Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TNFRSF10C Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8794 tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain chr8 + 22955326 - 22960826 22960326 Transcription Factor Binding Sites   Download all TFBS in the TNFRSF10C promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints SOX21_HMG_DBD_dimeric_15_1 SELEX + 22961884 22961898 1.0E-06 AACAAGGGTATTGTA 15 MESP1_bHLH_DBD_dimeric_10_1 SELEX + 22963627 22963636 1.0E-06 AACACCTGTG 10 SPIC_ETS_full_monomeric_14_1 SELEX - 22963388 22963401 7.0E-06 TAAAACAGGAAAAA 14 SRY_HMG_DBD_dimeric_15_1 SELEX - 22961884 22961898 0.0E+00 TACAATACCCTTGTT 15 SOX2_HMG_full_dimeric_17_1 SELEX - 22961883 22961899 1.0E-06 ATACAATACCCTTGTTT 17 SRY_HMG_DBD_dimeric_13_2 SELEX - 22963410 22963422 3.0E-06 TGAATCTCATTTT 13 NR2F1_nuclearreceptor_DBD_monomeric_13_1 SELEX + 22964512 22964524 1.0E-06 AAGAGGTCAAAGG 13 ELF4_ETS_full_monomeric_12_1 SELEX + 22963592 22963603 6.0E-06 ATCCAGGAAGTA 12 CUX1_CUT_DBD_dimeric_17_1 SELEX + 22960478 22960494 7.0E-06 AACGATTTCTGATAGAT 17 CUX1_CUT_DBD_dimeric_17_1 SELEX - 22960478 22960494 6.0E-06 ATCTATCAGAAATCGTT 17 Sox17_HMG_DBD_dimeric_15_1 SELEX - 22961884 22961898 4.0E-06 TACAATACCCTTGTT 15 KLF13_C2H2_full_monomeric_18_1 SELEX + 22960328 22960345 4.0E-06 AGGCCATGCCCCTTTTCT 18 SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 22964533 22964545 7.0E-06 AAACAACAGGTGC 13 TCF7L1_HMG_full_monomeric_12_1 SELEX + 22964513 22964524 2.0E-06 AGAGGTCAAAGG 12 GBX2_homeodomain_full_monomeric_10_1 SELEX + 22964346 22964355 1.0E-05 AACAATTAGC 10 ELF3_ETS_full_monomeric_13_1 SELEX + 22963592 22963604 3.0E-06 ATCCAGGAAGTAA 13 SOX14_HMG_DBD_dimeric_13_1 SELEX - 22961885 22961897 7.0E-06 ACAATACCCTTGT 13 SOX14_HMG_DBD_dimeric_13_1 SELEX + 22964547 22964559 9.0E-06 TCAATAGCCTTTA 13 SOX15_HMG_full_dimeric_15_1 SELEX - 22961884 22961898 2.0E-06 TACAATACCCTTGTT 15 SOX7_HMG_full_dimeric_17_1 SELEX + 22961883 22961899 1.0E-06 AAACAAGGGTATTGTAT 17 SOX7_HMG_full_dimeric_17_1 SELEX - 22961883 22961899 9.0E-06 ATACAATACCCTTGTTT 17 SCRT1_C2H2_DBD_monomeric_15_1 SELEX - 22964531 22964545 7.0E-06 AAACAACAGGTGCAA 15 SOX14_HMG_DBD_dimeric_12_1 SELEX - 22961886 22961897 9.0E-06 ACAATACCCTTG 12 PRDM1_C2H2_full_monomeric-or-dimeric_15_1 SELEX - 22961135 22961149 9.0E-06 AGGAGGTGAAAGTTG 15 ID4_bHLH_DBD_dimeric_10_1 SELEX + 22964532 22964541 8.0E-06 TGCACCTGTT 10 EHF_ETS_full_monomeric_12_1 SELEX + 22963592 22963603 6.0E-06 ATCCAGGAAGTA 12 Myf_MA0055.1 JASPAR - 22964534 22964545 5.0E-06 AAACAACAGGTG 12 HOXA13_homeodomain_full_monomeric_11_1 SELEX - 22963396 22963406 3.0E-06 ACTTGTAAAAC 11 ELF5_ETS_full_monomeric_11_1 SELEX + 22963593 22963603 9.0E-06 TCCAGGAAGTA 11 ELF3_ETS_DBD_monomeric_12_1 SELEX + 22963592 22963603 4.0E-06 ATCCAGGAAGTA 12 Sox3_HMG_DBD_dimeric_17_1 SELEX + 22961883 22961899 0.0E+00 AAACAAGGGTATTGTAT 17 Sox3_HMG_DBD_dimeric_17_1 SELEX - 22961883 22961899 1.0E-06 ATACAATACCCTTGTTT 17 MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 22964336 22964353 5.0E-06 GAAAATACAAAACAATTA 18 Sox1_HMG_DBD_dimeric_15_1 SELEX - 22961884 22961898 4.0E-06 TACAATACCCTTGTT 15 RREB1_MA0073.1 JASPAR + 22960285 22960304 8.0E-06 GCACCCACCACCAAAACCCA 20 TCF3_bHLH_DBD_dimeric_10_1 SELEX + 22963627 22963636 4.0E-06 AACACCTGTG 10 SOX9_HMG_full_dimeric_17_1 SELEX + 22961883 22961899 4.0E-06 AAACAAGGGTATTGTAT 17 FOXJ2_forkhead_DBD_dimeric_14_1 SELEX + 22964336 22964349 1.0E-05 GAAAATACAAAACA 14 V_ELF5_02_M01980 TRANSFAC + 22963594 22963603 5.0E-06 CCAGGAAGTA 10 V_ELF5_03_M02057 TRANSFAC + 22963594 22963603 8.0E-06 CCAGGAAGTA 10 V_FOXP3_Q4_M00992 TRANSFAC - 22961102 22961118 4.0E-06 AAAGTTTTTTCACTGGC 17 V_NRSF_Q4_M01028 TRANSFAC - 22960161 22960179 5.0E-06 GCGCTGCCCACTGCGCTGC 19 V_ZEC_01_M01081 TRANSFAC + 22963376 22963388 1.0E-06 GAAGGTAGGTTGT 13 V_BCL6_01_M01183 TRANSFAC + 22960483 22960498 6.0E-06 TTTCTGATAGATTTTT 16 V_ETS_B_M00340 TRANSFAC + 22961181 22961194 7.0E-06 GGCAGGAAGCGGTT 14 V_ESE1_01_M01977 TRANSFAC + 22963594 22963603 8.0E-06 CCAGGAAGTA 10 V_FOXJ1_04_M02854 TRANSFAC - 22961302 22961316 4.0E-06 AACTCACAACAACTT 15 V_CEBP_C_M00201 TRANSFAC + 22960359 22960376 4.0E-06 TGACTGCTGCAAGTGACA 18 V_CEBP_C_M00201 TRANSFAC - 22963348 22963365 1.0E-05 GTTGTTAGGAAATCCACT 18 V_NFAT3_Q3_M01734 TRANSFAC + 22963386 22963395 6.0E-06 TGTTTTTCCT 10 V_NKX25_Q6_M02108 TRANSFAC - 22960365 22960375 4.0E-06 GTCACTTGCAG 11 V_POU1F1_Q6_M00744 TRANSFAC - 22964556 22964565 7.0E-06 ATGAATTAAA 10 V_SOX11_04_M02899 TRANSFAC - 22964341 22964354 2.0E-06 CTAATTGTTTTGTA 14 V_EAR2_Q2_M01728 TRANSFAC + 22963453 22963466 2.0E-06 TGATCTCTGTCCTG 14 V_NERF_Q2_M00531 TRANSFAC + 22961180 22961197 4.0E-06 TGGCAGGAAGCGGTTAAC 18 V_PU1_Q4_M01172 TRANSFAC + 22962074 22962092 2.0E-06 GAATTCTACTTCTCCTTCT 19 V_PU1_Q4_M01172 TRANSFAC + 22963382 22963400 8.0E-06 AGGTTGTTTTTCCTGTTTT 19 V_LYF1_01_M00141 TRANSFAC + 22963654 22963662 9.0E-06 TTTGGGAGG 9 V_AP4_Q6_01_M00927 TRANSFAC - 22961948 22961956 6.0E-06 ACCAGCTGC 9 V_TCFAP2E_04_M02926 TRANSFAC - 22963385 22963398 8.0E-06 AACAGGAAAAACAA 14 V_STAT4_Q4_M01666 TRANSFAC - 22961871 22961884 4.0E-06 TTAAAAGAAGATCA 14 V_RPC155_01_M01798 TRANSFAC + 22964644 22964659 0.0E+00 CCAGGAGTTCAAGACC 16 V_ETS_Q4_M00771 TRANSFAC - 22961183 22961194 1.0E-06 AACCGCTTCCTG 12 V_TST1_01_M00133 TRANSFAC - 22961919 22961933 1.0E-06 AGTGAATTAAAATGT 15 V_SOX7_03_M02807 TRANSFAC + 22964339 22964360 6.0E-06 AATACAAAACAATTAGCGGAGT 22 V_MYF_01_M01302 TRANSFAC - 22964534 22964545 5.0E-06 AAACAACAGGTG 12 V_HNF1_Q6_M00790 TRANSFAC + 22961211 22961228 1.0E-05 TGGTTAATGTCTTCCACT 18 V_NFAT_Q6_M00302 TRANSFAC - 22963387 22963398 7.0E-06 AACAGGAAAAAC 12 V_PXRRXR_02_M01153 TRANSFAC + 22963502 22963509 1.0E-05 AGAGTTCA 8 V_HNF3A_01_M01261 TRANSFAC + 22963599 22963608 2.0E-06 AAGTAAACAG 10 V_E47_02_M00071 TRANSFAC - 22963624 22963639 1.0E-06 AGGCACAGGTGTTCTC 16 V_E47_02_M00071 TRANSFAC - 22964529 22964544 6.0E-06 AACAACAGGTGCAAGA 16 V_LEF1_03_M02878 TRANSFAC - 22963582 22963597 7.0E-06 CTGGATGAATCACTTT 16 V_SOX18_03_M02801 TRANSFAC + 22961991 22962006 1.0E-05 CAGCATTGTACTAAAT 16 V_SOX18_03_M02801 TRANSFAC - 22964340 22964355 8.0E-06 GCTAATTGTTTTGTAT 16 V_EHF_02_M01974 TRANSFAC + 22963594 22963603 3.0E-06 CCAGGAAGTA 10 V_GR_Q6_M00192 TRANSFAC - 22961352 22961370 6.0E-06 TATACATAATATGTCCTTG 19 V_TEL2_Q6_M00678 TRANSFAC - 22963595 22963604 1.0E-06 TTACTTCCTG 10 V_HFH1_01_M00129 TRANSFAC - 22963599 22963610 8.0E-06 CACTGTTTACTT 12 V_NCX_02_M01420 TRANSFAC - 22964551 22964567 6.0E-06 TTATGAATTAAAGGCTA 17 V_ARID3A_04_M02735 TRANSFAC + 22964553 22964569 9.0E-06 GCCTTTAATTCATAATA 17 V_NR1B1_Q6_M02110 TRANSFAC + 22964513 22964522 4.0E-06 AGAGGTCAAA 10 V_FOXO1_Q5_M01216 TRANSFAC - 22963384 22963392 5.0E-06 AAAAACAAC 9 V_FOXO1_Q5_M01216 TRANSFAC - 22964539 22964547 5.0E-06 AAAAACAAC 9 V_ELF1_Q6_M00746 TRANSFAC - 22963389 22963400 2.0E-06 AAAACAGGAAAA 12 V_EHF_03_M02052 TRANSFAC + 22963594 22963603 5.0E-06 CCAGGAAGTA 10 V_TBP_01_M00471 TRANSFAC + 22960403 22960410 8.0E-06 TATAAATT 8 V_FAC1_01_M00456 TRANSFAC + 22964340 22964353 8.0E-06 ATACAAAACAATTA 14 V_TCFE2A_03_M02823 TRANSFAC - 22964528 22964544 0.0E+00 AACAACAGGTGCAAGAA 17 V_HNF1_01_M00132 TRANSFAC + 22961212 22961226 5.0E-06 GGTTAATGTCTTCCA 15 V_FOXL1_02_M02857 TRANSFAC + 22964339 22964354 6.0E-06 AATACAAAACAATTAG 16 V_FOXJ3_06_M02855 TRANSFAC + 22964338 22964354 5.0E-06 AAATACAAAACAATTAG 17 V_T3R_Q6_M00963 TRANSFAC + 22963524 22963532 7.0E-06 CCTGTCCTT 9 V_ESRRA_04_M02852 TRANSFAC + 22964509 22964525 6.0E-06 CAAAAGAGGTCAAAGGA 17 V_TCF1_06_M02815 TRANSFAC + 22961187 22961203 7.0E-06 AAGCGGTTAACCAAGGT 17 V_TCF7L2_04_M02922 TRANSFAC - 22963582 22963597 5.0E-06 CTGGATGAATCACTTT 16 V_STAT1STAT1_Q3_M01212 TRANSFAC - 22961874 22961886 6.0E-06 GTTTAAAAGAAGA 13 V_STAT6_02_M00500 TRANSFAC + 22963352 22963359 1.0E-05 GATTTCCT 8 V_ZABC1_01_M01306 TRANSFAC + 22961984 22961991 1.0E-05 ATTCCAAC 8 V_ESE1_02_M02055 TRANSFAC + 22963594 22963603 3.0E-06 CCAGGAAGTA 10 V_T3RBETA_Q6_01_M02119 TRANSFAC - 22961140 22961156 8.0E-06 AGGACAGAGGAGGTGAA 17 V_ETS1_B_M00339 TRANSFAC + 22961182 22961196 7.0E-06 GCAGGAAGCGGTTAA 15 V_OCT1_07_M00248 TRANSFAC + 22961918 22961929 9.0E-06 CACATTTTAATT 12 V_GATA2_03_M00349 TRANSFAC - 22963451 22963460 9.0E-06 AGAGATCAGA 10 V_FOXO1_04_M01969 TRANSFAC - 22961299 22961318 7.0E-06 CCAACTCACAACAACTTTAC 20 V_HOXD8_01_M01432 TRANSFAC - 22964551 22964567 9.0E-06 TTATGAATTAAAGGCTA 17 V_SOX1_03_M02802 TRANSFAC + 22964555 22964570 4.0E-06 CTTTAATTCATAATAG 16 V_BSX_01_M01442 TRANSFAC + 22964344 22964359 5.0E-06 AAAACAATTAGCGGAG 16 V_BARHL2_01_M01446 TRANSFAC + 22964342 22964357 3.0E-06 ACAAAACAATTAGCGG 16 V_SOX12_03_M02796 TRANSFAC - 22964340 22964353 1.0E-06 TAATTGTTTTGTAT 14 V_SRY_05_M02917 TRANSFAC + 22964340 22964356 1.0E-06 ATACAAAACAATTAGCG 17 V_ARP1_01_M00155 TRANSFAC - 22964639 22964654 4.0E-06 TGAACTCCTGGGCTCA 16 V_FOXO4_01_M00472 TRANSFAC - 22963382 22963392 6.0E-06 AAAAACAACCT 11 V_EHF_07_M02849 TRANSFAC + 22963349 22963364 4.0E-06 GTGGATTTCCTAACAA 16 V_LTF_Q6_M01692 TRANSFAC - 22960367 22960375 1.0E-05 GTCACTTGC 9 V_DEC_Q1_M00997 TRANSFAC + 22963672 22963684 6.0E-06 CCCCATGTGAATC 13 V_ARID5A_04_M02840 TRANSFAC + 22964334 22964350 8.0E-06 CTGAAAATACAAAACAA 17 V_SMAD1_01_M01590 TRANSFAC + 22964504 22964515 2.0E-06 AAACACAAAAGA 12 V_NANOG_02_M01247 TRANSFAC + 22964500 22964519 5.0E-06 TAGGAAACACAAAAGAGGTC 20 V_ESE1_Q3_M01214 TRANSFAC + 22963594 22963603 3.0E-06 CCAGGAAGTA 10

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.