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RRP36 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 88745 ribosomal RNA processing 36 homolog (S. cerevisiae) chr6 + 42984384 - 42989884 42989384 Transcription Factor Binding Sites   Download all TFBS in the RRP36 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints ZNF713_C2H2_full_monomeric_17_1 SELEX + 42989144 42989160 1.0E-06 AAACCAAATGCCACCAA 17 SOX21_HMG_DBD_dimeric_13_2 SELEX - 42985896 42985908 8.0E-06 TGAATGTCATTGG 13 MEF2D_MADS_DBD_dimeric_12_1 SELEX + 42984431 42984442 1.0E-06 GCTATTAATAGC 12 MEF2D_MADS_DBD_dimeric_12_1 SELEX - 42984431 42984442 1.0E-06 GCTATTAATAGC 12 ELF4_ETS_full_monomeric_12_1 SELEX - 42989684 42989695 1.0E-05 ATCCCGGAAGCA 12 ZNF75A_C2H2_DBD_monomeric_12_1 SELEX - 42987231 42987242 4.0E-06 TCATTTCCCACA 12 SRY_HMG_DBD_dimeric_16_1 SELEX + 42987921 42987936 6.0E-06 AAAAATTAATATGGTT 16 SRY_HMG_DBD_dimeric_16_1 SELEX - 42987921 42987936 4.0E-06 AACCATATTAATTTTT 16 EBF1_MA0154.1 JASPAR - 42984702 42984711 5.0E-06 CCCCAAGGGA 10 GATA5_GATA_DBD_monomeric_8_1 SELEX - 42985939 42985946 7.0E-06 AGATAAGA 8 MEF2A_MADS_DBD_dimeric_12_1 SELEX + 42984431 42984442 1.0E-06 GCTATTAATAGC 12 MEF2A_MADS_DBD_dimeric_12_1 SELEX - 42984431 42984442 1.0E-06 GCTATTAATAGC 12 GATA4_GATA_DBD_monomeric_8_1 SELEX - 42985939 42985946 7.0E-06 AGATAAGA 8 MEF2B_MADS_full_dimeric_12_1 SELEX + 42984431 42984442 0.0E+00 GCTATTAATAGC 12 MEF2B_MADS_full_dimeric_12_1 SELEX - 42984431 42984442 0.0E+00 GCTATTAATAGC 12 MEF2A_MA0052.1 JASPAR + 42984432 42984441 2.0E-06 CTATTAATAG 10 MEF2A_MA0052.1 JASPAR - 42984432 42984441 2.0E-06 CTATTAATAG 10 SP1_MA0079.2 JASPAR + 42988822 42988831 3.0E-06 CCCCTCCCCC 10 SOX7_HMG_full_dimeric_16_1 SELEX + 42987921 42987936 9.0E-06 AAAAATTAATATGGTT 16 Gata1_MA0035.2 JASPAR - 42985938 42985948 1.0E-06 ACAGATAAGAG 11 GATA3_GATA_full_monomeric_8_1 SELEX - 42985939 42985946 7.0E-06 AGATAAGA 8 MZF1_5-13_MA0057.1 JASPAR - 42988819 42988828 4.0E-06 GGAGGGGGAA 10 NRL_bZIP_DBD_monomeric_11_1 SELEX + 42986041 42986051 8.0E-06 TTTGTGCTGAC 11 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX + 42984463 42984473 9.0E-06 TTTCCCCACCT 11 FOXO3_forkhead_full_putatively-multimeric_11_1 SELEX - 42987941 42987951 8.0E-06 CTTCCCCACCC 11 SRY_HMG_DBD_dimeric_13_1 SELEX + 42985896 42985908 3.0E-06 CCAATGACATTCA 13 ONECUT3_CUT_DBD_monomeric_14_1 SELEX + 42987920 42987933 1.0E-05 AAAAAATTAATATG 14 V_FOXP1_01_M00987 TRANSFAC - 42987910 42987929 2.0E-06 TTAATTTTTTTTTTGAGTCT 20 V_DBX1_01_M01483 TRANSFAC + 42987919 42987935 9.0E-06 AAAAAAATTAATATGGT 17 V_TCF3_01_M01594 TRANSFAC + 42985961 42985973 1.0E-06 TCTTTCTTTTTTT 13 V_GATA1_Q6_M02004 TRANSFAC - 42985937 42985951 7.0E-06 TGTACAGATAAGAGT 15 V_GATA2_02_M00348 TRANSFAC - 42985939 42985948 2.0E-06 ACAGATAAGA 10 V_ZFX_01_M01593 TRANSFAC + 42984882 42984897 9.0E-06 CAGCAGGCCGTGCCGG 16 V_PAX4_03_M00378 TRANSFAC + 42985979 42985990 1.0E-06 AATCCCCACCCT 12 V_HMGIY_Q3_M01010 TRANSFAC - 42987917 42987931 2.0E-06 TATTAATTTTTTTTT 15 V_HMGIY_Q3_M01010 TRANSFAC - 42987918 42987932 2.0E-06 ATATTAATTTTTTTT 15 V_FOXD3_01_M00130 TRANSFAC - 42987916 42987927 9.0E-06 AATTTTTTTTTT 12 V_BCL6_01_M01183 TRANSFAC - 42987916 42987931 1.0E-06 TATTAATTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC - 42987917 42987932 5.0E-06 ATATTAATTTTTTTTT 16 V_PROP1_01_M01294 TRANSFAC - 42987918 42987928 5.0E-06 TAATTTTTTTT 11 V_FOXJ2_02_M00423 TRANSFAC + 42984432 42984445 9.0E-06 CTATTAATAGCTGT 14 V_MEF2_02_M00231 TRANSFAC + 42984425 42984446 1.0E-06 GGCTGGGCTATTAATAGCTGTG 22 V_MEF2_02_M00231 TRANSFAC - 42984427 42984448 1.0E-06 CTCACAGCTATTAATAGCCCAG 22 V_EGR_Q6_M00807 TRANSFAC + 42989081 42989091 1.0E-05 GTGGGGGCAGG 11 V_ISL2_01_M01328 TRANSFAC + 42987917 42987932 4.0E-06 AAAAAAAAATTAATAT 16 V_IRF_Q6_01_M00972 TRANSFAC - 42985962 42985972 5.0E-06 AAAAAAGAAAG 11 V_ZFP740_03_M02834 TRANSFAC - 42989663 42989678 1.0E-06 TCTCACCCCCCACTTT 16 V_IRF2_Q6_M01882 TRANSFAC - 42985959 42985974 6.0E-06 AAAAAAAAGAAAGAGC 16 V_GTF2IRD1_01_M01229 TRANSFAC + 42989691 42989699 7.0E-06 GGGATTAGG 9 V_SP1_03_M02281 TRANSFAC + 42988822 42988831 3.0E-06 CCCCTCCCCC 10 V_AP4_Q6_02_M01860 TRANSFAC + 42988892 42988904 1.0E-05 GCAGCTGTTGGCA 13 V_LYF1_01_M00141 TRANSFAC - 42985972 42985980 9.0E-06 TTTGGGAAA 9 V_AP4_Q6_01_M00927 TRANSFAC - 42988892 42988900 1.0E-05 AACAGCTGC 9 V_TCFAP2E_04_M02926 TRANSFAC - 42985967 42985980 4.0E-06 TTTGGGAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 42987911 42987924 0.0E+00 GACTCAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC + 42987913 42987926 8.0E-06 CTCAAAAAAAAAAT 14 V_CDX_Q5_M00991 TRANSFAC + 42987916 42987933 1.0E-06 AAAAAAAAAATTAATATG 18 V_NKX62_Q2_M00489 TRANSFAC - 42987921 42987932 9.0E-06 ATATTAATTTTT 12 V_ELF4_04_M02850 TRANSFAC + 42987911 42987927 5.0E-06 GACTCAAAAAAAAAATT 17 V_ELF4_04_M02850 TRANSFAC + 42987912 42987928 0.0E+00 ACTCAAAAAAAAAATTA 17 V_ELF4_04_M02850 TRANSFAC + 42987913 42987929 4.0E-06 CTCAAAAAAAAAATTAA 17 V_COMP1_01_M00057 TRANSFAC - 42984461 42984484 8.0E-06 TGTGTTCTTTGAGGTGGGGAAAGG 24 V_GC_01_M00255 TRANSFAC - 42989916 42989929 9.0E-06 GGGAGGCGGAGCTT 14 V_MTERF_01_M01245 TRANSFAC - 42989146 42989159 8.0E-06 TGGTGGCATTTGGT 14 V_ZFP105_03_M02827 TRANSFAC + 42987913 42987927 4.0E-06 CTCAAAAAAAAAATT 15 V_ZFP105_03_M02827 TRANSFAC + 42987914 42987928 4.0E-06 TCAAAAAAAAAATTA 15 V_ZFP105_03_M02827 TRANSFAC + 42987915 42987929 3.0E-06 CAAAAAAAAAATTAA 15 V_NFAT_Q6_M00302 TRANSFAC - 42985890 42985901 1.0E-06 CATTGGAAAAAC 12 V_NKX61_01_M00424 TRANSFAC - 42987920 42987932 6.0E-06 ATATTAATTTTTT 13 V_RSRFC4_Q2_M00407 TRANSFAC - 42984428 42984444 0.0E+00 CAGCTATTAATAGCCCA 17 V_RSRFC4_Q2_M00407 TRANSFAC + 42984429 42984445 1.0E-06 GGGCTATTAATAGCTGT 17 V_EVI1_01_M00078 TRANSFAC + 42984517 42984532 5.0E-06 AGACAAGAGAATATAC 16 V_IRF_Q6_M00772 TRANSFAC + 42985958 42985972 3.0E-06 TGCTCTTTCTTTTTT 15 V_STAT5A_02_M00460 TRANSFAC - 42984472 42984495 6.0E-06 CTCTAAGAATCTGTGTTCTTTGAG 24 V_HNF1_Q6_01_M01011 TRANSFAC + 42987914 42987934 5.0E-06 TCAAAAAAAAAATTAATATGG 21 V_MEF2_03_M00232 TRANSFAC + 42984425 42984446 5.0E-06 GGCTGGGCTATTAATAGCTGTG 22 V_MEF2_03_M00232 TRANSFAC - 42984427 42984448 5.0E-06 CTCACAGCTATTAATAGCCCAG 22 V_IK2_01_M00087 TRANSFAC - 42985970 42985981 1.0E-06 ATTTGGGAAAAA 12 V_GATA1_09_M02254 TRANSFAC - 42985938 42985948 1.0E-06 ACAGATAAGAG 11 V_RREB1_01_M00257 TRANSFAC - 42987935 42987948 1.0E-05 CCCCACCCACCCAA 14 V_EBF1_01_M02267 TRANSFAC - 42984702 42984711 5.0E-06 CCCCAAGGGA 10 V_NCX_02_M01420 TRANSFAC + 42987919 42987935 5.0E-06 AAAAAAATTAATATGGT 17 V_PMX2B_01_M01356 TRANSFAC + 42987917 42987933 9.0E-06 AAAAAAAAATTAATATG 17 V_SP3_Q3_M00665 TRANSFAC - 42988842 42988855 9.0E-06 AGCAGAGGGGAGGG 14 V_SP1_01_M00008 TRANSFAC + 42989084 42989093 7.0E-06 GGGGCAGGGT 10 V_LHX3b_01_M01971 TRANSFAC - 42987922 42987931 7.0E-06 TATTAATTTT 10 V_MZF1_02_M00084 TRANSFAC - 42988819 42988831 1.0E-06 GGGGGAGGGGGAA 13 V_SOX15_03_M02799 TRANSFAC + 42987916 42987932 1.0E-05 AAAAAAAAAATTAATAT 17 V_GATA1_05_M00346 TRANSFAC - 42985939 42985948 1.0E-05 ACAGATAAGA 10 V_FAC1_01_M00456 TRANSFAC + 42987912 42987925 9.0E-06 ACTCAAAAAAAAAA 14 V_IPF1_05_M01255 TRANSFAC + 42987921 42987932 2.0E-06 AAAAATTAATAT 12 V_GATA1_04_M00128 TRANSFAC - 42985937 42985949 3.0E-06 TACAGATAAGAGT 13 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC - 42985983 42985991 8.0E-06 GAGGGTGGG 9 V_BARHL1_01_M01332 TRANSFAC + 42987917 42987932 7.0E-06 AAAAAAAAATTAATAT 16 V_ZBTB3_03_M02825 TRANSFAC - 42989650 42989666 7.0E-06 CTTTCCACTGCACTGGG 17 V_SIRT6_01_M01797 TRANSFAC - 42985939 42985946 7.0E-06 AGATAAGA 8 V_GATA3_02_M00350 TRANSFAC - 42985939 42985948 8.0E-06 ACAGATAAGA 10 V_ASCL2_04_M02841 TRANSFAC + 42988837 42988852 6.0E-06 CTATCCCCTCCCCTCT 16 V_RSRFC4_01_M00026 TRANSFAC + 42984429 42984444 0.0E+00 GGGCTATTAATAGCTG 16 V_RSRFC4_01_M00026 TRANSFAC - 42984429 42984444 1.0E-06 CAGCTATTAATAGCCC 16 V_ZFP281_01_M01597 TRANSFAC - 42988822 42988832 3.0E-06 AGGGGGAGGGG 11 V_IRF1_Q6_01_M01881 TRANSFAC + 42985960 42985973 5.0E-06 CTCTTTCTTTTTTT 14 V_SOX8_03_M02808 TRANSFAC - 42987916 42987932 7.0E-06 ATATTAATTTTTTTTTT 17 V_GATA2_03_M00349 TRANSFAC - 42985939 42985948 1.0E-06 ACAGATAAGA 10 V_SRF_06_M02916 TRANSFAC - 42985963 42985979 8.0E-06 TTGGGAAAAAAAAGAAA 17 V_SRF_06_M02916 TRANSFAC - 42985964 42985980 6.0E-06 TTTGGGAAAAAAAAGAA 17 V_SRF_06_M02916 TRANSFAC + 42987911 42987927 8.0E-06 GACTCAAAAAAAAAATT 17 V_SRF_06_M02916 TRANSFAC + 42987912 42987928 0.0E+00 ACTCAAAAAAAAAATTA 17 V_SRF_06_M02916 TRANSFAC + 42987913 42987929 1.0E-06 CTCAAAAAAAAAATTAA 17 V_SRF_06_M02916 TRANSFAC + 42987915 42987931 8.0E-06 CAAAAAAAAAATTAATA 17 V_HOXD8_01_M01432 TRANSFAC + 42984428 42984444 7.0E-06 TGGGCTATTAATAGCTG 17 V_SOX15_04_M02903 TRANSFAC - 42985895 42985909 1.0E-06 GTGAATGTCATTGGA 15 V_MEF2A_05_M01301 TRANSFAC + 42984430 42984441 4.0E-06 GGCTATTAATAG 12 V_MEF2A_05_M01301 TRANSFAC - 42984432 42984443 3.0E-06 AGCTATTAATAG 12 V_GATA5_03_M02756 TRANSFAC - 42985935 42985951 9.0E-06 TGTACAGATAAGAGTCC 17 V_UF1H3BETA_Q6_M01068 TRANSFAC - 42984459 42984472 8.0E-06 GGTGGGGAAAGGGA 14 V_UF1H3BETA_Q6_M01068 TRANSFAC + 42989328 42989341 2.0E-06 GGCGGGGCAGGGGC 14 V_GATA1_02_M00126 TRANSFAC - 42985937 42985950 1.0E-06 GTACAGATAAGAGT 14 V_GATA6_04_M02757 TRANSFAC - 42985935 42985951 4.0E-06 TGTACAGATAAGAGTCC 17 V_TCF3_05_M02920 TRANSFAC + 42987912 42987926 0.0E+00 ACTCAAAAAAAAAAT 15 V_STAT1_05_M01260 TRANSFAC + 42987227 42987248 6.0E-06 TACTTGTGGGAAATGAGATGGA 22 V_SMAD1_01_M01590 TRANSFAC - 42985960 42985971 1.0E-05 AAAAAGAAAGAG 12 V_NANOG_02_M01247 TRANSFAC - 42985956 42985975 6.0E-06 GAAAAAAAAGAAAGAGCAGA 20 V_GATA1_06_M00347 TRANSFAC - 42985939 42985948 2.0E-06 ACAGATAAGA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.