Search TFs or Genes

Construction and Validation

Optimal Promoter Size

Download

Citation and Contact

CBLN1 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 869 cerebellin 1 precursor chr16 - 49315242 - 49320742 49315742 Transcription Factor Binding Sites   Download all TFBS in the CBLN1 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints POU4F2_POU_full_monomeric_16_1 SELEX + 49315706 49315721 2.0E-06 CTGAATTATTGATGCA 16 SP8_C2H2_DBD_monomeric_12_1 SELEX + 49315849 49315860 2.0E-06 GCCACGCCCCCC 12 SP3_C2H2_DBD_monomeric_11_1 SELEX + 49315849 49315859 3.0E-06 GCCACGCCCCC 11 Myc_MA0147.1 JASPAR + 49316361 49316370 7.0E-06 CGCACGTGGT 10 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 49315787 49315797 1.0E-05 GCCCCGCCCCC 11 KLF16_C2H2_DBD_monomeric_11_1 SELEX + 49315849 49315859 1.0E-06 GCCACGCCCCC 11 KLF14_C2H2_DBD_monomeric_14_1 SELEX + 49315848 49315861 1.0E-06 GGCCACGCCCCCCA 14 POU4F3_POU_DBD_monomeric_16_1 SELEX + 49315706 49315721 0.0E+00 CTGAATTATTGATGCA 16 SP1_MA0079.2 JASPAR + 49315788 49315797 7.0E-06 CCCCGCCCCC 10 SP4_C2H2_full_monomeric_17_1 SELEX + 49315784 49315800 4.0E-06 CTGGCCCCGCCCCCGCC 17 SP4_C2H2_full_monomeric_17_1 SELEX + 49315846 49315862 2.0E-06 GAGGCCACGCCCCCCAG 17 SP1_C2H2_DBD_monomeric_11_1 SELEX + 49315849 49315859 5.0E-06 GCCACGCCCCC 11 Klf12_C2H2_DBD_monomeric_15_1 SELEX + 49315848 49315862 9.0E-06 GGCCACGCCCCCCAG 15 POU3F1_POU_DBD_monomeric_12_2 SELEX - 49315707 49315718 9.0E-06 ATCAATAATTCA 12 REST_MA0138.2 JASPAR - 49314399 49314419 0.0E+00 TTCAGCACCACGGACGGGGCC 21 POU4F1_POU_DBD_monomeric_14_1 SELEX + 49315706 49315719 0.0E+00 CTGAATTATTGATG 14 Zfx_MA0146.1 JASPAR + 49315773 49315786 8.0E-06 CGGACCTCGGCCTG 14 Zfx_MA0146.1 JASPAR + 49316332 49316345 8.0E-06 CGGGGCGGGGCCTG 14 V_PREP1_01_M01459 TRANSFAC + 49317083 49317098 9.0E-06 GGGGACCTGTCAGTCA 16 V_E2F4_Q6_M02090 TRANSFAC - 49316490 49316499 1.0E-05 GCGGGAGAGA 10 V_NRSF_Q4_M01028 TRANSFAC + 49314400 49314418 1.0E-06 GCCCCGTCCGTGGTGCTGA 19 V_SREBP2_Q6_M01177 TRANSFAC + 49315917 49315928 5.0E-06 CGGCCACCTGAC 12 V_ZFX_01_M01593 TRANSFAC - 49316333 49316348 2.0E-06 GCGCAGGCCCCGCCCC 16 V_PAX4_03_M00378 TRANSFAC - 49314364 49314375 0.0E+00 AATCCCCACCCC 12 V_IK_Q5_M01169 TRANSFAC + 49316222 49316231 5.0E-06 GTTGGGAGGG 10 V_EBOX_Q6_01_M01034 TRANSFAC + 49315920 49315929 4.0E-06 CCACCTGACC 10 V_SP1_Q6_01_M00931 TRANSFAC - 49315787 49315796 4.0E-06 GGGGCGGGGC 10 V_SP1_Q6_01_M00931 TRANSFAC + 49316333 49316342 4.0E-06 GGGGCGGGGC 10 V_EGR_Q6_M00807 TRANSFAC - 49316119 49316129 6.0E-06 GTGGGGGCGGG 11 V_SP1_03_M02281 TRANSFAC + 49315788 49315797 7.0E-06 CCCCGCCCCC 10 V_AP2_Q6_M00189 TRANSFAC - 49316205 49316216 7.0E-06 CGCCCACAGGCG 12 V_SP1_02_M01303 TRANSFAC - 49315831 49315841 8.0E-06 GGGGCGGGGGC 11 V_NRSE_B_M00325 TRANSFAC - 49314399 49314419 1.0E-06 TTCAGCACCACGGACGGGGCC 21 V_WT1_Q6_01_M02036 TRANSFAC + 49315791 49315800 4.0E-06 CGCCCCCGCC 10 V_MYC_01_M02250 TRANSFAC + 49316361 49316370 7.0E-06 CGCACGTGGT 10 V_ZNF219_01_M01122 TRANSFAC + 49315853 49315864 6.0E-06 CGCCCCCCAGCC 12 V_FOXA2_02_M02853 TRANSFAC - 49315936 49315950 1.0E-05 CCTAATAACAACGGC 15 V_KROX_Q6_M00982 TRANSFAC + 49315789 49315802 0.0E+00 CCCGCCCCCGCCGC 14 V_KROX_Q6_M00982 TRANSFAC + 49315828 49315841 2.0E-06 CCTGCCCCCGCCCC 14 V_KROX_Q6_M00982 TRANSFAC + 49316119 49316132 7.0E-06 CCCGCCCCCACTCG 14 V_SP1_Q6_M00196 TRANSFAC - 49315786 49315798 1.0E-06 CGGGGGCGGGGCC 13 V_SP1_Q6_M00196 TRANSFAC + 49316331 49316343 4.0E-06 GCGGGGCGGGGCC 13 V_MAZ_Q6_01_M02023 TRANSFAC + 49316223 49316236 6.0E-06 TTGGGAGGGGAGCG 14 V_EGR1_Q6_M01873 TRANSFAC - 49315790 49315799 4.0E-06 GCGGGGGCGG 10 V_LEF1_03_M02878 TRANSFAC - 49315707 49315722 5.0E-06 CTGCATCAATAATTCA 16 V_REST_01_M01256 TRANSFAC + 49314395 49314416 2.0E-06 CGGGGGCCCCGTCCGTGGTGCT 22 V_PBX1_05_M01967 TRANSFAC - 49317087 49317100 3.0E-06 CTTGACTGACAGGT 14 V_POU6F1_01_M00465 TRANSFAC - 49315710 49315720 7.0E-06 GCATCAATAAT 11 V_SP4_Q5_M01273 TRANSFAC + 49315832 49315842 7.0E-06 CCCCCGCCCCG 11 V_SP4_Q5_M01273 TRANSFAC - 49316332 49316342 2.0E-06 GCCCCGCCCCG 11 V_ZFP105_04_M02931 TRANSFAC - 49315706 49315722 5.0E-06 CTGCATCAATAATTCAG 17 V_TCF7L2_04_M02922 TRANSFAC - 49315707 49315722 7.0E-06 CTGCATCAATAATTCA 16 V_ZFP206_01_M01742 TRANSFAC - 49316316 49316326 9.0E-06 CGCGCACGCGC 11 V_NRSF_01_M00256 TRANSFAC - 49314399 49314419 0.0E+00 TTCAGCACCACGGACGGGGCC 21 V_REST_02_M02256 TRANSFAC - 49314399 49314419 0.0E+00 TTCAGCACCACGGACGGGGCC 21 V_UF1H3BETA_Q6_M01068 TRANSFAC - 49315787 49315800 2.0E-06 GGCGGGGGCGGGGC 14 V_UF1H3BETA_Q6_M01068 TRANSFAC - 49315826 49315839 5.0E-06 GGCGGGGGCAGGGC 14 V_SP1_Q4_01_M00932 TRANSFAC - 49315786 49315798 1.0E-06 CGGGGGCGGGGCC 13 V_SP1_Q4_01_M00932 TRANSFAC + 49316331 49316343 6.0E-06 GCGGGGCGGGGCC 13

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.