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PNPT1


EntrezDescriptionChrom.StrandPromoter
(Start - Stop)
TSS
87178 polyribonucleotide nucleotidyltransferase 1 chr2 -55920545 - 55926045 55921045

Transcription Factor Binding Sites

 
Download all TFBS in the PNPT1 promoter
 
MotifSourceStrandStartStop PValueMatch
Sequence
Overlap w/
Footprints
FOXB1_forkhead_DBD_dimeric_18_1 SELEX - 55921258 55921275 0.0E+00 AAAGTAAATATAAATTTA 18
FOXJ2_forkhead_DBD_dimeric_13_1 SELEX - 55921260 55921272 4.0E-06 GTAAATATAAATT 13
Foxa2_MA0047.2 JASPAR + 55921266 55921277 4.0E-06 TATTTACTTTTA 12
MSX2_homeodomain_DBD_dimeric_18_1 SELEX + 55921115 55921132 9.0E-06 CCTATCAGAACGCGATTA 18
YY2_C2H2_full_dimeric_12_1 SELEX + 55920947 55920958 8.0E-06 GCAGGCCGCCAT 12
FOXA1_MA0148.1 JASPAR + 55921266 55921276 6.0E-06 TATTTACTTTT 11
PROX1_PROX_DBD_dimeric_12_1 SELEX + 55920754 55920765 8.0E-06 CAAGACACCTTA 12
EMX2_homeodomain_DBD_dimeric_14_1 SELEX + 55921172 55921185 1.0E-06 CAATTAGATAAATA 14
EMX2_homeodomain_DBD_dimeric_14_1 SELEX - 55921172 55921185 3.0E-06 TATTTATCTAATTG 14
FOXF2_MA0030.1 JASPAR - 55921264 55921277 7.0E-06 TAAAAGTAAATATA 14
MEF2D_MADS_DBD_dimeric_12_1 SELEX + 55922262 55922273 2.0E-06 ACTAAAAATACA 12
FOXC2_forkhead_DBD_monomeric_12_1 SELEX - 55921264 55921275 1.0E-06 AAAGTAAATATA 12
LHX2_homeodomain_DBD_dimeric_15_1 SELEX + 55921172 55921186 1.0E-05 CAATTAGATAAATAA 15
LHX2_homeodomain_DBD_dimeric_15_1 SELEX - 55921172 55921186 4.0E-06 TTATTTATCTAATTG 15
FOXL1_forkhead_full_dimeric_13_1 SELEX + 55921174 55921186 9.0E-06 ATTAGATAAATAA 13
FOXC1_forkhead_DBD_monomeric_11_1 SELEX + 55921176 55921186 8.0E-06 TAGATAAATAA 11
FOXC1_forkhead_DBD_monomeric_11_1 SELEX - 55921265 55921275 0.0E+00 AAAGTAAATAT 11
NFYA_MA0060.1 JASPAR - 55920989 55921004 2.0E-06 GTGAGCCAATCAGGGC 16
MEF2A_MADS_DBD_dimeric_12_1 SELEX + 55922262 55922273 6.0E-06 ACTAAAAATACA 12
ISX_homeodomain_DBD_dimeric_13_1 SELEX - 55921171 55921183 9.0E-06 TTTATCTAATTGC 13
IRF5_IRF_full_monomeric_11_1 SELEX - 55921033 55921043 7.0E-06 AAACGAAACTC 11
SCRT2_C2H2_DBD_monomeric_13_1 SELEX - 55920794 55920806 1.0E-05 AGGCAACAGGTAA 13
IRF7_IRF_DBD_trimeric_17_1 SELEX - 55921028 55921044 4.0E-06 GAAACGAAACTCCATCA 17
FOXD2_forkhead_DBD_dimeric_14_1 SELEX + 55921260 55921273 1.0E-06 AATTTATATTTACT 14
Pax4_MA0068.1 JASPAR - 55921218 55921247 9.0E-06 TAAACATTTACATTATTCTAGGACTTCTCC 30
MEF2B_MADS_full_dimeric_12_1 SELEX + 55922262 55922273 3.0E-06 ACTAAAAATACA 12
FOXD3_forkhead_DBD_dimeric_14_1 SELEX + 55921260 55921273 3.0E-06 AATTTATATTTACT 14
FOXJ3_forkhead_DBD_dimeric_14_1 SELEX - 55921266 55921279 8.0E-06 ATTAAAAGTAAATA 14
ESR1_MA0112.2 JASPAR + 55922221 55922240 9.0E-06 GACCCAGGGCATCCTGGCCA 20
NR2F1_nuclearreceptor_DBD_dimeric_16_1 SELEX + 55922203 55922218 6.0E-06 TGGATCACGAGGTCAA 16
Msx3_homeodomain_DBD_dimeric_18_1 SELEX + 55921115 55921132 1.0E-05 CCTATCAGAACGCGATTA 18
EMX1_homeodomain_DBD_dimeric_14_1 SELEX + 55921172 55921185 1.0E-06 CAATTAGATAAATA 14
EMX1_homeodomain_DBD_dimeric_14_1 SELEX - 55921172 55921185 3.0E-06 TATTTATCTAATTG 14
MSX1_homeodomain_DBD_dimeric_18_1 SELEX + 55921115 55921132 8.0E-06 CCTATCAGAACGCGATTA 18
FOXC1_forkhead_DBD_dimeric_13_1 SELEX - 55921262 55921274 2.0E-06 AAGTAAATATAAA 13
Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 55921260 55921272 5.0E-06 GTAAATATAAATT 13
FOXB1_forkhead_DBD_monomeric_11_1 SELEX - 55921265 55921275 0.0E+00 AAAGTAAATAT 11
V_FOXP1_01_M00987 TRANSFAC + 55921259 55921278 2.0E-06 AAATTTATATTTACTTTTAA 20
V_MSX3_01_M01341 TRANSFAC + 55921166 55921181 9.0E-06 GAAAGGCAATTAGATA 16
V_DBX1_01_M01483 TRANSFAC + 55921255 55921271 1.0E-06 GAGTAAATTTATATTTA 17
V_FREAC7_01_M00293 TRANSFAC + 55921174 55921189 1.0E-06 ATTAGATAAATAAGGT 16
V_FREAC7_01_M00293 TRANSFAC - 55921262 55921277 2.0E-06 TAAAAGTAAATATAAA 16
V_FOXA2_04_M02749 TRANSFAC - 55921261 55921277 0.0E+00 TAAAAGTAAATATAAAT 17
V_ESR1_01_M02261 TRANSFAC + 55922221 55922240 9.0E-06 GACCCAGGGCATCCTGGCCA 20
V_BCL6_01_M01183 TRANSFAC + 55921260 55921275 8.0E-06 AATTTATATTTACTTT 16
V_MAFB_03_M02879 TRANSFAC - 55921129 55921143 1.0E-05 CGTTTGCAACATAAT 15
V_GCNF_Q3_M02009 TRANSFAC + 55922210 55922219 9.0E-06 CGAGGTCAAG 10
V_EAR2_Q2_M01728 TRANSFAC + 55921142 55921155 1.0E-06 CGATCTTTGTCTTT 14
V_IRF3_05_M02767 TRANSFAC - 55921033 55921046 4.0E-06 CGGAAACGAAACTC 14
V_HNF3_Q6_01_M01012 TRANSFAC - 55921173 55921190 7.0E-06 AACCTTATTTATCTAATT 18
V_HNF3_Q6_01_M01012 TRANSFAC + 55921261 55921278 1.0E-06 ATTTATATTTACTTTTAA 18
V_FOXJ1_03_M02750 TRANSFAC - 55921260 55921275 2.0E-06 AAAGTAAATATAAATT 16
V_HOXA2_01_M01402 TRANSFAC + 55921168 55921183 2.0E-06 AAGGCAATTAGATAAA 16
V_DLX2_01_M01468 TRANSFAC + 55921168 55921183 6.0E-06 AAGGCAATTAGATAAA 16
V_PITX2_Q6_M02114 TRANSFAC + 55922170 55922179 1.0E-06 TGTAATCCCA 10
V_NKX62_Q2_M00489 TRANSFAC - 55921264 55921275 8.0E-06 AAAGTAAATATA 12
V_MEF2A_Q6_M02024 TRANSFAC - 55922262 55922271 4.0E-06 TATTTTTAGT 10
V_BARBIE_01_M00238 TRANSFAC + 55921211 55921225 9.0E-06 ATTTAAAGGAGAAGT 15
V_HOXA6_01_M01392 TRANSFAC + 55921168 55921183 8.0E-06 AAGGCAATTAGATAAA 16
V_RXRA_03_M02791 TRANSFAC - 55922206 55922222 1.0E-06 TCTCTTGACCTCGTGAT 17
V_XFD3_01_M00269 TRANSFAC - 55921262 55921275 1.0E-06 AAAGTAAATATAAA 14
V_RSRFC4_Q2_M00407 TRANSFAC - 55921259 55921275 2.0E-06 AAAGTAAATATAAATTT 17
V_RSRFC4_Q2_M00407 TRANSFAC + 55922260 55922276 1.0E-05 CTACTAAAAATACAAAA 17
V_HOXB6_01_M01460 TRANSFAC - 55921168 55921183 8.0E-06 TTTATCTAATTGCCTT 16
V_HNF3A_01_M01261 TRANSFAC - 55921265 55921274 5.0E-06 AAGTAAATAT 10
V_HNF3_Q6_M00791 TRANSFAC - 55921264 55921276 2.0E-06 AAAAGTAAATATA 13
V_HNF3ALPHA_Q6_M00724 TRANSFAC + 55921266 55921276 3.0E-06 TATTTACTTTT 11
V_HMX1_01_M00433 TRANSFAC - 55920850 55920859 5.0E-06 CAAGTGCGAG 10
V_HNF1_Q6_01_M01011 TRANSFAC - 55921253 55921273 7.0E-06 AGTAAATATAAATTTACTCTG 21
V_HNF1_Q6_01_M01011 TRANSFAC - 55921257 55921277 5.0E-06 TAAAAGTAAATATAAATTTAC 21
V_ISRE_01_M00258 TRANSFAC + 55921033 55921047 2.0E-06 GAGTTTCGTTTCCGC 15
V_OCT1_04_M00138 TRANSFAC - 55921254 55921276 5.0E-06 AAAAGTAAATATAAATTTACTCT 23
V_MEF2_04_M00233 TRANSFAC + 55922256 55922277 7.0E-06 GTCTCTACTAAAAATACAAAAA 22
V_IRF4_03_M02768 TRANSFAC - 55921031 55921045 7.0E-06 GGAAACGAAACTCCA 15
V_XFD2_01_M00268 TRANSFAC - 55921262 55921275 4.0E-06 AAAGTAAATATAAA 14
V_NCX_02_M01420 TRANSFAC + 55921255 55921271 5.0E-06 GAGTAAATTTATATTTA 17
V_ISGF3G_03_M02771 TRANSFAC - 55921032 55921046 4.0E-06 CGGAAACGAAACTCC 15
V_TBP_06_M02814 TRANSFAC + 55921256 55921271 5.0E-06 AGTAAATTTATATTTA 16
V_TBP_06_M02814 TRANSFAC - 55921258 55921273 2.0E-06 AGTAAATATAAATTTA 16
V_FREAC2_01_M00290 TRANSFAC - 55921262 55921277 5.0E-06 TAAAAGTAAATATAAA 16
V_BARHL1_01_M01332 TRANSFAC + 55921166 55921181 9.0E-06 GAAAGGCAATTAGATA 16
V_FOXL1_04_M02753 TRANSFAC + 55921174 55921190 5.0E-06 ATTAGATAAATAAGGTT 17
V_FOXL1_04_M02753 TRANSFAC - 55921261 55921277 0.0E+00 TAAAAGTAAATATAAAT 17
V_NFY_01_M00287 TRANSFAC - 55920989 55921004 1.0E-06 GTGAGCCAATCAGGGC 16
V_FOXA2_03_M02260 TRANSFAC + 55921266 55921277 4.0E-06 TATTTACTTTTA 12
V_PITX2_Q2_M00482 TRANSFAC + 55922170 55922180 1.0E-06 TGTAATCCCAG 11
V_FOX_Q2_M00809 TRANSFAC + 55921263 55921275 2.0E-06 TTATATTTACTTT 13
V_RSRFC4_01_M00026 TRANSFAC + 55921260 55921275 4.0E-06 AATTTATATTTACTTT 16
V_PLZF_02_M01075 TRANSFAC - 55921255 55921283 6.0E-06 TAGTATTAAAAGTAAATATAAATTTACTC 29
V_HFH3_01_M00289 TRANSFAC + 55921263 55921275 3.0E-06 TTATATTTACTTT 13
V_FOXJ2_01_M00422 TRANSFAC - 55921261 55921278 0.0E+00 TTAAAAGTAAATATAAAT 18
V_SATB1_01_M01232 TRANSFAC - 55921275 55921286 9.0E-06 TTCTAGTATTAA 12
V_MOX1_01_M01443 TRANSFAC + 55921168 55921183 3.0E-06 AAGGCAATTAGATAAA 16
V_BSX_01_M01442 TRANSFAC + 55921168 55921183 0.0E+00 AAGGCAATTAGATAAA 16
V_HOXD3_01_M01338 TRANSFAC - 55921168 55921183 6.0E-06 TTTATCTAATTGCCTT 16
V_LHX4_01_M01421 TRANSFAC - 55921166 55921182 5.0E-06 TTATCTAATTGCCTTTC 17
V_NFYA_Q5_M02106 TRANSFAC - 55920989 55921002 2.0E-06 GAGCCAATCAGGGC 14
V_BARX1_01_M01340 TRANSFAC + 55921168 55921183 4.0E-06 AAGGCAATTAGATAAA 16
V_SOX5_04_M02910 TRANSFAC + 55921204 55921218 4.0E-06 TATCGTAATTTAAAG 15
V_FOXK1_03_M02752 TRANSFAC - 55921261 55921277 1.0E-06 TAAAAGTAAATATAAAT 17
V_HOXB5_01_M01319 TRANSFAC + 55921168 55921183 7.0E-06 AAGGCAATTAGATAAA 16
V_HOX13_02_M01452 TRANSFAC + 55921168 55921183 2.0E-06 AAGGCAATTAGATAAA 16
V_IPF1_06_M01438 TRANSFAC + 55921168 55921183 8.0E-06 AAGGCAATTAGATAAA 16
Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns.
Developed at the Institute for Systems Biology in the Baliga Lab.
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