Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

TNK1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8711 tyrosine kinase, non-receptor, 1 chr17 + 7279292 - 7284792 7284292 Transcription Factor Binding Sites   Download all TFBS in the TNK1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints MYBL2_MYB_DBD_dimeric_16_1 SELEX - 7283852 7283867 7.0E-06 ACAGTTGAAGCTGTTG 16 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX + 7283819 7283830 1.0E-06 TGCCCTGAGGCA 12 TFAP2B_TFAP_DBD_dimeric_12_1 SELEX - 7283819 7283830 1.0E-06 TGCCTCAGGGCA 12 GCM1_GCM_full_monomeric_11_1 SELEX - 7283898 7283908 6.0E-06 GATGCTGGTAC 11 TFAP2C_TFAP_full_dimeric_12_1 SELEX + 7283819 7283830 3.0E-06 TGCCCTGAGGCA 12 TFAP2C_TFAP_full_dimeric_12_1 SELEX - 7283819 7283830 1.0E-06 TGCCTCAGGGCA 12 REST_MA0138.2 JASPAR - 7283678 7283698 6.0E-06 TCCAGGACCTTGAAGAAGGCC 21 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX + 7283819 7283830 1.0E-06 TGCCCTGAGGCA 12 TFAP2A_TFAP_DBD_dimeric_12_1 SELEX - 7283819 7283830 4.0E-06 TGCCTCAGGGCA 12 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX + 7283819 7283830 1.0E-06 TGCCCTGAGGCA 12 Tcfap2a_TFAP_DBD_dimeric_12_1 SELEX - 7283819 7283830 2.0E-06 TGCCTCAGGGCA 12 V_CEBPG_Q6_M00622 TRANSFAC + 7284811 7284823 1.0E-06 CTTATTTAACAAA 13 V_FOXP3_Q4_M00992 TRANSFAC - 7283900 7283916 5.0E-06 GAGATGTTGATGCTGGT 17 V_BTEB3_Q5_M01865 TRANSFAC + 7287659 7287671 5.0E-06 CTGAGGGAGGCTT 13 V_MAX_Q6_M01830 TRANSFAC - 7287763 7287774 7.0E-06 CGGGACACGTGC 12 V_ATF4_Q6_M01864 TRANSFAC + 7287535 7287543 6.0E-06 TACGTCATG 9 V_E4F1_Q6_01_M02091 TRANSFAC - 7287533 7287542 5.0E-06 ATGACGTAGC 10 V_PIT1_01_M01465 TRANSFAC + 7283938 7283954 7.0E-06 GGTTCATTAAGTAAAGC 17 V_HNF4_DR1_Q3_M00764 TRANSFAC + 7283695 7283707 9.0E-06 TGGACTTAGTCCC 13 V_SP3_Q3_M00665 TRANSFAC + 7283726 7283739 5.0E-06 AGCAGTGTGCAGGG 14 V_CACBINDINGPROTEIN_Q6_M00720 TRANSFAC + 7287744 7287752 8.0E-06 GAGGGTGGG 9 V_HDX_01_M01333 TRANSFAC - 7284984 7285000 1.0E-06 CATTTGAAATCAAATCA 17 V_TCFAP2B_03_M02820 TRANSFAC + 7283818 7283831 3.0E-06 GTGCCCTGAGGCAT 14 V_TCFAP2B_03_M02820 TRANSFAC - 7283818 7283831 3.0E-06 ATGCCTCAGGGCAC 14 V_REST_02_M02256 TRANSFAC - 7283678 7283698 6.0E-06 TCCAGGACCTTGAAGAAGGCC 21 V_E4F1_Q6_M00694 TRANSFAC + 7287533 7287542 8.0E-06 GCTACGTCAT 10 V_SOX4_01_M01308 TRANSFAC + 7284818 7284825 1.0E-05 AACAAAGG 8

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.