Search TFs
or Genes
Construction
and Validation
Optimal
Promoter Size
Download Citation and
Contact

TRIM4


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
89122 tripartite motif containing 4 chr7 -99516723 - 99522223 99517223

Transcription Factor Binding Sites

 
Download all TFBS in the TRIM4 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
NFAT5_NFAT_DBD_dimeric_14_1 SELEX + 99517340 99517353 1.0E-06 GTGGAAAGCTACAG 14
Tcf7_HMG_DBD_monomeric_12_1 SELEX - 99517417 99517428 5.0E-06 AAAGATCATAGG 12
Zfx_MA0146.1 JASPAR - 99517267 99517280 0.0E+00 CGCGCCTAGGCCTG 14
V_ELK1_04_M01165 TRANSFAC + 99517219 99517229 6.0E-06 GACCGGAAGCT 11
V_GATA3_03_M00351 TRANSFAC - 99517419 99517428 1.0E-06 AAAGATCATA 10
V_STAT6_01_M00494 TRANSFAC - 99516966 99516973 7.0E-06 TATTTCCA 8
V_RPC155_01_M01798 TRANSFAC + 99517163 99517178 5.0E-06 TCCGGGGTTCAGGACC 16
V_IRF_Q6_M00772 TRANSFAC + 99517151 99517165 3.0E-06 CGCAGTTTCTCTTCC 15
V_ISRE_01_M00258 TRANSFAC + 99517153 99517167 0.0E+00 CAGTTTCTCTTCCGG 15
V_ICSBP_Q6_M00699 TRANSFAC - 99517153 99517164 1.0E-06 GAAGAGAAACTG 12
V_E2_Q6_01_M00928 TRANSFAC - 99517901 99517916 9.0E-06 TGAACCTCTTTTGGTT 16
V_VDR_Q6_M00961 TRANSFAC - 99517910 99517921 4.0E-06 CTCTCTGAACCT 12
V_TBP_04_M02918 TRANSFAC + 99517475 99517489 3.0E-06 CCGATTTAAGTTTTA 15
V_PLZF_02_M01075 TRANSFAC - 99517473 99517501 7.0E-06 CTCCTGGGACTCTAAAACTTAAATCGGTC 29
V_T3RBETA_Q6_01_M02119 TRANSFAC - 99517008 99517024 4.0E-06 ATGGAAGCTGAGGACAT 17
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
A Django site.   Powered by PostgreSQL