CTAACTAACTATTTAA 16 BHLHE22_bHLH_DBD_dimeric_12_1 SELEX - 56846302 56846313 5.0E-06 AAACATATGGAA 12 SP1_MA0079.2 JASPAR + 56842971 56842980 7.0E-06 CCCCGCCCCC 10 TBR1_TBX_full_monomeric_11_1 SELEX - 56846398 56846408 2.0E-06 AATGTGTGAAA 11 Gfi_MA0038.1 JASPAR + 56843322 56843331 3.0E-06 AAAATCACAG 10 FOXC1_forkhead_DBD_dimeric_14_1 SELEX + 56846334 56846347 1.0E-06 AACCAATATTTATT 14 FOXC1_forkhead_DBD_dimeric_14_1 SELEX - 56846334 56846347 1.0E-06 AATAAATATTGGTT 14 Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 56843360 56843377 5.0E-06 AGAATCAAAGTCCGATTA 18 TBX21_TBX_full_monomeric_10_1 SELEX - 56846399 56846408 4.0E-06 AATGTGTGAA 10 TBX2_TBX_full_monomeric_11_1 SELEX - 56846398 56846408 4.0E-06 AATGTGTGAAA 11 POU3F1_POU_DBD_monomeric_12_1 SELEX - 56846298 56846309 3.0E-06 ATATGGAAATAA 12 EN1_homeodomain_full_dimeric_14_1 SELEX + 56843436 56843449 4.0E-06 TAAATAGTTAGTTA 14 T_TBX_full_dimeric_16_1 SELEX - 56842752 56842767 6.0E-06 TAGCATCTAGTTGAGA 16 FOXC2_forkhead_DBD_dimeric_14_1 SELEX + 56846334 56846347 3.0E-06 AACCAATATTTATT 14 FOXC2_forkhead_DBD_dimeric_14_1 SELEX - 56846334 56846347 2.0E-06 AATAAATATTGGTT 14 Hoxd9_homeodomain_DBD_monomeric_9_1 SELEX - 56843302 56843310 9.0E-06 CACATAAAA 9 Hltf_MA0109.1 JASPAR - 56842680 56842689 4.0E-06 TTACTTATAT 10 SPDEF_ETS_full_putative-multimer_16_1 SELEX + 56843265 56843280 7.0E-06 GAAGAAGGAAGGAAAA 16 SOX21_HMG_DBD_dimeric_16_1 SELEX + 56846335 56846350 9.0E-06 ACCAATATTTATTGAG 16 POU2F1_POU_DBD_monomeric_12_1 SELEX - 56846299 56846310 8.0E-06 CATATGGAAATA 12 TBX20_TBX_DBD_monomeric_15_1 SELEX - 56846397 56846411 2.0E-06 AGAAATGTGTGAAAG 15 NRF1_NRF_full_dimeric_12_1 SELEX - 56842946 56842957 5.0E-06 CGCGCACGCGCA 12 POU3F2_POU_DBD_monomeric_12_1 SELEX - 56846298 56846309 4.0E-06 ATATGGAAATAA 12 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 56843360 56843377 7.0E-06 AGAATCAAAGTCCGATTA 18 Foxj3_forkhead_DBD_dimeric_13_1 SELEX + 56846326 56846338 8.0E-06 ATCAACATAACCA 13 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX + 56846303 56846312 9.0E-06 TCCATATGTT 10 BHLHA15_bHLH_DBD_dimeric_10_1 SELEX - 56846303 56846312 7.0E-06 AACATATGGA 10 TBX1_TBX_DBD_dimeric_20_1 SELEX + 56846243 56846262 8.0E-06 TATTGTGAATAATGCTGTTA 20 V_RUSH1A_02_M01107 TRANSFAC - 56842680 56842689 4.0E-06 TTACTTATAT 10 V_FOXP1_01_M00987 TRANSFAC - 56842670 56842689 3.0E-06 TTACTTATATCGTGGGTTTT 20 V_STAT5A_Q6_M01890 TRANSFAC + 56846404 56846416 5.0E-06 ACATTTCTCGTAA 13 V_DBX1_01_M01483 TRANSFAC - 56846287 56846303 0.0E+00 AAATAATTTAAAAATTT 17 V_DBX1_01_M01483 TRANSFAC - 56846288 56846304 3.0E-06 GAAATAATTTAAAAATT 17 V_CDX2_Q5_01_M01659 TRANSFAC - 56846339 56846349 2.0E-06 TCAATAAATAT 11 V_AR_02_M00953 TRANSFAC + 56842785 56842811 4.0E-06 CCCTCAGGCACTTTCTGTTCTAATTCA 27 V_E2F1_Q3_01_M00938 TRANSFAC + 56842995 56843010 2.0E-06 GTGGCGGGAAAAGGGA 16 V_RHOX11_01_M01347 TRANSFAC + 56846251 56846267 1.0E-06 ATAATGCTGTTATGAAA 17 V_BCL6_01_M01183 TRANSFAC - 56846285 56846300 1.0E-06 TAATTTAAAAATTTTT 16 V_BCL6_01_M01183 TRANSFAC + 56846288 56846303 9.0E-06 AATTTTTAAATTATTT 16 V_LMAF_Q2_M01139 TRANSFAC - 56842712 56842720 6.0E-06 GGTCAGCAG 9 V_HOXA13_02_M01297 TRANSFAC - 56843301 56843309 7.0E-06 ACATAAAAC 9 V_HOXA13_02_M01297 TRANSFAC - 56843460 56843468 1.0E-06 AAATAAAAC 9 V_EBOX_Q6_01_M01034 TRANSFAC + 56843229 56843238 4.0E-06 CCACGTGACT 10 V_AR_Q6_01_M01996 TRANSFAC + 56842792 56842806 1.0E-06 GCACTTTCTGTTCTA 15 V_SP1_Q6_01_M00931 TRANSFAC - 56842970 56842979 4.0E-06 GGGGCGGGGC 10 V_OCT1_Q5_01_M00930 TRANSFAC + 56846298 56846308 3.0E-06 TTATTTCCATA 11 V_EOMES_03_M02747 TRANSFAC - 56846395 56846411 4.0E-06 AGAAATGTGTGAAAGTT 17 V_TBR2_01_M01774 TRANSFAC - 56846399 56846407 8.0E-06 ATGTGTGAA 9 V_NFAT3_Q3_M01734 TRANSFAC - 56846650 56846659 4.0E-06 TATTTTTCCT 10 V_OCT1_01_M00135 TRANSFAC - 56846295 56846313 6.0E-06 AAACATATGGAAATAATTT 19 V_AP4_Q6_M00176 TRANSFAC + 56843172 56843181 5.0E-06 CTCAGCTGGA 10 V_SP1_03_M02281 TRANSFAC + 56842971 56842980 7.0E-06 CCCCGCCCCC 10 V_STAT6_01_M00494 TRANSFAC + 56846299 56846306 7.0E-06 TATTTCCA 8 V_LHX3_01_M01471 TRANSFAC - 56846289 56846305 7.0E-06 GGAAATAATTTAAAAAT 17 V_AIRE_02_M01000 TRANSFAC - 56846324 56846348 0.0E+00 CAATAAATATTGGTTATGTTGATGT 25 V_PU1_Q4_M01172 TRANSFAC - 56843265 56843283 7.0E-06 CCCTTTTCCTTCCTTCTTC 19 V_PU1_Q4_M01172 TRANSFAC - 56843276 56843294 6.0E-06 TGCACTCGCTTCCCTTTTC 19 V_HOXD13_01_M01404 TRANSFAC + 56842662 56842677 9.0E-06 CGTTCCATAAAACCCA 16 V_LYF1_01_M00141 TRANSFAC + 56843466 56843474 9.0E-06 TTTGGGAGG 9 V_NFAT2_01_M01748 TRANSFAC - 56846299 56846307 6.0E-06 ATGGAAATA 9 V_RHOX11_02_M01384 TRANSFAC + 56846251 56846267 1.0E-06 ATAATGCTGTTATGAAA 17 V_AR_03_M00956 TRANSFAC + 56842785 56842811 4.0E-06 CCCTCAGGCACTTTCTGTTCTAATTCA 27 V_GC_01_M00255 TRANSFAC - 56842968 56842981 4.0E-06 AGGGGGCGGGGCTC 14 V_HELIOSA_02_M01004 TRANSFAC + 56842582 56842592 1.0E-06 TCAAGGAAAAA 11 V_HELIOSA_02_M01004 TRANSFAC + 56846647 56846657 6.0E-06 AGAAGGAAAAA 11 V_LMX1_01_M01409 TRANSFAC - 56846289 56846305 4.0E-06 GGAAATAATTTAAAAAT 17 V_ARID5A_03_M02736 TRANSFAC + 56846336 56846349 4.0E-06 CCAATATTTATTGA 14 V_MRF2_01_M00454 TRANSFAC - 56846239 56846252 6.0E-06 ATTCACAATAGCCA 14 V_SP1_Q6_M00196 TRANSFAC - 56842969 56842981 0.0E+00 AGGGGGCGGGGCT 13 V_HNF3_Q6_M00791 TRANSFAC - 56846338 56846350 9.0E-06 CTCAATAAATATT 13 V_IRF_Q6_M00772 TRANSFAC + 56842791 56842805 6.0E-06 GGCACTTTCTGTTCT 15 V_HNF1_Q6_01_M01011 TRANSFAC - 56846349 56846369 9.0E-06 ATCTGATATAAAGTAAGCACT 21 V_TATA_C_M00216 TRANSFAC - 56846423 56846432 4.0E-06 ACTATAAAAT 10 V_NKX52_01_M01315 TRANSFAC - 56846341 56846357 4.0E-06 GTAAGCACTCAATAAAT 17 V_SFPI1_04_M02896 TRANSFAC + 56842804 56842817 6.0E-06 CTAATTCAGGAATT 14 V_ELF5_01_M01197 TRANSFAC - 56846299 56846309 1.0E-05 ATATGGAAATA 11 V_OCT1_04_M00138 TRANSFAC - 56846293 56846315 2.0E-06 CCAAACATATGGAAATAATTTAA 23 V_GR_Q6_M00192 TRANSFAC + 56842789 56842807 1.0E-06 CAGGCACTTTCTGTTCTAA 19 V_GR_Q6_M00192 TRANSFAC - 56846443 56846461 1.0E-05 AATAATCACTCTGTGCTTC 19 V_SPIB_01_M01204 TRANSFAC - 56843393 56843409 4.0E-06 AAGAAGGGGAAGAATGT 17 V_XFD2_01_M00268 TRANSFAC - 56846336 56846349 4.0E-06 TCAATAAATATTGG 14 V_CDC5_01_M00478 TRANSFAC - 56846426 56846437 6.0E-06 GTTTTACTATAA 12 V_NKX3A_01_M00451 TRANSFAC + 56842680 56842691 5.0E-06 ATATAAGTAAAG 12 V_NCX_02_M01420 TRANSFAC - 56846287 56846303 0.0E+00 AAATAATTTAAAAATTT 17 V_NCX_02_M01420 TRANSFAC - 56846288 56846304 3.0E-06 GAAATAATTTAAAAATT 17 V_STAT4_Q5_M02117 TRANSFAC - 56846407 56846416 1.0E-05 TTACGAGAAA 10 V_TBP_06_M02814 TRANSFAC - 56846286 56846301 4.0E-06 ATAATTTAAAAATTTT 16 V_TBP_06_M02814 TRANSFAC + 56846288 56846303 1.0E-05 AATTTTTAAATTATTT 16 V_TBP_06_M02814 TRANSFAC - 56846288 56846303 8.0E-06 AAATAATTTAAAAATT 16 V_OCT_Q6_M00795 TRANSFAC + 56846298 56846308 8.0E-06 TTATTTCCATA 11 V_HNF4A_02_M02868 TRANSFAC + 56843362 56843377 7.0E-06 AATCAAAGTCCGATTA 16 V_ICSBP_Q6_M00699 TRANSFAC - 56842793 56842804 5.0E-06 GAACAGAAAGTG 12 V_GR_Q6_02_M01836 TRANSFAC + 56842795 56842807 6.0E-06 CTTTCTGTTCTAA 13 V_GLI3_01_M01596 TRANSFAC - 56842724 56842734 9.0E-06 GTGTGTGGCCT 11 V_SP4_Q5_M01273 TRANSFAC + 56842970 56842980 1.0E-06 GCCCCGCCCCC 11 V_HBP1_04_M02866 TRANSFAC + 56846416 56846432 0.0E+00 ATGTCCCATTTTATAGT 17 V_TAL1_01_M01591 TRANSFAC - 56846643 56846655 6.0E-06 TTTCCTTCTCTGG 13 V_BARHL1_01_M01332 TRANSFAC - 56843432 56843447 6.0E-06 ACTAACTATTTAAGAC 16 V_NKX3A_02_M01383 TRANSFAC - 56846343 56846359 7.0E-06 AAGTAAGCACTCAATAA 17 V_CDP_01_M00095 TRANSFAC + 56846336 56846347 7.0E-06 CCAATATTTATT 12 V_RHOX11_05_M03099 TRANSFAC + 56846251 56846267 1.0E-06 ATAATGCTGTTATGAAA 17 V_ZFP206_01_M01742 TRANSFAC + 56842946 56842956 7.0E-06 TGCGCGTGCGC 11 V_ZFP206_01_M01742 TRANSFAC - 56842947 56842957 9.0E-06 CGCGCACGCGC 11 V_LMX1B_01_M01363 TRANSFAC + 56846288 56846304 9.0E-06 AATTTTTAAATTATTTC 17 V_FOX_Q2_M00809 TRANSFAC + 56846337 56846349 5.0E-06 CAATATTTATTGA 13 V_PLZF_02_M01075 TRANSFAC + 56845941 56845969 8.0E-06 CTCTATACCCATTAAACAACTGCCTATTC 29 V_PLZF_02_M01075 TRANSFAC + 56846282 56846310 4.0E-06 TTGAAAAATTTTTAAATTATTTCCATATG 29 V_EWSR1FLI1_01_M02252 TRANSFAC + 56843263 56843280 2.0E-06 GTGAAGAAGGAAGGAAAA 18 V_FOXJ2_01_M00422 TRANSFAC - 56846335 56846352 2.0E-06 CACTCAATAAATATTGGT 18 V_SOX18_04_M02905 TRANSFAC + 56843378 56843393 5.0E-06 GAGGTGAATTTACAAA 16 V_HOXD8_01_M01432 TRANSFAC - 56846333 56846349 4.0E-06 TCAATAAATATTGGTTA 17 V_SOX1_03_M02802 TRANSFAC - 56846288 56846303 8.0E-06 AAATAATTTAAAAATT 16 V_PR_02_M00957 TRANSFAC + 56842785 56842811 2.0E-06 CCCTCAGGCACTTTCTGTTCTAATTCA 27 V_SP1_Q2_01_M00933 TRANSFAC + 56842971 56842980 4.0E-06 CCCCGCCCCC 10 V_HMX3_02_M01413 TRANSFAC - 56846341 56846357 8.0E-06 GTAAGCACTCAATAAAT 17 V_SP1_Q4_01_M00932 TRANSFAC - 56842969 56842981 0.0E+00 AGGGGGCGGGGCT 13 V_GFI1_Q6_01_M02010 TRANSFAC - 56843322 56843331 2.0E-06 CTGTGATTTT 10 V_RHOX11_06_M03100 TRANSFAC + 56846251 56846267 1.0E-06 ATAATGCTGTTATGAAA 17 V_CDPCR3_01_M00105 TRANSFAC + 56846334 56846348 1.0E-06 AACCAATATTTATTG 15

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