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PTCH2 Entrez Description Chrom. Strand Promoter (Start - Stop) TSS 8643 patched 2 chr1 - 45308116 - 45313616 45308616 Transcription Factor Binding Sites   Download all TFBS in the PTCH2 promoter   Motif Source Strand Start Stop PValue Match Sequence Overlap w/ Footprints KLF16_C2H2_DBD_monomeric_11_1 SELEX - 45309053 45309063 1.0E-05 GCCCCGCCCCC 11 GLI2_C2H2_DBD_monomeric_14_1 SELEX + 45305350 45305363 4.0E-06 GACCACCCAGGCAG 14 GLI2_C2H2_DBD_monomeric_14_1 SELEX + 45309068 45309081 5.0E-06 GACCACCCAGGCTG 14 NFYA_MA0060.1 JASPAR - 45308979 45308994 1.0E-06 CTCAGCCAATGGGAGG 16 Pax4_MA0068.1 JASPAR - 45309209 45309238 1.0E-06 AAAAAAAAAAAAAAAGTGTATCCCTAACAG 30 RFX2_RFX_DBD_dimeric_15_1 SELEX + 45309030 45309044 8.0E-06 CGCTGCTAGGTAACG 15 SP1_MA0079.2 JASPAR - 45309053 45309062 7.0E-06 CCCCGCCCCC 10 ZIC3_C2H2_full_monomeric_15_1 SELEX - 45309045 45309059 6.0E-06 CGCCCCCTGCGGCGC 15 RFX3_RFX_DBD_dimeric_15_1 SELEX + 45309030 45309044 2.0E-06 CGCTGCTAGGTAACG 15 RFX4_RFX_DBD_dimeric_15_1 SELEX + 45309030 45309044 3.0E-06 CGCTGCTAGGTAACG 15 PITX1_homeodomain_full_monomeric_9_1 SELEX - 45312837 45312845 2.0E-06 TTTAATCCT 9 Stat3_MA0144.1 JASPAR + 45312874 45312883 7.0E-06 TGCCAGGAAA 10 FOXO1_forkhead_DBD_putatively-multimeric_12_1 SELEX - 45305276 45305287 8.0E-06 ATTCCCCACATT 12 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 45309224 45309236 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 45309225 45309237 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 45309226 45309238 6.0E-06 AAAAAAAAAAAAA 13 Foxj3_forkhead_DBD_dimeric_13_1 SELEX - 45309227 45309239 6.0E-06 AAAAAAAAAAAAA 13 TBX1_TBX_DBD_dimeric_20_1 SELEX - 45308412 45308431 3.0E-06 ATGTCTGAAGGCAAGTGAGA 20 V_FOXP1_01_M00987 TRANSFAC + 45305381 45305400 0.0E+00 ATATGTGTATGTGCGTGTAT 20 V_FOXP1_01_M00987 TRANSFAC + 45309220 45309239 5.0E-06 ACACTTTTTTTTTTTTTTTT 20 V_OBOX6_01_M01445 TRANSFAC + 45312832 45312846 2.0E-06 ACATAAGGATTAAAT 15 V_DBX1_01_M01483 TRANSFAC - 45309224 45309240 6.0E-06 TAAAAAAAAAAAAAAAA 17 V_OBOX5_05_M03066 TRANSFAC + 45312833 45312849 3.0E-06 CATAAGGATTAAATGAG 17 V_HMGIY_Q3_M01010 TRANSFAC + 45309222 45309236 1.0E-05 ACTTTTTTTTTTTTT 15 V_EVI1_04_M00081 TRANSFAC - 45309224 45309238 6.0E-06 AAAAAAAAAAAAAAA 15 V_EVI1_04_M00081 TRANSFAC - 45309225 45309239 6.0E-06 AAAAAAAAAAAAAAA 15 V_EVI1_04_M00081 TRANSFAC - 45309226 45309240 8.0E-06 TAAAAAAAAAAAAAA 15 V_BCL6_01_M01183 TRANSFAC + 45309223 45309238 2.0E-06 CTTTTTTTTTTTTTTT 16 V_BCL6_01_M01183 TRANSFAC + 45309224 45309239 0.0E+00 TTTTTTTTTTTTTTTT 16 V_GM397_03_M02760 TRANSFAC - 45305393 45305409 9.0E-06 CAGATGTGCATACACGC 17 V_SP1_Q6_01_M00931 TRANSFAC + 45309054 45309063 4.0E-06 GGGGCGGGGC 10 V_GLI1_Q2_M01042 TRANSFAC + 45305350 45305359 3.0E-06 GACCACCCAG 10 V_GLI1_Q2_M01042 TRANSFAC + 45309068 45309077 3.0E-06 GACCACCCAG 10 V_GLI1_01_M01702 TRANSFAC + 45305350 45305360 2.0E-06 GACCACCCAGG 11 V_GLI1_01_M01702 TRANSFAC + 45309068 45309078 2.0E-06 GACCACCCAGG 11 V_SP1_03_M02281 TRANSFAC - 45309053 45309062 7.0E-06 CCCCGCCCCC 10 V_NFY_Q6_01_M00775 TRANSFAC - 45308983 45308995 9.0E-06 CCTCAGCCAATGG 13 V_TCFAP2E_04_M02926 TRANSFAC - 45309223 45309236 4.0E-06 AAAAAAAAAAAAAG 14 V_TCFAP2E_04_M02926 TRANSFAC - 45309224 45309237 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 45309225 45309238 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 45309226 45309239 1.0E-06 AAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 45309227 45309240 0.0E+00 TAAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 45309228 45309241 1.0E-06 TTAAAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 45309230 45309243 6.0E-06 TCTTAAAAAAAAAA 14 V_TCFAP2E_04_M02926 TRANSFAC - 45309231 45309244 1.0E-06 GTCTTAAAAAAAAA 14 V_CP2_02_M00947 TRANSFAC + 45308406 45308420 6.0E-06 GCTGGCTCTCACTTG 15 V_ELF4_04_M02850 TRANSFAC - 45309222 45309238 8.0E-06 AAAAAAAAAAAAAAAGT 17 V_ELF4_04_M02850 TRANSFAC - 45309224 45309240 4.0E-06 TAAAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 45309225 45309241 1.0E-06 TTAAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 45309226 45309242 0.0E+00 CTTAAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 45309227 45309243 0.0E+00 TCTTAAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 45309228 45309244 1.0E-06 GTCTTAAAAAAAAAAAA 17 V_ELF4_04_M02850 TRANSFAC - 45309229 45309245 3.0E-06 CGTCTTAAAAAAAAAAA 17 V_GLI3_02_M01704 TRANSFAC + 45305350 45305360 2.0E-06 GACCACCCAGG 11 V_GLI3_02_M01704 TRANSFAC + 45309068 45309078 2.0E-06 GACCACCCAGG 11 V_GC_01_M00255 TRANSFAC + 45309052 45309065 2.0E-06 AGGGGGCGGGGCGG 14 V_OBOX5_02_M01480 TRANSFAC + 45312833 45312849 3.0E-06 CATAAGGATTAAATGAG 17 V_ZIC3_01_M00450 TRANSFAC - 45305350 45305358 6.0E-06 TGGGTGGTC 9 V_ZIC3_01_M00450 TRANSFAC - 45309068 45309076 6.0E-06 TGGGTGGTC 9 V_ZFP105_03_M02827 TRANSFAC - 45309221 45309235 1.0E-06 AAAAAAAAAAAAGTG 15 V_ZFP105_03_M02827 TRANSFAC - 45309222 45309236 2.0E-06 AAAAAAAAAAAAAGT 15 V_ZFP105_03_M02827 TRANSFAC - 45309223 45309237 0.0E+00 AAAAAAAAAAAAAAG 15 V_ZFP105_03_M02827 TRANSFAC - 45309224 45309238 0.0E+00 AAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 45309225 45309239 0.0E+00 AAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 45309226 45309240 0.0E+00 TAAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 45309227 45309241 0.0E+00 TTAAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 45309228 45309242 1.0E-06 CTTAAAAAAAAAAAA 15 V_ZFP105_03_M02827 TRANSFAC - 45309229 45309243 9.0E-06 TCTTAAAAAAAAAAA 15 V_SP1_Q6_M00196 TRANSFAC + 45309052 45309064 0.0E+00 AGGGGGCGGGGCG 13 V_EVI1_01_M00078 TRANSFAC + 45312838 45312853 8.0E-06 GGATTAAATGAGATAA 16 V_MAZ_Q6_01_M02023 TRANSFAC + 45309123 45309136 2.0E-06 GGAGGAGGGAGGGG 14 V_IRF3_06_M02871 TRANSFAC + 45309187 45309200 1.0E-05 TGAGAAAGGGCCTT 14 V_SP1SP3_Q4_M01219 TRANSFAC - 45309050 45309060 8.0E-06 CCGCCCCCTGC 11 V_RREB1_01_M00257 TRANSFAC - 45305367 45305380 1.0E-05 CCCCACCCACACCA 14 V_RREB1_01_M00257 TRANSFAC - 45308742 45308755 8.0E-06 ACCCACACCCCACA 14 V_ZIC1_01_M00448 TRANSFAC - 45305350 45305358 6.0E-06 TGGGTGGTC 9 V_ZIC1_01_M00448 TRANSFAC - 45309068 45309076 6.0E-06 TGGGTGGTC 9 V_STAT3_03_M01595 TRANSFAC + 45312872 45312887 9.0E-06 AGTGCCAGGAAAAGTG 16 V_GLI3_01_M01596 TRANSFAC - 45305349 45305359 1.0E-06 CTGGGTGGTCC 11 V_GLI3_01_M01596 TRANSFAC - 45309067 45309077 0.0E+00 CTGGGTGGTCT 11 V_SP4_Q5_M01273 TRANSFAC - 45309053 45309063 1.0E-06 GCCCCGCCCCC 11 V_AML2_Q3_01_M01854 TRANSFAC - 45305364 45305374 3.0E-06 CCACACCACTG 11 V_MTF1_06_M02882 TRANSFAC - 45309223 45309236 1.0E-06 AAAAAAAAAAAAAG 14 V_MTF1_06_M02882 TRANSFAC - 45309224 45309237 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 45309225 45309238 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 45309226 45309239 1.0E-06 AAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 45309227 45309240 4.0E-06 TAAAAAAAAAAAAA 14 V_MTF1_06_M02882 TRANSFAC - 45309230 45309243 5.0E-06 TCTTAAAAAAAAAA 14 V_GLI2_01_M01703 TRANSFAC + 45305350 45305360 2.0E-06 GACCACCCAGG 11 V_GLI2_01_M01703 TRANSFAC + 45309068 45309078 2.0E-06 GACCACCCAGG 11 V_FAC1_01_M00456 TRANSFAC - 45309224 45309237 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 45309225 45309238 3.0E-06 AAAAAAAAAAAAAA 14 V_FAC1_01_M00456 TRANSFAC - 45309226 45309239 3.0E-06 AAAAAAAAAAAAAA 14 V_GATA3_02_M00350 TRANSFAC + 45312846 45312855 3.0E-06 TGAGATAATA 10 V_PITX1_01_M01484 TRANSFAC + 45312832 45312848 6.0E-06 ACATAAGGATTAAATGA 17 V_TCF7_04_M02921 TRANSFAC - 45309232 45309246 3.0E-06 CCGTCTTAAAAAAAA 15 V_NFY_01_M00287 TRANSFAC - 45308979 45308994 2.0E-06 CTCAGCCAATGGGAGG 16 V_FPM315_01_M01587 TRANSFAC + 45309117 45309128 1.0E-06 CAGGGAGGAGGA 12 V_FPM315_01_M01587 TRANSFAC + 45309120 45309131 4.0E-06 GGAGGAGGAGGG 12 V_OTX2_01_M01387 TRANSFAC + 45312833 45312849 6.0E-06 CATAAGGATTAAATGAG 17 V_E47_01_M00002 TRANSFAC - 45305561 45305575 8.0E-06 ACAGCAGATGTTTCT 15 V_GATA2_03_M00349 TRANSFAC + 45312846 45312855 7.0E-06 TGAGATAATA 10 V_SRF_06_M02916 TRANSFAC - 45309220 45309236 1.0E-06 AAAAAAAAAAAAAGTGT 17 V_SRF_06_M02916 TRANSFAC - 45309221 45309237 1.0E-06 AAAAAAAAAAAAAAGTG 17 V_SRF_06_M02916 TRANSFAC - 45309222 45309238 0.0E+00 AAAAAAAAAAAAAAAGT 17 V_SRF_06_M02916 TRANSFAC - 45309223 45309239 1.0E-06 AAAAAAAAAAAAAAAAG 17 V_SRF_06_M02916 TRANSFAC - 45309224 45309240 0.0E+00 TAAAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 45309225 45309241 0.0E+00 TTAAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 45309226 45309242 0.0E+00 CTTAAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 45309227 45309243 0.0E+00 TCTTAAAAAAAAAAAAA 17 V_SRF_06_M02916 TRANSFAC - 45309228 45309244 1.0E-06 GTCTTAAAAAAAAAAAA 17 V_GLI_Q2_M01037 TRANSFAC - 45305349 45305360 1.0E-06 CCTGGGTGGTCC 12 V_GLI_Q2_M01037 TRANSFAC - 45309067 45309078 2.0E-06 CCTGGGTGGTCT 12 V_SP1_Q2_01_M00933 TRANSFAC - 45309053 45309062 4.0E-06 CCCCGCCCCC 10 V_UF1H3BETA_Q6_M01068 TRANSFAC + 45305368 45305381 7.0E-06 GGTGTGGGTGGGGA 14 V_NFYA_Q5_M02106 TRANSFAC - 45308979 45308992 1.0E-06 CAGCCAATGGGAGG 14 V_SP1_Q4_01_M00932 TRANSFAC + 45309052 45309064 0.0E+00 AGGGGGCGGGGCG 13 V_TCF11MAFG_01_M00284 TRANSFAC + 45312840 45312861 4.0E-06 ATTAAATGAGATAATACATATG 22 V_OBOX5_01_M01381 TRANSFAC + 45312833 45312849 1.0E-06 CATAAGGATTAAATGAG 17 V_OBOX6_02_M03068 TRANSFAC + 45312832 45312846 2.0E-06 ACATAAGGATTAAAT 15 V_ZIC2_01_M00449 TRANSFAC - 45305350 45305358 6.0E-06 TGGGTGGTC 9 V_ZIC2_01_M00449 TRANSFAC - 45309068 45309076 6.0E-06 TGGGTGGTC 9 V_OTX1_01_M01366 TRANSFAC + 45312833 45312849 6.0E-06 CATAAGGATTAAATGAG 17 V_OBOX6_06_M03067 TRANSFAC - 45312833 45312849 1.0E-06 CTCATTTAATCCTTATG 17 V_MIF1_01_M00279 TRANSFAC + 45309029 45309046 2.0E-06 CCGCTGCTAGGTAACGGC 18 V_NANOG_02_M01247 TRANSFAC - 45309221 45309240 3.0E-06 TAAAAAAAAAAAAAAAAGTG 20 V_NANOG_02_M01247 TRANSFAC - 45309222 45309241 1.0E-06 TTAAAAAAAAAAAAAAAAGT 20 V_NANOG_02_M01247 TRANSFAC - 45309223 45309242 9.0E-06 CTTAAAAAAAAAAAAAAAAG 20 V_NANOG_02_M01247 TRANSFAC - 45309224 45309243 7.0E-06 TCTTAAAAAAAAAAAAAAAA 20

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.